RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 A6NJY4 79 aa8.61□□□□□ -1.03
SSX3-203ENST00000376895 PSMA6P60900 246 aaKnown RBP8.61□□□□□ -1.03
SSX3-203ENST00000376895 MTFR1Q15390 333 aa8.61□□□□□ -1.03
SSX3-203ENST00000376895 NBPF15Q8N660 670 aa8.61□□□□□ -1.03
SSX3-203ENST00000376895 MRGPRX2Q96LB1 330 aa8.61□□□□□ -1.03
SSX3-203ENST00000376895 RAB6BQ9NRW1 208 aa8.61□□□□□ -1.03
SSX3-203ENST00000376895 NPR3P17342 541 aa8.6□□□□□ -1.03
SSX3-203ENST00000376895 SMTNP53814 917 aa8.6□□□□□ -1.03
SSX3-203ENST00000376895 FOXK2Q01167 660 aa8.6□□□□□ -1.03
SSX3-203ENST00000376895 TLR1Q15399 786 aa8.6□□□□□ -1.03
SSX3-203ENST00000376895 ECM1Q16610 540 aa8.6□□□□□ -1.03
SSX3-203ENST00000376895 ZNF326Q5BKZ1 582 aaKnown RBP8.6□□□□□ -1.03
SSX3-203ENST00000376895 C16orf46Q6P387 395 aa8.6□□□□□ -1.03
SSX3-203ENST00000376895 RGL4Q8IZJ4 473 aa8.6□□□□□ -1.03
SSX3-203ENST00000376895 STAG2Q8N3U4 1231 aa8.6□□□□□ -1.03
SSX3-203ENST00000376895 MRRFQ96E11 262 aaKnown RBP8.6□□□□□ -1.03
SSX3-203ENST00000376895 AQRO60306 1485 aaKnown RBP eCLIP8.59□□□□□ -1.034e-6■■□□□ 13.4
SSX3-203ENST00000376895 A0A1W2PRU2 124 aa8.59□□□□□ -1.03
SSX3-203ENST00000376895 ADH1AP07327 375 aa8.59□□□□□ -1.03
SSX3-203ENST00000376895 MPSTP25325 297 aa8.59□□□□□ -1.03
SSX3-203ENST00000376895 EMID1Q96A84 441 aaPredicted RBP8.59□□□□□ -1.03
SSX3-203ENST00000376895 BCL11AQ9H165 835 aa8.59□□□□□ -1.03
SSX3-203ENST00000376895 IGF1RP08069 1367 aa8.59□□□□□ -1.03
SSX3-203ENST00000376895 GAPVD1Q14C86 1478 aa8.58□□□□□ -1.04
SSX3-203ENST00000376895 NDUFB5O43674 189 aa8.58□□□□□ -1.04
SSX3-203ENST00000376895 SLC19A1P41440 591 aa8.58□□□□□ -1.04
SSX3-203ENST00000376895 NNTQ13423 1086 aa8.58□□□□□ -1.04
SSX3-203ENST00000376895 COL19A1Q14993 1142 aa8.58□□□□□ -1.04
SSX3-203ENST00000376895 TBCELQ5QJ74 424 aa8.58□□□□□ -1.04
SSX3-203ENST00000376895 C2orf49Q9BVC5 232 aaPredicted RBP8.58□□□□□ -1.04
SSX3-203ENST00000376895 WASF2Q9Y6W5 498 aa8.58□□□□□ -1.04
SSX3-203ENST00000376895 TARBP1Q13395 1621 aaKnown RBP8.58□□□□□ -1.04
SSX3-203ENST00000376895 IL2RAP01589 272 aa8.57□□□□□ -1.04
SSX3-203ENST00000376895 ADD1P35611 737 aaKnown RBP8.57□□□□□ -1.04
SSX3-203ENST00000376895 ALKBH2Q6NS38 261 aa8.57□□□□□ -1.04
SSX3-203ENST00000376895 XAGE2Q96GT9 111 aa8.57□□□□□ -1.04
SSX3-203ENST00000376895 RUSC2Q8N2Y8 1516 aa8.57□□□□□ -1.04
SSX3-203ENST00000376895 ZNF608Q9ULD9 1512 aaPredicted RBP8.57□□□□□ -1.04
SSX3-203ENST00000376895 ALDH1A1P00352 501 aa8.56□□□□□ -1.04
SSX3-203ENST00000376895 ABTB2Q8N961 1025 aa8.56□□□□□ -1.04
SSX3-203ENST00000376895 CNKSR1Q969H4 720 aa8.56□□□□□ -1.04
SSX3-203ENST00000376895 ESYT1Q9BSJ8 1104 aa8.56□□□□□ -1.04
SSX3-203ENST00000376895 RBCK1Q9BYM8 510 aa8.56□□□□□ -1.04
SSX3-203ENST00000376895 KIAA1522Q9P206 1035 aaPredicted RBP8.56□□□□□ -1.04
SSX3-203ENST00000376895 GRIN2BQ13224 1484 aa8.56□□□□□ -1.04
SSX3-203ENST00000376895 CLN3Q13286 438 aa8.55□□□□□ -1.04
SSX3-203ENST00000376895 SPRYD7Q5W111 196 aa8.55□□□□□ -1.04
SSX3-203ENST00000376895 FBXO33Q7Z6M2 555 aa8.55□□□□□ -1.04
SSX3-203ENST00000376895 MYO19Q96H55 970 aa8.55□□□□□ -1.04
SSX3-203ENST00000376895 SAP130Q9H0E3 1048 aa8.55□□□□□ -1.04
SSX3-203ENST00000376895 BRPF3Q9ULD4 1205 aa8.55□□□□□ -1.04
SSX3-203ENST00000376895 CARMIL1Q5VZK9 1371 aa8.55□□□□□ -1.04
SSX3-203ENST00000376895 WDR97A6NE52 1622 aa8.54□□□□□ -1.04
SSX3-203ENST00000376895 CDK2AP1O14519 115 aa8.54□□□□□ -1.04
SSX3-203ENST00000376895 EAPPQ56P03 285 aaPredicted RBP8.54□□□□□ -1.04
SSX3-203ENST00000376895 ZNF697Q5TEC3 545 aa8.54□□□□□ -1.04
SSX3-203ENST00000376895 IFFO2Q5TF58 517 aa8.54□□□□□ -1.04
SSX3-203ENST00000376895 QTRT2Q9H974 415 aaKnown RBP8.54□□□□□ -1.04
SSX3-203ENST00000376895 STIM2Q9P246 746 aa8.54□□□□□ -1.04
SSX3-203ENST00000376895 IQSEC3Q9UPP2 1182 aaPredicted RBP8.54□□□□□ -1.04
SSX3-203ENST00000376895 HIRAP54198 1017 aaPredicted RBP8.53□□□□□ -1.04
SSX3-203ENST00000376895 AAMPQ13685 434 aa8.53□□□□□ -1.04
SSX3-203ENST00000376895 COX20Q5RI15 118 aa8.53□□□□□ -1.04
SSX3-203ENST00000376895 POTEAQ6S8J7 498 aa8.53□□□□□ -1.04
SSX3-203ENST00000376895 SPNS2Q8IVW8 549 aa8.53□□□□□ -1.04
SSX3-203ENST00000376895 CITED4Q96RK1 184 aa8.53□□□□□ -1.04
SSX3-203ENST00000376895 USP3Q9Y6I4 520 aa8.53□□□□□ -1.04
SSX3-203ENST00000376895 LOC105371045A0A1W2PR82 267 aa8.52□□□□□ -1.05
SSX3-203ENST00000376895 SERTM1A2A2V5 107 aa8.52□□□□□ -1.05
SSX3-203ENST00000376895 TNFRSF10BO14763 440 aa8.52□□□□□ -1.05
SSX3-203ENST00000376895 EIF1AXP47813 144 aaKnown RBP8.52□□□□□ -1.05
SSX3-203ENST00000376895 CBLBQ13191 982 aa8.52□□□□□ -1.05
SSX3-203ENST00000376895 TMC7Q7Z402 723 aa8.52□□□□□ -1.05
SSX3-203ENST00000376895 ZNF598Q86UK7 904 aaKnown RBP8.52□□□□□ -1.05
SSX3-203ENST00000376895 NLRP3Q96P20 1036 aa8.52□□□□□ -1.05
SSX3-203ENST00000376895 IGSF5Q9NSI5 407 aa8.52□□□□□ -1.05
SSX3-203ENST00000376895 HRH3Q9Y5N1 445 aa8.52□□□□□ -1.05
SSX3-203ENST00000376895 ERICH3Q5RHP9 1530 aa8.52□□□□□ -1.05
SSX3-203ENST00000376895 MEN1O00255 615 aa8.51□□□□□ -1.05
SSX3-203ENST00000376895 EML1O00423 815 aa8.51□□□□□ -1.05
SSX3-203ENST00000376895 ZIC2O95409 532 aaPredicted RBP8.51□□□□□ -1.05
SSX3-203ENST00000376895 VAMP1P23763 118 aa8.51□□□□□ -1.05
SSX3-203ENST00000376895 BRD2P25440 801 aaKnown RBP8.51□□□□□ -1.05
SSX3-203ENST00000376895 PTGIRP43119 386 aa8.51□□□□□ -1.05
SSX3-203ENST00000376895 FOXC1Q12948 553 aa8.51□□□□□ -1.05
SSX3-203ENST00000376895 TEAD4Q15561 434 aa8.51□□□□□ -1.05
SSX3-203ENST00000376895 Q6ZVU0 165 aa8.51□□□□□ -1.05
SSX3-203ENST00000376895 NGLY1Q96IV0 654 aa8.51□□□□□ -1.05
SSX3-203ENST00000376895 FHDC1Q9C0D6 1143 aaPredicted RBP8.51□□□□□ -1.05
SSX3-203ENST00000376895 CABP1Q9NZU7 370 aa8.51□□□□□ -1.05
SSX3-203ENST00000376895 ZNF232Q9UNY5 417 aa8.51□□□□□ -1.05
SSX3-203ENST00000376895 FHAD1B1AJZ9 1412 aa8.51□□□□□ -1.05
SSX3-203ENST00000376895 P4HBP07237 508 aaKnown RBP8.5□□□□□ -1.05
SSX3-203ENST00000376895 TCF3P15923 654 aa8.5□□□□□ -1.05
SSX3-203ENST00000376895 GTF2E1P29083 439 aaPredicted RBP8.5□□□□□ -1.05
SSX3-203ENST00000376895 SNIP1Q8TAD8 396 aaKnown RBP8.5□□□□□ -1.05
SSX3-203ENST00000376895 TMC1Q8TDI8 760 aa8.5□□□□□ -1.05
SSX3-203ENST00000376895 ITPKCQ96DU7 683 aa8.5□□□□□ -1.05
SSX3-203ENST00000376895 DMRTB1Q96MA1 342 aa8.5□□□□□ -1.05
SSX3-203ENST00000376895 ABCA5Q8WWZ7 1642 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms