RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 JMYQ8N9B5 988 aa9.98□□□□□ -0.81
VPS36-201ENST00000378060 CPSF1Q10570 1443 aaKnown RBP9.97□□□□□ -0.81
VPS36-201ENST00000378060 NOL10Q9BSC4 688 aaKnown RBP9.97□□□□□ -0.81
VPS36-201ENST00000378060 AIMP1Q12904 312 aaKnown RBP9.97□□□□□ -0.81
VPS36-201ENST00000378060 SSH1Q8WYL5 1049 aa9.97□□□□□ -0.81
VPS36-201ENST00000378060 ERCC4Q92889 916 aaPredicted RBP9.97□□□□□ -0.81
VPS36-201ENST00000378060 TBC1D2Q9BYX2 928 aa9.97□□□□□ -0.81
VPS36-201ENST00000378060 NRKQ7Z2Y5 1582 aa9.96□□□□□ -0.81
VPS36-201ENST00000378060 NOM1Q5C9Z4 860 aaKnown RBP9.96□□□□□ -0.81
VPS36-201ENST00000378060 TNMDQ9H2S6 317 aa9.96□□□□□ -0.81
VPS36-201ENST00000378060 ROBO1Q9Y6N7 1651 aa9.96□□□□□ -0.81
VPS36-201ENST00000378060 ANKARQ7Z5J8 1434 aa9.96□□□□□ -0.81
VPS36-201ENST00000378060 EVA1CP58658 441 aa9.96□□□□□ -0.81
VPS36-201ENST00000378060 LARP1BQ659C4 914 aaKnown RBP9.96□□□□□ -0.81
VPS36-201ENST00000378060 USP6P35125 1406 aa9.96□□□□□ -0.82
VPS36-201ENST00000378060 G3V3G9 751 aa9.96□□□□□ -0.82
VPS36-201ENST00000378060 STK38Q15208 465 aa9.96□□□□□ -0.82
VPS36-201ENST00000378060 DCAF8Q5TAQ9 597 aa9.96□□□□□ -0.82
VPS36-201ENST00000378060 BRMS1Q9HCU9 246 aa9.96□□□□□ -0.82
VPS36-201ENST00000378060 PLEKHG3A1L390 1219 aa9.96□□□□□ -0.82
VPS36-201ENST00000378060 FYB1O15117 783 aa9.96□□□□□ -0.82
VPS36-201ENST00000378060 SART3Q15020 963 aaKnown RBP9.96□□□□□ -0.82
VPS36-201ENST00000378060 CCDC112Q8NEF3 446 aa9.96□□□□□ -0.82
VPS36-201ENST00000378060 AK7Q96M32 723 aa9.96□□□□□ -0.82
VPS36-201ENST00000378060 KIF20BQ96Q89 1820 aa9.95□□□□□ -0.82
VPS36-201ENST00000378060 UBAP1LF5GYI3 381 aa9.95□□□□□ -0.82
VPS36-201ENST00000378060 BLOC1S2Q6QNY1 142 aa9.95□□□□□ -0.82
VPS36-201ENST00000378060 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
VPS36-201ENST00000378060 CWC15Q9P013 229 aaKnown RBP9.95□□□□□ -0.82
VPS36-201ENST00000378060 CDR1P51861 262 aa9.95□□□□□ -0.82
VPS36-201ENST00000378060 KRT32Q14532 448 aa9.95□□□□□ -0.82
VPS36-201ENST00000378060 CFAP45Q9UL16 551 aa9.95□□□□□ -0.82
VPS36-201ENST00000378060 PIK3C2AO00443 1686 aa9.95□□□□□ -0.82
VPS36-201ENST00000378060 FOSBP53539 338 aa9.95□□□□□ -0.82
VPS36-201ENST00000378060 DCCP43146 1447 aa9.95□□□□□ -0.82
VPS36-201ENST00000378060 POLR3AO14802 1390 aaPredicted RBP9.94□□□□□ -0.82
VPS36-201ENST00000378060 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.94□□□□□ -0.82
VPS36-201ENST00000378060 PIP4K2AP48426 406 aaPredicted RBP9.94□□□□□ -0.82
VPS36-201ENST00000378060 FILIP1LQ4L180 1135 aa9.94□□□□□ -0.82
VPS36-201ENST00000378060 RUFY1Q96T51 708 aa9.94□□□□□ -0.82
VPS36-201ENST00000378060 SMC2O95347 1197 aa9.94□□□□□ -0.82
VPS36-201ENST00000378060 RBM10P98175 930 aaKnown RBP9.94□□□□□ -0.82
VPS36-201ENST00000378060 ABTB2Q8N961 1025 aa9.94□□□□□ -0.82
VPS36-201ENST00000378060 CABLES1Q8TDN4 633 aa9.94□□□□□ -0.82
VPS36-201ENST00000378060 TBC1D2BQ9UPU7 963 aa9.94□□□□□ -0.82
VPS36-201ENST00000378060 TTC21BQ7Z4L5 1316 aa9.94□□□□□ -0.82
VPS36-201ENST00000378060 UQCRHLA0A096LP55 91 aa9.94□□□□□ -0.82
VPS36-201ENST00000378060 UQCRHP07919 91 aa9.94□□□□□ -0.82
VPS36-201ENST00000378060 VPS37DQ86XT2 251 aa9.94□□□□□ -0.82
VPS36-201ENST00000378060 CERKQ8TCT0 537 aa9.94□□□□□ -0.82
VPS36-201ENST00000378060 TBC1D32Q96NH3 1257 aa9.94□□□□□ -0.82
VPS36-201ENST00000378060 NLRP2Q9NX02 1062 aa9.94□□□□□ -0.82
VPS36-201ENST00000378060 NCOA3Q9Y6Q9 1424 aa9.94□□□□□ -0.82
VPS36-201ENST00000378060 BMP2KLQ5H9B9 411 aa9.93□□□□□ -0.82
VPS36-201ENST00000378060 PDILTQ8N807 584 aa9.93□□□□□ -0.82
VPS36-201ENST00000378060 PUS7Q96PZ0 661 aaKnown RBP9.93□□□□□ -0.82
VPS36-201ENST00000378060 KRT28Q7Z3Y7 464 aa9.93□□□□□ -0.82
VPS36-201ENST00000378060 PDCL2Q8N4E4 241 aa9.93□□□□□ -0.82
VPS36-201ENST00000378060 SPC24Q8NBT2 197 aa9.93□□□□□ -0.82
VPS36-201ENST00000378060 NUP62CLQ9H1M0 184 aa9.93□□□□□ -0.82
VPS36-201ENST00000378060 VPS53Q5VIR6 699 aa9.93□□□□□ -0.82
VPS36-201ENST00000378060 SMARCE1Q969G3 411 aa9.93□□□□□ -0.82
VPS36-201ENST00000378060 NSD2O96028 1365 aa9.93□□□□□ -0.82
VPS36-201ENST00000378060 SRGAP3O43295 1099 aa9.93□□□□□ -0.82
VPS36-201ENST00000378060 PDRG1Q9NUG6 133 aa9.93□□□□□ -0.82
VPS36-201ENST00000378060 FMNL2Q96PY5 1086 aa9.92□□□□□ -0.82
VPS36-201ENST00000378060 EDC4Q6P2E9 1401 aaKnown RBP9.92□□□□□ -0.82
VPS36-201ENST00000378060 RRS1Q15050 365 aaKnown RBP9.92□□□□□ -0.82
VPS36-201ENST00000378060 SPATA32Q96LK8 384 aa9.92□□□□□ -0.82
VPS36-201ENST00000378060 DNAJC2Q99543 621 aaKnown RBP9.92□□□□□ -0.82
VPS36-201ENST00000378060 MARF1Q9Y4F3 1742 aaKnown RBP9.92□□□□□ -0.82
VPS36-201ENST00000378060 IL16Q14005 1332 aa9.92□□□□□ -0.82
VPS36-201ENST00000378060 RAB11FIP3O75154 756 aa9.92□□□□□ -0.82
VPS36-201ENST00000378060 MCM5P33992 734 aa9.92□□□□□ -0.82
VPS36-201ENST00000378060 CEP57L1Q8IYX8 460 aa9.92□□□□□ -0.82
VPS36-201ENST00000378060 TRPM3Q9HCF6 1732 aaPredicted RBP9.92□□□□□ -0.82
VPS36-201ENST00000378060 SSH2Q76I76 1423 aa9.92□□□□□ -0.82
VPS36-201ENST00000378060 ME1P48163 572 aa9.91□□□□□ -0.82
VPS36-201ENST00000378060 TNPO1Q92973 898 aaKnown RBP9.91□□□□□ -0.82
VPS36-201ENST00000378060 KIF1BPQ96EK5 621 aa9.91□□□□□ -0.82
VPS36-201ENST00000378060 KIF2AO00139 706 aaPredicted RBP9.91□□□□□ -0.82
VPS36-201ENST00000378060 GLRX3O76003 335 aaKnown RBP9.91□□□□□ -0.82
VPS36-201ENST00000378060 DACH1Q9UI36 760 aa9.91□□□□□ -0.82
VPS36-201ENST00000378060 KIF1AQ12756 1690 aa9.91□□□□□ -0.82
VPS36-201ENST00000378060 SYCE3A1L190 88 aa9.91□□□□□ -0.82
VPS36-201ENST00000378060 TRIM27P14373 513 aa9.91□□□□□ -0.82
VPS36-201ENST00000378060 MAP3K11Q16584 847 aa9.91□□□□□ -0.82
VPS36-201ENST00000378060 JAKMIP1Q96N16 626 aaKnown RBP9.91□□□□□ -0.82
VPS36-201ENST00000378060 PXDNQ92626 1479 aa9.91□□□□□ -0.82
VPS36-201ENST00000378060 CBFA2T2O43439 604 aa9.91□□□□□ -0.82
VPS36-201ENST00000378060 MX1P20591 662 aa9.91□□□□□ -0.82
VPS36-201ENST00000378060 SKAP1Q86WV1 359 aa9.91□□□□□ -0.82
VPS36-201ENST00000378060 CCDC158Q5M9N0 1113 aa9.9□□□□□ -0.82
VPS36-201ENST00000378060 SH2B1Q9NRF2 756 aaPredicted RBP9.9□□□□□ -0.82
VPS36-201ENST00000378060 PARD3Q8TEW0 1356 aa9.9□□□□□ -0.82
VPS36-201ENST00000378060 HDAC1Q13547 482 aaPredicted RBP9.9□□□□□ -0.82
VPS36-201ENST00000378060 SCAND2PQ9GZW5 306 aaPredicted RBP9.9□□□□□ -0.82
VPS36-201ENST00000378060 CTNNA3Q9UI47 895 aa9.9□□□□□ -0.82
VPS36-201ENST00000378060 SERPINC1P01008 464 aa9.9□□□□□ -0.83
VPS36-201ENST00000378060 CCDC183Q5T5S1 534 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms