RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 HEG1Q9ULI3 1381 aa24.9■■□□□ 1.58
VSX1-202ENST00000376709 NBPF7P0C2Y1 421 aaPredicted RBP24.89■■□□□ 1.58
VSX1-202ENST00000376709 SSH3Q8TE77 659 aa24.89■■□□□ 1.58
VSX1-202ENST00000376709 KDM6AO15550 1401 aaPredicted RBP24.89■■□□□ 1.57
VSX1-202ENST00000376709 PHKG2P15735 406 aa24.88■■□□□ 1.57
VSX1-202ENST00000376709 PPP1R42Q7Z4L9 355 aa24.88■■□□□ 1.57
VSX1-202ENST00000376709 TSHZ3Q63HK5 1081 aa24.88■■□□□ 1.57
VSX1-202ENST00000376709 PRDM11Q9NQV5 511 aa24.88■■□□□ 1.57
VSX1-202ENST00000376709 SALL3Q9BXA9 1300 aa24.88■■□□□ 1.57
VSX1-202ENST00000376709 RBM42Q9BTD8 480 aaKnown RBP24.87■■□□□ 1.57
VSX1-202ENST00000376709 USP26Q9BXU7 913 aa24.87■■□□□ 1.57
VSX1-202ENST00000376709 SCN11AQ9UI33 1791 aa24.87■■□□□ 1.57
VSX1-202ENST00000376709 PRAMEF22A3QJZ6 481 aa24.87■■□□□ 1.57
VSX1-202ENST00000376709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.87■■□□□ 1.57
VSX1-202ENST00000376709 REC8O95072 547 aa24.86■■□□□ 1.57
VSX1-202ENST00000376709 PROSER3Q2NL68 480 aa24.86■■□□□ 1.57
VSX1-202ENST00000376709 MAP3K2Q9Y2U5 619 aa24.86■■□□□ 1.57
VSX1-202ENST00000376709 SRGAP3O43295 1099 aa24.86■■□□□ 1.57
VSX1-202ENST00000376709 HSP90AA1P07900 732 aaKnown RBP24.86■■□□□ 1.57
VSX1-202ENST00000376709 SURF6O75683 361 aaKnown RBP24.85■■□□□ 1.57
VSX1-202ENST00000376709 CD2BP2O95400 341 aaKnown RBP24.85■■□□□ 1.57
VSX1-202ENST00000376709 SLC52A2Q9HAB3 445 aa24.85■■□□□ 1.57
VSX1-202ENST00000376709 HYPKQ9NX55 129 aa24.85■■□□□ 1.57
VSX1-202ENST00000376709 K7ELQ4 463 aaPredicted RBP24.84■■□□□ 1.57
VSX1-202ENST00000376709 POLA2Q14181 598 aa24.84■■□□□ 1.57
VSX1-202ENST00000376709 IFNL2Q8IZJ0 200 aa24.84■■□□□ 1.57
VSX1-202ENST00000376709 ERC2O15083 957 aa24.84■■□□□ 1.57
VSX1-202ENST00000376709 ZNF790Q6PG37 636 aa24.84■■□□□ 1.57
VSX1-202ENST00000376709 KSR2Q6VAB6 950 aa24.84■■□□□ 1.57
VSX1-202ENST00000376709 CYP27B1O15528 508 aa24.83■■□□□ 1.57
VSX1-202ENST00000376709 RAB11FIP3O75154 756 aa24.83■■□□□ 1.57
VSX1-202ENST00000376709 RABEP1Q15276 862 aa24.83■■□□□ 1.57
VSX1-202ENST00000376709 TUBGCP6Q96RT7 1819 aa24.83■■□□□ 1.56
VSX1-202ENST00000376709 SLC39A6Q13433 755 aa24.83■■□□□ 1.56
VSX1-202ENST00000376709 IL1RAPL2Q9NP60 686 aa24.83■■□□□ 1.56
VSX1-202ENST00000376709 ABCA3Q99758 1704 aa24.82■■□□□ 1.56
VSX1-202ENST00000376709 NFATC2IPQ8NCF5 419 aa24.82■■□□□ 1.56
VSX1-202ENST00000376709 C9orf78Q9NZ63 289 aaPredicted RBP24.82■■□□□ 1.56
VSX1-202ENST00000376709 PKD1L3Q7Z443 1732 aa24.82■■□□□ 1.56
VSX1-202ENST00000376709 STAP2Q9UGK3 403 aa24.81■■□□□ 1.56
VSX1-202ENST00000376709 WDR17Q8IZU2 1322 aa24.81■■□□□ 1.56
VSX1-202ENST00000376709 TRIM6-TRIM34B2RNG4 842 aa24.81■■□□□ 1.56
VSX1-202ENST00000376709 ALDH1L1O75891 902 aa24.81■■□□□ 1.56
VSX1-202ENST00000376709 DDX21Q9NR30 783 aaKnown RBP eCLIP24.81■■□□□ 1.56
VSX1-202ENST00000376709 DDX58O95786 925 aaKnown RBP24.8■■□□□ 1.56
VSX1-202ENST00000376709 NHSL1Q5SYE7 1610 aa24.8■■□□□ 1.56
VSX1-202ENST00000376709 PLEKHG2Q9H7P9 1386 aa24.8■■□□□ 1.56
VSX1-202ENST00000376709 RILPL2Q969X0 211 aa24.8■■□□□ 1.56
VSX1-202ENST00000376709 COL5A2P05997 1499 aaPredicted RBP24.79■■□□□ 1.56
VSX1-202ENST00000376709 DDIT3P35638 169 aa24.79■■□□□ 1.56
VSX1-202ENST00000376709 TOM1L2Q6ZVM7 507 aa24.79■■□□□ 1.56
VSX1-202ENST00000376709 AIMP1Q12904 312 aaKnown RBP24.78■■□□□ 1.56
VSX1-202ENST00000376709 RHPN1Q8TCX5 695 aa24.78■■□□□ 1.56
VSX1-202ENST00000376709 KIF1BPQ96EK5 621 aa24.78■■□□□ 1.56
VSX1-202ENST00000376709 AOX1Q06278 1338 aa24.78■■□□□ 1.56
VSX1-202ENST00000376709 DCAF5Q96JK2 942 aa24.78■■□□□ 1.56
VSX1-202ENST00000376709 C5P01031 1676 aa24.78■■□□□ 1.56
VSX1-202ENST00000376709 CWF19L2Q2TBE0 894 aaKnown RBP24.77■■□□□ 1.56
VSX1-202ENST00000376709 HSP90AB4PQ58FF6 505 aa24.77■■□□□ 1.56
VSX1-202ENST00000376709 NUTM1Q86Y26 1132 aa24.77■■□□□ 1.56
VSX1-202ENST00000376709 HDAC5Q9UQL6 1122 aa24.77■■□□□ 1.56
VSX1-202ENST00000376709 MCM4P33991 863 aa24.77■■□□□ 1.56
VSX1-202ENST00000376709 CIZ1Q9ULV3 898 aaPredicted RBP24.77■■□□□ 1.56
VSX1-202ENST00000376709 FOXD4L1Q9NU39 408 aa24.76■■□□□ 1.55
VSX1-202ENST00000376709 MRC1P22897 1456 aa24.76■■□□□ 1.55
VSX1-202ENST00000376709 TTC5Q8N0Z6 440 aa24.76■■□□□ 1.55
VSX1-202ENST00000376709 OS9Q13438 667 aaPredicted RBP24.75■■□□□ 1.55
VSX1-202ENST00000376709 PDIA6Q15084 440 aa24.75■■□□□ 1.55
VSX1-202ENST00000376709 LINS1Q8NG48 757 aa24.75■■□□□ 1.55
VSX1-202ENST00000376709 ESYT1Q9BSJ8 1104 aa24.74■■□□□ 1.55
VSX1-202ENST00000376709 STRN4Q9NRL3 753 aa24.74■■□□□ 1.55
VSX1-202ENST00000376709 MYL6BP14649 208 aa24.74■■□□□ 1.55
VSX1-202ENST00000376709 MTX1Q13505 466 aa24.74■■□□□ 1.55
VSX1-202ENST00000376709 ZNF496Q96IT1 587 aaPredicted RBP24.74■■□□□ 1.55
VSX1-202ENST00000376709 PARP4Q9UKK3 1724 aaKnown RBP24.74■■□□□ 1.55
VSX1-202ENST00000376709 RIC3Q7Z5B4 369 aa24.73■■□□□ 1.55
VSX1-202ENST00000376709 CHMLP26374 656 aa24.73■■□□□ 1.55
VSX1-202ENST00000376709 ST18O60284 1047 aa24.72■■□□□ 1.55
VSX1-202ENST00000376709 GRM8O00222 908 aa24.71■■□□□ 1.55
VSX1-202ENST00000376709 AK9Q5TCS8 1911 aa24.71■■□□□ 1.55
VSX1-202ENST00000376709 CABP4P57796 275 aa24.71■■□□□ 1.55
VSX1-202ENST00000376709 LARP1Q6PKG0 1096 aaKnown RBP24.71■■□□□ 1.55
VSX1-202ENST00000376709 UNC5CLQ8IV45 518 aa24.71■■□□□ 1.55
VSX1-202ENST00000376709 SNRPA1P09661 255 aaKnown RBP24.7■■□□□ 1.55
VSX1-202ENST00000376709 ZCRB1Q8TBF4 217 aaKnown RBP24.7■■□□□ 1.55
VSX1-202ENST00000376709 CARD10Q9BWT7 1032 aa24.7■■□□□ 1.55
VSX1-202ENST00000376709 NEXNQ0ZGT2 675 aa24.7■■□□□ 1.54
VSX1-202ENST00000376709 FMNL2Q96PY5 1086 aa24.69■■□□□ 1.54
VSX1-202ENST00000376709 PCDH11XQ9BZA7 1347 aa24.69■■□□□ 1.54
VSX1-202ENST00000376709 PCDH11YQ9BZA8 1340 aa24.69■■□□□ 1.54
VSX1-202ENST00000376709 EVA1CP58658 441 aa24.69■■□□□ 1.54
VSX1-202ENST00000376709 PI4K2BQ8TCG2 481 aa24.69■■□□□ 1.54
VSX1-202ENST00000376709 XAGE3Q8WTP9 111 aa24.69■■□□□ 1.54
VSX1-202ENST00000376709 ANO2Q9NQ90 1003 aa24.69■■□□□ 1.54
VSX1-202ENST00000376709 MCCP23508 829 aa24.68■■□□□ 1.54
VSX1-202ENST00000376709 RAB3GAP1Q15042 981 aa24.68■■□□□ 1.54
VSX1-202ENST00000376709 TNPO1Q92973 898 aaKnown RBP24.68■■□□□ 1.54
VSX1-202ENST00000376709 DDX11L8A8MPP1 907 aa24.67■■□□□ 1.54
VSX1-202ENST00000376709 IL2RBP14784 551 aa24.67■■□□□ 1.54
VSX1-202ENST00000376709 COPS6Q7L5N1 327 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms