RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 GDPD2Q9HCC8 539 aa19.77■□□□□ 0.76
TRIM27-202ENST00000377199 EIF4A1P60842 406 aaKnown RBP19.77■□□□□ 0.75
TRIM27-202ENST00000377199 GPT2Q8TD30 523 aa19.77■□□□□ 0.75
TRIM27-202ENST00000377199 CWC27Q6UX04 472 aaKnown RBP19.76■□□□□ 0.75
TRIM27-202ENST00000377199 AIMP1Q12904 312 aaKnown RBP19.76■□□□□ 0.75
TRIM27-202ENST00000377199 DNAAF4Q8WXU2 420 aa19.76■□□□□ 0.75
TRIM27-202ENST00000377199 ISY1Q9ULR0 285 aaKnown RBP19.76■□□□□ 0.75
TRIM27-202ENST00000377199 IP6K1Q92551 441 aa19.75■□□□□ 0.75
TRIM27-202ENST00000377199 SPG7Q9UQ90 795 aa19.75■□□□□ 0.75
TRIM27-202ENST00000377199 PRIM1P49642 420 aaKnown RBP19.74■□□□□ 0.75
TRIM27-202ENST00000377199 CLEC17AQ6ZS10 378 aa19.74■□□□□ 0.75
TRIM27-202ENST00000377199 DDX54Q8TDD1 881 aaKnown RBP19.74■□□□□ 0.75
TRIM27-202ENST00000377199 SSH3Q8TE77 659 aa19.74■□□□□ 0.75
TRIM27-202ENST00000377199 ORAI2Q96SN7 254 aa19.74■□□□□ 0.75
TRIM27-202ENST00000377199 PA2G4Q9UQ80 394 aaKnown RBP19.74■□□□□ 0.75
TRIM27-202ENST00000377199 SYCE3A1L190 88 aa19.74■□□□□ 0.75
TRIM27-202ENST00000377199 PROSER3Q2NL68 480 aa19.74■□□□□ 0.75
TRIM27-202ENST00000377199 CWF19L2Q2TBE0 894 aaKnown RBP19.74■□□□□ 0.75
TRIM27-202ENST00000377199 CPA1P15085 419 aa19.73■□□□□ 0.75
TRIM27-202ENST00000377199 RNF214Q8ND24 703 aa19.73■□□□□ 0.75
TRIM27-202ENST00000377199 C9orf78Q9NZ63 289 aaPredicted RBP19.73■□□□□ 0.75
TRIM27-202ENST00000377199 CLCN1P35523 988 aa19.73■□□□□ 0.75
TRIM27-202ENST00000377199 ARHGAP23Q9P227 1491 aa19.72■□□□□ 0.75
TRIM27-202ENST00000377199 SLIT1O75093 1534 aa19.72■□□□□ 0.75
TRIM27-202ENST00000377199 C1orf141Q5JVX7 400 aa19.72■□□□□ 0.75
TRIM27-202ENST00000377199 NWD1Q149M9 1564 aa19.72■□□□□ 0.75
TRIM27-202ENST00000377199 BEND3Q5T5X7 828 aa19.71■□□□□ 0.75
TRIM27-202ENST00000377199 RBSNQ9H1K0 784 aa19.71■□□□□ 0.75
TRIM27-202ENST00000377199 STAP2Q9UGK3 403 aa19.71■□□□□ 0.75
TRIM27-202ENST00000377199 MAP3K2Q9Y2U5 619 aa19.71■□□□□ 0.75
TRIM27-202ENST00000377199 TMEM63CQ9P1W3 806 aa19.71■□□□□ 0.75
TRIM27-202ENST00000377199 KIF1BPQ96EK5 621 aa19.71■□□□□ 0.75
TRIM27-202ENST00000377199 PI4K2BQ8TCG2 481 aa19.7■□□□□ 0.74
TRIM27-202ENST00000377199 FAM208AQ9UK61 1670 aaKnown RBP19.69■□□□□ 0.74
TRIM27-202ENST00000377199 ANKLE2Q86XL3 938 aa19.69■□□□□ 0.74
TRIM27-202ENST00000377199 PLEKHO1Q53GL0 409 aaPredicted RBP19.68■□□□□ 0.74
TRIM27-202ENST00000377199 KIAA1211Q6ZU35 1233 aa19.68■□□□□ 0.74
TRIM27-202ENST00000377199 CNTROBQ8N137 903 aa19.68■□□□□ 0.74
TRIM27-202ENST00000377199 SIL1Q9H173 461 aa19.68■□□□□ 0.74
TRIM27-202ENST00000377199 ANKARQ7Z5J8 1434 aa19.68■□□□□ 0.74
TRIM27-202ENST00000377199 RAB11FIP3O75154 756 aa19.68■□□□□ 0.74
TRIM27-202ENST00000377199 GCP02774 474 aa19.68■□□□□ 0.74
TRIM27-202ENST00000377199 ZC3H6P61129 1189 aaKnown RBP19.68■□□□□ 0.74
TRIM27-202ENST00000377199 RASEFQ8IZ41 740 aa19.68■□□□□ 0.74
TRIM27-202ENST00000377199 CCDC173Q0VFZ6 552 aa19.67■□□□□ 0.74
TRIM27-202ENST00000377199 XRN1Q8IZH2 1706 aaKnown RBP19.67■□□□□ 0.74
TRIM27-202ENST00000377199 MCM2P49736 904 aa19.67■□□□□ 0.74
TRIM27-202ENST00000377199 POLA2Q14181 598 aa19.67■□□□□ 0.74
TRIM27-202ENST00000377199 AKAP4Q5JQC9 854 aa19.67■□□□□ 0.74
TRIM27-202ENST00000377199 DIAPH3Q9NSV4 1193 aa19.67■□□□□ 0.74
TRIM27-202ENST00000377199 PIP4K2AP48426 406 aaPredicted RBP19.66■□□□□ 0.74
TRIM27-202ENST00000377199 SLC39A6Q13433 755 aa19.66■□□□□ 0.74
TRIM27-202ENST00000377199 ANKRD24Q8TF21 1146 aa19.66■□□□□ 0.74
TRIM27-202ENST00000377199 CEMIPQ8WUJ3 1361 aa19.66■□□□□ 0.74
TRIM27-202ENST00000377199 MYL6BP14649 208 aa19.66■□□□□ 0.74
TRIM27-202ENST00000377199 BRD1O95696 1058 aa19.65■□□□□ 0.74
TRIM27-202ENST00000377199 ZNF445P59923 1031 aa19.65■□□□□ 0.74
TRIM27-202ENST00000377199 CLASRPQ8N2M8 674 aaKnown RBP19.65■□□□□ 0.74
TRIM27-202ENST00000377199 JARID2Q92833 1246 aaPredicted RBP19.65■□□□□ 0.74
TRIM27-202ENST00000377199 DBF4Q9UBU7 674 aaPredicted RBP19.65■□□□□ 0.74
TRIM27-202ENST00000377199 AXIN2Q9Y2T1 843 aa19.65■□□□□ 0.74
TRIM27-202ENST00000377199 ADCY9O60503 1353 aa19.65■□□□□ 0.74
TRIM27-202ENST00000377199 SGSM2O43147 1006 aa19.65■□□□□ 0.74
TRIM27-202ENST00000377199 HSPA4P34932 840 aa19.65■□□□□ 0.74
TRIM27-202ENST00000377199 ANAPC15P60006 121 aa19.65■□□□□ 0.74
TRIM27-202ENST00000377199 BABAM1Q9NWV8 329 aa19.65■□□□□ 0.74
TRIM27-202ENST00000377199 RNMTO43148 476 aaKnown RBP19.65■□□□□ 0.74
TRIM27-202ENST00000377199 GADD45BO75293 160 aaPredicted RBP19.65■□□□□ 0.74
TRIM27-202ENST00000377199 IFIT2P09913 472 aaKnown RBP19.65■□□□□ 0.74
TRIM27-202ENST00000377199 KCNH5Q8NCM2 988 aa19.65■□□□□ 0.74
TRIM27-202ENST00000377199 SNX14Q9Y5W7 946 aa19.65■□□□□ 0.74
TRIM27-202ENST00000377199 KLHDC4Q8TBB5 520 aa19.64■□□□□ 0.73
TRIM27-202ENST00000377199 CASTP20810 708 aaKnown RBP19.64■□□□□ 0.73
TRIM27-202ENST00000377199 CUL4AQ13619 759 aa19.64■□□□□ 0.73
TRIM27-202ENST00000377199 AACSQ86V21 672 aa19.64■□□□□ 0.73
TRIM27-202ENST00000377199 CCDC8Q9H0W5 538 aaPredicted RBP19.64■□□□□ 0.73
TRIM27-202ENST00000377199 FER1L4A9Z1Z3 1794 aa19.63■□□□□ 0.73
TRIM27-202ENST00000377199 AK2P54819 239 aa19.63■□□□□ 0.73
TRIM27-202ENST00000377199 LRRC37A3O60309 1634 aa19.63■□□□□ 0.73
TRIM27-202ENST00000377199 PRPF40BQ6NWY9 871 aaKnown RBP19.62■□□□□ 0.73
TRIM27-202ENST00000377199 MPNDQ8N594 471 aa19.62■□□□□ 0.73
TRIM27-202ENST00000377199 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.62■□□□□ 0.73
TRIM27-202ENST00000377199 RAD50Q92878 1312 aa19.62■□□□□ 0.73
TRIM27-202ENST00000377199 GIGYF1O75420 1035 aaPredicted RBP19.62■□□□□ 0.73
TRIM27-202ENST00000377199 KCNJ4P48050 445 aa19.62■□□□□ 0.73
TRIM27-202ENST00000377199 PXDNQ92626 1479 aa19.62■□□□□ 0.73
TRIM27-202ENST00000377199 MSNP26038 577 aaKnown RBP19.62■□□□□ 0.73
TRIM27-202ENST00000377199 PTH1RQ03431 593 aa19.62■□□□□ 0.73
TRIM27-202ENST00000377199 DDX17Q92841 729 aaKnown RBP19.61■□□□□ 0.73
TRIM27-202ENST00000377199 LSG1Q9H089 658 aaKnown RBP19.61■□□□□ 0.73
TRIM27-202ENST00000377199 LTN1O94822 1766 aa19.61■□□□□ 0.73
TRIM27-202ENST00000377199 CCDC9Q9Y3X0 531 aaKnown RBP19.6■□□□□ 0.73
TRIM27-202ENST00000377199 USP48Q86UV5 1035 aa19.6■□□□□ 0.73
TRIM27-202ENST00000377199 JAKMIP1Q96N16 626 aaKnown RBP19.6■□□□□ 0.73
TRIM27-202ENST00000377199 MARF1Q9Y4F3 1742 aaKnown RBP19.6■□□□□ 0.73
TRIM27-202ENST00000377199 GLRX3O76003 335 aaKnown RBP19.59■□□□□ 0.73
TRIM27-202ENST00000377199 ADCK5Q3MIX3 580 aa19.59■□□□□ 0.73
TRIM27-202ENST00000377199 HSP90AB4PQ58FF6 505 aa19.59■□□□□ 0.73
TRIM27-202ENST00000377199 SUCLG2Q96I99 432 aa19.59■□□□□ 0.73
TRIM27-202ENST00000377199 NLRP2Q9NX02 1062 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms