RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 UBE3BQ7Z3V4 1068 aa23.2■■□□□ 1.3
PCDH8-202ENST00000377942 DACH1Q9UI36 760 aa23.2■■□□□ 1.3
PCDH8-202ENST00000377942 USP5P45974 858 aa23.2■■□□□ 1.3
PCDH8-202ENST00000377942 TTF1Q15361 905 aaPredicted RBP23.2■■□□□ 1.3
PCDH8-202ENST00000377942 LDHAL6AQ6ZMR3 332 aa23.2■■□□□ 1.3
PCDH8-202ENST00000377942 DZIP1Q86YF9 867 aaKnown RBP23.2■■□□□ 1.3
PCDH8-202ENST00000377942 DHX8Q14562 1220 aaKnown RBP23.19■■□□□ 1.3
PCDH8-202ENST00000377942 TRIM5Q9C035 493 aa23.19■■□□□ 1.3
PCDH8-202ENST00000377942 MAGEC2Q9UBF1 373 aaPredicted RBP23.19■■□□□ 1.3
PCDH8-202ENST00000377942 NCKAP5LQ9HCH0 1330 aa23.19■■□□□ 1.3
PCDH8-202ENST00000377942 CCDC196A0A1B0GTZ2 297 aa23.19■■□□□ 1.3
PCDH8-202ENST00000377942 GCP02774 474 aa23.19■■□□□ 1.3
PCDH8-202ENST00000377942 PRPF40BQ6NWY9 871 aaKnown RBP23.19■■□□□ 1.3
PCDH8-202ENST00000377942 SH2B1Q9NRF2 756 aaPredicted RBP23.19■■□□□ 1.3
PCDH8-202ENST00000377942 A0A1W2PP64 1363 aa23.19■■□□□ 1.3
PCDH8-202ENST00000377942 CCDC192P0DO97 292 aa23.18■■□□□ 1.3
PCDH8-202ENST00000377942 IL2RBP14784 551 aa23.18■■□□□ 1.3
PCDH8-202ENST00000377942 RNF214Q8ND24 703 aa23.18■■□□□ 1.3
PCDH8-202ENST00000377942 RNF41Q9H4P4 317 aaPredicted RBP23.18■■□□□ 1.3
PCDH8-202ENST00000377942 PLEKHH1Q9ULM0 1364 aa23.18■■□□□ 1.3
PCDH8-202ENST00000377942 IL27Q8NEV9 243 aa23.17■■□□□ 1.3
PCDH8-202ENST00000377942 LRRC59Q96AG4 307 aaKnown RBP23.17■■□□□ 1.3
PCDH8-202ENST00000377942 ATP5J2-PTCD1G3V325 749 aa23.17■■□□□ 1.3
PCDH8-202ENST00000377942 BMP2KLQ5H9B9 411 aa23.17■■□□□ 1.3
PCDH8-202ENST00000377942 POLR3DP05423 398 aaPredicted RBP23.17■■□□□ 1.3
PCDH8-202ENST00000377942 STIM1Q13586 685 aa23.17■■□□□ 1.3
PCDH8-202ENST00000377942 SOS1Q07889 1333 aaPredicted RBP23.17■■□□□ 1.3
PCDH8-202ENST00000377942 DDX46Q7L014 1031 aaKnown RBP23.16■■□□□ 1.3
PCDH8-202ENST00000377942 SPATA32Q96LK8 384 aa23.16■■□□□ 1.3
PCDH8-202ENST00000377942 IP6K1Q92551 441 aa23.16■■□□□ 1.3
PCDH8-202ENST00000377942 ZRANB1Q9UGI0 708 aa23.16■■□□□ 1.3
PCDH8-202ENST00000377942 NPC1L1Q9UHC9 1359 aa23.16■■□□□ 1.3
PCDH8-202ENST00000377942 LDHCP07864 332 aa23.16■■□□□ 1.3
PCDH8-202ENST00000377942 HDAC1Q13547 482 aaPredicted RBP23.16■■□□□ 1.3
PCDH8-202ENST00000377942 DDB1Q16531 1140 aa23.15■■□□□ 1.3
PCDH8-202ENST00000377942 TNMDQ9H2S6 317 aa23.15■■□□□ 1.3
PCDH8-202ENST00000377942 TARBP1Q13395 1621 aaKnown RBP23.15■■□□□ 1.3
PCDH8-202ENST00000377942 CARD14Q9BXL6 1004 aa23.15■■□□□ 1.3
PCDH8-202ENST00000377942 MTHFSDQ2M296 383 aaKnown RBP23.15■■□□□ 1.3
PCDH8-202ENST00000377942 MKNK2Q9HBH9 465 aa23.15■■□□□ 1.3
PCDH8-202ENST00000377942 CHPF2Q9P2E5 772 aa23.15■■□□□ 1.3
PCDH8-202ENST00000377942 KSR2Q6VAB6 950 aa23.15■■□□□ 1.3
PCDH8-202ENST00000377942 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.15■■□□□ 1.3
PCDH8-202ENST00000377942 PDILTQ8N807 584 aa23.15■■□□□ 1.3
PCDH8-202ENST00000377942 RFC4P35249 363 aa23.14■■□□□ 1.3
PCDH8-202ENST00000377942 COL17A1Q9UMD9 1497 aaPredicted RBP23.14■■□□□ 1.29
PCDH8-202ENST00000377942 XAGE3Q8WTP9 111 aa23.14■■□□□ 1.29
PCDH8-202ENST00000377942 SMARCE1Q969G3 411 aa23.14■■□□□ 1.29
PCDH8-202ENST00000377942 MINDY4BA8MYZ0 360 aa23.14■■□□□ 1.29
PCDH8-202ENST00000377942 CT47A1Q5JQC4 288 aaPredicted RBP23.14■■□□□ 1.29
PCDH8-202ENST00000377942 ZNF213O14771 459 aa23.13■■□□□ 1.29
PCDH8-202ENST00000377942 CEP131Q9UPN4 1083 aa23.13■■□□□ 1.29
PCDH8-202ENST00000377942 UQCRFS1P1P0C7P4 283 aa23.13■■□□□ 1.29
PCDH8-202ENST00000377942 HSPA2P54652 639 aa23.13■■□□□ 1.29
PCDH8-202ENST00000377942 NAP1L1P55209 391 aaKnown RBP23.13■■□□□ 1.29
PCDH8-202ENST00000377942 IQCA1Q86XH1 822 aa23.13■■□□□ 1.29
PCDH8-202ENST00000377942 CCDC152Q4G0S7 254 aa23.13■■□□□ 1.29
PCDH8-202ENST00000377942 DCAF5Q96JK2 942 aa23.13■■□□□ 1.29
PCDH8-202ENST00000377942 COPS6Q7L5N1 327 aa23.12■■□□□ 1.29
PCDH8-202ENST00000377942 MRPL50Q8N5N7 158 aaKnown RBP23.12■■□□□ 1.29
PCDH8-202ENST00000377942 BMP2KQ9NSY1 1161 aaPredicted RBP23.12■■□□□ 1.29
PCDH8-202ENST00000377942 MAP3K5Q99683 1374 aa23.12■■□□□ 1.29
PCDH8-202ENST00000377942 CRACR2BQ8N4Y2 399 aaPredicted RBP23.12■■□□□ 1.29
PCDH8-202ENST00000377942 SMC2O95347 1197 aa23.12■■□□□ 1.29
PCDH8-202ENST00000377942 EYA1Q99502 592 aa23.12■■□□□ 1.29
PCDH8-202ENST00000377942 ARID3AQ99856 593 aa23.12■■□□□ 1.29
PCDH8-202ENST00000377942 EDC4Q6P2E9 1401 aaKnown RBP23.11■■□□□ 1.29
PCDH8-202ENST00000377942 HOXC9P31274 260 aa23.11■■□□□ 1.29
PCDH8-202ENST00000377942 RSPH6AQ9H0K4 717 aa23.11■■□□□ 1.29
PCDH8-202ENST00000377942 ANXA1P04083 346 aa23.11■■□□□ 1.29
PCDH8-202ENST00000377942 SPTY2D1Q68D10 685 aaPredicted RBP23.11■■□□□ 1.29
PCDH8-202ENST00000377942 UPF3BQ9BZI7 483 aaKnown RBP23.11■■□□□ 1.29
PCDH8-202ENST00000377942 PRM3Q9NNZ6 103 aa23.1■■□□□ 1.29
PCDH8-202ENST00000377942 MAP3K19Q56UN5 1328 aa23.1■■□□□ 1.29
PCDH8-202ENST00000377942 CCP110O43303 1012 aa23.1■■□□□ 1.29
PCDH8-202ENST00000377942 HMGN5P82970 282 aaKnown RBP23.1■■□□□ 1.29
PCDH8-202ENST00000377942 C8orf58Q8NAV2 365 aa23.1■■□□□ 1.29
PCDH8-202ENST00000377942 CTCFLQ8NI51 663 aaPredicted RBP23.1■■□□□ 1.29
PCDH8-202ENST00000377942 RHPN1Q8TCX5 695 aa23.1■■□□□ 1.29
PCDH8-202ENST00000377942 WWC2Q6AWC2 1192 aa23.1■■□□□ 1.29
PCDH8-202ENST00000377942 ZNF444Q8N0Y2 327 aaPredicted RBP23.09■■□□□ 1.29
PCDH8-202ENST00000377942 FAM43AQ8N2R8 423 aa23.09■■□□□ 1.29
PCDH8-202ENST00000377942 ANKRD44Q8N8A2 993 aa23.09■■□□□ 1.29
PCDH8-202ENST00000377942 ARHGEF5Q12774 1597 aa23.09■■□□□ 1.29
PCDH8-202ENST00000377942 C6orf229H3BNL8 230 aa23.09■■□□□ 1.29
PCDH8-202ENST00000377942 GRM8O00222 908 aa23.09■■□□□ 1.29
PCDH8-202ENST00000377942 CFAP74Q9C0B2 1584 aa23.09■■□□□ 1.29
PCDH8-202ENST00000377942 PER1O15534 1290 aaPredicted RBP23.09■■□□□ 1.29
PCDH8-202ENST00000377942 NBPF6Q5VWK0 638 aa23.09■■□□□ 1.29
PCDH8-202ENST00000377942 NBPF5PQ86XG9 351 aaPredicted RBP23.09■■□□□ 1.29
PCDH8-202ENST00000377942 NBPF4Q96M43 638 aa23.09■■□□□ 1.29
PCDH8-202ENST00000377942 SLC39A6Q13433 755 aa23.08■■□□□ 1.29
PCDH8-202ENST00000377942 TMEM132AQ24JP5 1023 aa23.08■■□□□ 1.29
PCDH8-202ENST00000377942 MNS1Q8NEH6 495 aa23.08■■□□□ 1.29
PCDH8-202ENST00000377942 LINS1Q8NG48 757 aa23.08■■□□□ 1.29
PCDH8-202ENST00000377942 ATP6V1AP38606 617 aa23.08■■□□□ 1.29
PCDH8-202ENST00000377942 CABLES1Q8TDN4 633 aa23.08■■□□□ 1.29
PCDH8-202ENST00000377942 SEC63Q9UGP8 760 aaKnown RBP23.08■■□□□ 1.29
PCDH8-202ENST00000377942 ST5P78524 1137 aa23.08■■□□□ 1.28
PCDH8-202ENST00000377942 LIMCH1Q9UPQ0 1083 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms