RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ANAPC4Q9UJX5 808 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 MGEA5O60502 916 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 LMBR1Q8WVP7 490 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 ELP1O95163 1332 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 RNF8O76064 485 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 RUFY4Q6ZNE9 571 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 ARMC9Q7Z3E5 817 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 ARHGAP24Q8N264 748 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 STX1AQ16623 288 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 ZC4H2Q9NQZ6 224 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 BCAP29Q9UHQ4 241 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 CEP131Q9UPN4 1083 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 MED4Q9NPJ6 270 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 BRD4O60885 1362 aaPredicted RBP7.62□□□□□ -1.19
UBR4-204ENST00000375254 SRGAP3O43295 1099 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 MAP3K7CLP57077 242 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 SATB1Q01826 763 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 SEC62Q99442 399 aaKnown RBP7.62□□□□□ -1.19
UBR4-204ENST00000375254 LIMCH1Q9UPQ0 1083 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 FSD2A1L4K1 749 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 PDCD2Q16342 344 aaPredicted RBP7.62□□□□□ -1.19
UBR4-204ENST00000375254 FAM200AQ8TCP9 573 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 CWC25Q9NXE8 425 aaPredicted RBP7.62□□□□□ -1.19
UBR4-204ENST00000375254 GIGYF1O75420 1035 aaPredicted RBP7.62□□□□□ -1.19
UBR4-204ENST00000375254 SART3Q15020 963 aaKnown RBP7.62□□□□□ -1.19
UBR4-204ENST00000375254 NBPF6Q5VWK0 638 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 NBPF5PQ86XG9 351 aaPredicted RBP7.62□□□□□ -1.19
UBR4-204ENST00000375254 NBPF4Q96M43 638 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 TBC1D32Q96NH3 1257 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 RAI14Q9P0K7 980 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 SMIM24O75264 130 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 STK38Q15208 465 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 STMN2Q93045 179 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 Q9H521 79 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 PANK3Q9H999 370 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 CCDC129Q6ZRS4 1044 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 HYPKQ9NX55 129 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 SREK1Q8WXA9 508 aaKnown RBP7.62□□□□□ -1.19
UBR4-204ENST00000375254 PPP1R9BQ96SB3 815 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 SELENOOQ9BVL4 669 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 KRT83P78385 493 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 ATL3Q6DD88 541 aa7.62□□□□□ -1.19
UBR4-204ENST00000375254 NDUFAB1O14561 156 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 AFAP1L1Q8TED9 768 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 DDX27Q96GQ7 796 aaKnown RBP7.61□□□□□ -1.19
UBR4-204ENST00000375254 L3MBTL2Q969R5 705 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 GRIPAP1Q4V328 841 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 WWC2Q6AWC2 1192 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 GPR161Q8N6U8 529 aaKnown RBP7.61□□□□□ -1.19
UBR4-204ENST00000375254 CFDP1Q9UEE9 299 aaPredicted RBP7.61□□□□□ -1.19
UBR4-204ENST00000375254 PHAXQ9H814 394 aaKnown RBP7.61□□□□□ -1.19
UBR4-204ENST00000375254 BATF3Q9NR55 127 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 PDZRN3Q9UPQ7 1066 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 CCDC7Q96M83 1385 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 CCDC160A6NGH7 325 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 ZFXP17010 805 aaPredicted RBP7.61□□□□□ -1.19
UBR4-204ENST00000375254 WHAMMQ8TF30 809 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 MIS12Q9H081 205 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 VPS18Q9P253 973 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 IMPACTQ9P2X3 320 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 DAAM1Q9Y4D1 1078 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 HMGB3O15347 200 aaKnown RBP7.61□□□□□ -1.19
UBR4-204ENST00000375254 RABGAP1Q9Y3P9 1069 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 ZNF445P59923 1031 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 ODF2LQ9ULJ1 636 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 CASTP20810 708 aaKnown RBP7.61□□□□□ -1.19
UBR4-204ENST00000375254 PEX19P40855 299 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 TAF7Q15545 349 aaPredicted RBP7.61□□□□□ -1.19
UBR4-204ENST00000375254 ARHGAP18Q8N392 663 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 MYO1BO43795 1136 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 HIP1RO75146 1068 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 MPHOSPH8Q99549 860 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 CIB2O75838 187 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 MAP4K4O95819 1239 aaPredicted RBP7.61□□□□□ -1.19
UBR4-204ENST00000375254 SF3B2Q13435 895 aaKnown RBP7.61□□□□□ -1.19
UBR4-204ENST00000375254 CCDC97Q96F63 343 aaPredicted RBP7.61□□□□□ -1.19
UBR4-204ENST00000375254 FIBPO43427 364 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 EXOC4Q96A65 974 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 RUNDC1Q96C34 613 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 CTNNA3Q9UI47 895 aa7.61□□□□□ -1.19
UBR4-204ENST00000375254 PAIP2BQ9ULR5 123 aaKnown RBP7.6□□□□□ -1.19
UBR4-204ENST00000375254 WASF1Q92558 559 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 DDX23Q9BUQ8 820 aaKnown RBP7.6□□□□□ -1.19
UBR4-204ENST00000375254 TRMT1Q9NXH9 659 aaKnown RBP7.6□□□□□ -1.19
UBR4-204ENST00000375254 MXRA7P84157 204 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 RAD50Q92878 1312 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 DESP17661 470 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 RASIP1Q5U651 963 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 TUBB6Q9BUF5 446 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 MMS22LQ6ZRQ5 1243 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 FAM177A1Q8N128 213 aaPredicted RBP7.6□□□□□ -1.19
UBR4-204ENST00000375254 TAOK2Q9UL54 1235 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 DHX29Q7Z478 1369 aaKnown RBP7.6□□□□□ -1.19
UBR4-204ENST00000375254 CREB3O43889 395 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 CCHCR1Q8TD31 782 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 SMC5Q8IY18 1101 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 PNISRQ8TF01 805 aaKnown RBP7.6□□□□□ -1.19
UBR4-204ENST00000375254 SMC6Q96SB8 1091 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 GOLGA6CA6NDK9 693 aa7.6□□□□□ -1.19
UBR4-204ENST00000375254 GOLGA6DP0CG33 693 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms