RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 C5P01031 1676 aa13.37□□□□□ -0.27
C9orf85-202ENST00000377027 AMPHP49418 695 aa13.37□□□□□ -0.27
C9orf85-202ENST00000377027 TMF1P82094 1093 aa13.37□□□□□ -0.27
C9orf85-202ENST00000377027 NSD3Q9BZ95 1437 aa13.37□□□□□ -0.27
C9orf85-202ENST00000377027 HSP90AB2PQ58FF8 381 aa13.36□□□□□ -0.27
C9orf85-202ENST00000377027 ARSIQ5FYB1 569 aa13.36□□□□□ -0.27
C9orf85-202ENST00000377027 FHDC1Q9C0D6 1143 aaPredicted RBP13.36□□□□□ -0.27
C9orf85-202ENST00000377027 MTFR1LQ9H019 292 aa13.36□□□□□ -0.27
C9orf85-202ENST00000377027 INSRP06213 1382 aa13.35□□□□□ -0.27
C9orf85-202ENST00000377027 HOXB1P14653 301 aaPredicted RBP13.35□□□□□ -0.27
C9orf85-202ENST00000377027 PRIM1P49642 420 aaKnown RBP13.35□□□□□ -0.27
C9orf85-202ENST00000377027 PNPLA7Q6ZV29 1317 aa13.35□□□□□ -0.27
C9orf85-202ENST00000377027 CHD4Q14839 1912 aa13.35□□□□□ -0.27
C9orf85-202ENST00000377027 YY1P25490 414 aa13.34□□□□□ -0.27
C9orf85-202ENST00000377027 ZCRB1Q8TBF4 217 aaKnown RBP13.34□□□□□ -0.27
C9orf85-202ENST00000377027 SYT17Q9BSW7 474 aa13.34□□□□□ -0.27
C9orf85-202ENST00000377027 EMILIN1Q9Y6C2 1016 aa13.34□□□□□ -0.27
C9orf85-202ENST00000377027 FLT4P35916 1363 aa13.33□□□□□ -0.27
C9orf85-202ENST00000377027 TBC1D12O60347 775 aa13.33□□□□□ -0.28
C9orf85-202ENST00000377027 SLC24A1O60721 1099 aa13.33□□□□□ -0.28
C9orf85-202ENST00000377027 KHSRPQ92945 711 aaKnown RBP eCLIP13.33□□□□□ -0.28
C9orf85-202ENST00000377027 MAP3K5Q99683 1374 aa13.32□□□□□ -0.28
C9orf85-202ENST00000377027 KIF24Q5T7B8 1368 aa13.32□□□□□ -0.28
C9orf85-202ENST00000377027 SLC27A3Q5K4L6 730 aa13.31□□□□□ -0.28
C9orf85-202ENST00000377027 SYTL4Q96C24 671 aaPredicted RBP13.31□□□□□ -0.28
C9orf85-202ENST00000377027 UBR3Q6ZT12 1888 aa13.31□□□□□ -0.28
C9orf85-202ENST00000377027 SMG6Q86US8 1419 aaKnown RBP13.3□□□□□ -0.28
C9orf85-202ENST00000377027 CYP27B1O15528 508 aa13.3□□□□□ -0.28
C9orf85-202ENST00000377027 C4BP0C0L5 1744 aa13.3□□□□□ -0.28
C9orf85-202ENST00000377027 MAP3K9P80192 1104 aa13.29□□□□□ -0.28
C9orf85-202ENST00000377027 KCNV2Q8TDN2 545 aa13.29□□□□□ -0.28
C9orf85-202ENST00000377027 ARXQ96QS3 562 aa13.29□□□□□ -0.28
C9orf85-202ENST00000377027 AMIGO3Q86WK7 504 aa13.28□□□□□ -0.28
C9orf85-202ENST00000377027 MARVELD3Q96A59 401 aa13.28□□□□□ -0.28
C9orf85-202ENST00000377027 ARIH1Q9Y4X5 557 aaPredicted RBP13.28□□□□□ -0.28
C9orf85-202ENST00000377027 CGNL1Q0VF96 1302 aa13.28□□□□□ -0.28
C9orf85-202ENST00000377027 DPYSL4O14531 572 aa13.27□□□□□ -0.29
C9orf85-202ENST00000377027 NUDT7P0C024 238 aa13.27□□□□□ -0.29
C9orf85-202ENST00000377027 PCDH11XQ9BZA7 1347 aa13.27□□□□□ -0.29
C9orf85-202ENST00000377027 PCDH11YQ9BZA8 1340 aa13.27□□□□□ -0.29
C9orf85-202ENST00000377027 TATP17735 454 aaPredicted RBP13.26□□□□□ -0.29
C9orf85-202ENST00000377027 CDCA8Q53HL2 280 aa13.26□□□□□ -0.29
C9orf85-202ENST00000377027 RAPGEF4Q8WZA2 1011 aa13.26□□□□□ -0.29
C9orf85-202ENST00000377027 CCNL1Q9UK58 526 aaPredicted RBP13.26□□□□□ -0.29
C9orf85-202ENST00000377027 TIMELESSQ9UNS1 1208 aa13.26□□□□□ -0.29
C9orf85-202ENST00000377027 PALLDQ8WX93 1383 aa13.25□□□□□ -0.29
C9orf85-202ENST00000377027 WASHC2AQ641Q2 1341 aa13.25□□□□□ -0.29
C9orf85-202ENST00000377027 CLSPNQ9HAW4 1339 aa13.25□□□□□ -0.29
C9orf85-202ENST00000377027 COL23A1Q86Y22 540 aaPredicted RBP13.25□□□□□ -0.29
C9orf85-202ENST00000377027 NLGN2Q8NFZ4 835 aa13.25□□□□□ -0.29
C9orf85-202ENST00000377027 SLC16A10Q8TF71 515 aa13.25□□□□□ -0.29
C9orf85-202ENST00000377027 TFCP2L1Q9NZI6 479 aa13.25□□□□□ -0.29
C9orf85-202ENST00000377027 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
C9orf85-202ENST00000377027 EYA1Q99502 592 aa13.24□□□□□ -0.29
C9orf85-202ENST00000377027 COL5A3P25940 1745 aaPredicted RBP13.23□□□□□ -0.29
C9orf85-202ENST00000377027 EVI5O60447 810 aa13.23□□□□□ -0.29
C9orf85-202ENST00000377027 EMP3P54852 163 aa13.23□□□□□ -0.29
C9orf85-202ENST00000377027 SMIM5Q71RC9 77 aa13.23□□□□□ -0.29
C9orf85-202ENST00000377027 ZNF784Q8NCA9 323 aaPredicted RBP13.23□□□□□ -0.29
C9orf85-202ENST00000377027 ARHGEF1Q92888 912 aaKnown RBP13.23□□□□□ -0.29
C9orf85-202ENST00000377027 PCGF6Q9BYE7 350 aa13.23□□□□□ -0.29
C9orf85-202ENST00000377027 HSPA5P11021 654 aaKnown RBP13.22□□□□□ -0.29
C9orf85-202ENST00000377027 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
C9orf85-202ENST00000377027 PIGBQ92521 554 aa13.22□□□□□ -0.29
C9orf85-202ENST00000377027 KIAA1551Q9HCM1 1747 aa13.22□□□□□ -0.29
C9orf85-202ENST00000377027 PPM1GO15355 546 aaPredicted RBP13.21□□□□□ -0.29
C9orf85-202ENST00000377027 EIF4A2Q14240 407 aaKnown RBP13.21□□□□□ -0.29
C9orf85-202ENST00000377027 MSL1Q68DK7 614 aa13.21□□□□□ -0.29
C9orf85-202ENST00000377027 ZNF831Q5JPB2 1677 aa13.21□□□□□ -0.3
C9orf85-202ENST00000377027 VIRMAQ69YN4 1812 aaKnown RBP13.2□□□□□ -0.3
C9orf85-202ENST00000377027 CEP350Q5VT06 3117 aa13.19□□□□□ -0.3
C9orf85-202ENST00000377027 YBX3P16989 372 aaKnown RBP eCLIP13.19□□□□□ -0.3
C9orf85-202ENST00000377027 KDRP35968 1356 aa13.19□□□□□ -0.3
C9orf85-202ENST00000377027 IGSF1Q8N6C5 1336 aa13.18□□□□□ -0.3
C9orf85-202ENST00000377027 MYH14Q7Z406 1995 aaKnown RBP13.18□□□□□ -0.3
C9orf85-202ENST00000377027 ZNF316A6NFI3 1004 aaPredicted RBP13.18□□□□□ -0.3
C9orf85-202ENST00000377027 PHKG2P15735 406 aa13.18□□□□□ -0.3
C9orf85-202ENST00000377027 POLD1P28340 1107 aa13.18□□□□□ -0.3
C9orf85-202ENST00000377027 TNNT2P45379 298 aaPredicted RBP13.18□□□□□ -0.3
C9orf85-202ENST00000377027 PDIA6Q15084 440 aa13.18□□□□□ -0.3
C9orf85-202ENST00000377027 LINC00116Q8NCU8 138 aa13.18□□□□□ -0.3
C9orf85-202ENST00000377027 POLR3GLQ9BT43 218 aa13.18□□□□□ -0.3
C9orf85-202ENST00000377027 LHX6Q9UPM6 363 aa13.18□□□□□ -0.3
C9orf85-202ENST00000377027 KDM6AO15550 1401 aaPredicted RBP13.18□□□□□ -0.3
C9orf85-202ENST00000377027 C4AP0C0L4 1744 aa13.18□□□□□ -0.3
C9orf85-202ENST00000377027 KIF13BQ9NQT8 1826 aa13.18□□□□□ -0.3
C9orf85-202ENST00000377027 SPDYE16A6NNV3 312 aaPredicted RBP13.17□□□□□ -0.3
C9orf85-202ENST00000377027 ITPK1Q13572 414 aa13.17□□□□□ -0.3
C9orf85-202ENST00000377027 POTEGQ6S5H5 508 aa13.17□□□□□ -0.3
C9orf85-202ENST00000377027 SLC4A9Q96Q91 983 aa13.17□□□□□ -0.3
C9orf85-202ENST00000377027 PANK3Q9H999 370 aa13.17□□□□□ -0.3
C9orf85-202ENST00000377027 ASAP1Q9ULH1 1129 aa13.17□□□□□ -0.3
C9orf85-202ENST00000377027 TJP1Q07157 1748 aa13.16□□□□□ -0.3
C9orf85-202ENST00000377027 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
C9orf85-202ENST00000377027 POTEMA6NI47 508 aa13.16□□□□□ -0.3
C9orf85-202ENST00000377027 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
C9orf85-202ENST00000377027 CICQ96RK0 1608 aaPredicted RBP13.16□□□□□ -0.3
C9orf85-202ENST00000377027 PLEKHG2Q9H7P9 1386 aa13.16□□□□□ -0.3
C9orf85-202ENST00000377027 EIF4G2P78344 907 aaKnown RBP eCLIP13.15□□□□□ -0.3
C9orf85-202ENST00000377027 GPR162Q16538 588 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms