RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 MAP3K10Q02779 954 aa8.18□□□□□ -1.1
USP48-202ENST00000374730 CCDC102BQ68D86 513 aa8.18□□□□□ -1.1
USP48-202ENST00000374730 FIGNL1Q6PIW4 674 aa8.18□□□□□ -1.1
USP48-202ENST00000374730 LYPD4Q6UWN0 246 aa8.18□□□□□ -1.1
USP48-202ENST00000374730 NLRP8Q86W28 1048 aa8.18□□□□□ -1.1
USP48-202ENST00000374730 SIX5Q8N196 739 aa8.18□□□□□ -1.1
USP48-202ENST00000374730 CALR3Q96L12 384 aaKnown RBP8.18□□□□□ -1.1
USP48-202ENST00000374730 CABP1Q9NZU7 370 aa8.18□□□□□ -1.1
USP48-202ENST00000374730 ATXN7L1Q9ULK2 861 aaPredicted RBP8.18□□□□□ -1.1
USP48-202ENST00000374730 KIAA1024Q9UPX6 916 aa8.18□□□□□ -1.1
USP48-202ENST00000374730 MAFBQ9Y5Q3 323 aaPredicted RBP8.18□□□□□ -1.1
USP48-202ENST00000374730 RNF225M0QZC1 329 aaPredicted RBP8.17□□□□□ -1.1
USP48-202ENST00000374730 TATP17735 454 aaPredicted RBP8.17□□□□□ -1.1
USP48-202ENST00000374730 OGFOD1Q8N543 542 aa8.17□□□□□ -1.1
USP48-202ENST00000374730 LRRC4BQ9NT99 713 aa8.17□□□□□ -1.1
USP48-202ENST00000374730 NDFIP2Q9NV92 336 aa8.17□□□□□ -1.1
USP48-202ENST00000374730 TFIP11Q9UBB9 837 aaKnown RBP8.17□□□□□ -1.1
USP48-202ENST00000374730 KCNMA1Q12791 1236 aa8.16□□□□□ -1.1
USP48-202ENST00000374730 TEAD4Q15561 434 aa8.16□□□□□ -1.1
USP48-202ENST00000374730 AIDAQ96BJ3 306 aa8.16□□□□□ -1.1
USP48-202ENST00000374730 SLC9A9Q8IVB4 645 aa8.15□□□□□ -1.1
USP48-202ENST00000374730 PPP1R12CQ9BZL4 782 aa8.15□□□□□ -1.1
USP48-202ENST00000374730 ENAMQ9NRM1 1142 aa8.15□□□□□ -1.1
USP48-202ENST00000374730 BCRP11274 1271 aa8.14□□□□□ -1.11
USP48-202ENST00000374730 TNS4Q8IZW8 715 aa8.14□□□□□ -1.11
USP48-202ENST00000374730 ZDHHC1Q8WTX9 485 aa8.14□□□□□ -1.11
USP48-202ENST00000374730 ACDQ96AP0 544 aa8.14□□□□□ -1.11
USP48-202ENST00000374730 ABHD17AQ96GS6 310 aa8.14□□□□□ -1.11
USP48-202ENST00000374730 RBM19Q9Y4C8 960 aaKnown RBP8.14□□□□□ -1.11
USP48-202ENST00000374730 PCDHGC4Q9Y5F7 938 aa8.14□□□□□ -1.11
USP48-202ENST00000374730 GPC6Q9Y625 555 aaPredicted RBP8.14□□□□□ -1.11
USP48-202ENST00000374730 A0A1W2PNR3 127 aa8.13□□□□□ -1.11
USP48-202ENST00000374730 BNIP3LO60238 219 aa8.13□□□□□ -1.11
USP48-202ENST00000374730 DKK1O94907 266 aa8.13□□□□□ -1.11
USP48-202ENST00000374730 FGFR3P22607 806 aa8.13□□□□□ -1.11
USP48-202ENST00000374730 ARSJQ5FYB0 599 aaPredicted RBP8.13□□□□□ -1.11
USP48-202ENST00000374730 POTEAQ6S8J7 498 aa8.13□□□□□ -1.11
USP48-202ENST00000374730 L3MBTL2Q969R5 705 aa8.13□□□□□ -1.11
USP48-202ENST00000374730 ZNF594Q96JF6 807 aaPredicted RBP8.13□□□□□ -1.11
USP48-202ENST00000374730 ZIC5Q96T25 663 aa8.13□□□□□ -1.11
USP48-202ENST00000374730 OXCT2Q9BYC2 517 aaPredicted RBP8.13□□□□□ -1.11
USP48-202ENST00000374730 ZCCHC2Q9C0B9 1178 aaKnown RBP8.13□□□□□ -1.11
USP48-202ENST00000374730 RASA1P20936 1047 aa8.12□□□□□ -1.11
USP48-202ENST00000374730 NOS2P35228 1153 aa8.12□□□□□ -1.11
USP48-202ENST00000374730 PSMA6P60900 246 aaKnown RBP8.12□□□□□ -1.11
USP48-202ENST00000374730 SAMD5Q5TGI4 173 aa8.12□□□□□ -1.11
USP48-202ENST00000374730 GDF2Q9UK05 429 aaPredicted RBP8.12□□□□□ -1.11
USP48-202ENST00000374730 SERTM1A2A2V5 107 aa8.11□□□□□ -1.11
USP48-202ENST00000374730 EML1O00423 815 aa8.11□□□□□ -1.11
USP48-202ENST00000374730 ATXN7O15265 892 aaPredicted RBP8.11□□□□□ -1.11
USP48-202ENST00000374730 OIP5O43482 229 aa8.11□□□□□ -1.11
USP48-202ENST00000374730 FAM157BP0CG42 384 aa8.11□□□□□ -1.11
USP48-202ENST00000374730 TXLNAP40222 546 aa8.11□□□□□ -1.11
USP48-202ENST00000374730 HIRAP54198 1017 aaPredicted RBP8.11□□□□□ -1.11
USP48-202ENST00000374730 MARSP56192 900 aaKnown RBP8.11□□□□□ -1.11
USP48-202ENST00000374730 KLRG1Q96E93 195 aa8.11□□□□□ -1.11
USP48-202ENST00000374730 SCARF2Q96GP6 870 aaPredicted RBP8.11□□□□□ -1.11
USP48-202ENST00000374730 PARP3Q9Y6F1 533 aa8.11□□□□□ -1.11
USP48-202ENST00000374730 ABCC9O60706 1549 aa8.1□□□□□ -1.11
USP48-202ENST00000374730 FAM196BA6NMK8 535 aa8.1□□□□□ -1.11
USP48-202ENST00000374730 SUPT5HO00267 1087 aaKnown RBP8.1□□□□□ -1.11
USP48-202ENST00000374730 BMP4P12644 408 aa8.1□□□□□ -1.11
USP48-202ENST00000374730 GSK3AP49840 483 aa8.1□□□□□ -1.11
USP48-202ENST00000374730 SEC13P55735 322 aa8.1□□□□□ -1.11
USP48-202ENST00000374730 FAM182BQ5T319 152 aa8.1□□□□□ -1.11
USP48-202ENST00000374730 KANK4Q5T7N3 995 aaPredicted RBP8.1□□□□□ -1.11
USP48-202ENST00000374730 LARP1Q6PKG0 1096 aaKnown RBP8.1□□□□□ -1.11
USP48-202ENST00000374730 GOLGA6L1Q8N7Z2 621 aa8.1□□□□□ -1.11
USP48-202ENST00000374730 TSPAN10Q9H1Z9 355 aaPredicted RBP8.1□□□□□ -1.11
USP48-202ENST00000374730 ZNF232Q9UNY5 417 aa8.1□□□□□ -1.11
USP48-202ENST00000374730 CHMP3Q9Y3E7 222 aa8.1□□□□□ -1.11
USP48-202ENST00000374730 GJA3Q9Y6H8 435 aa8.1□□□□□ -1.11
USP48-202ENST00000374730 SFI1A8K8P3 1242 aa8.09□□□□□ -1.11
USP48-202ENST00000374730 TNP2Q05952 138 aa8.09□□□□□ -1.11
USP48-202ENST00000374730 TBCELQ5QJ74 424 aa8.09□□□□□ -1.11
USP48-202ENST00000374730 BICDL1Q6ZP65 573 aa8.09□□□□□ -1.11
USP48-202ENST00000374730 TSEN2Q8NCE0 465 aaKnown RBP8.09□□□□□ -1.11
USP48-202ENST00000374730 NACADO15069 1562 aa8.09□□□□□ -1.11
USP48-202ENST00000374730 C2CD2LO14523 706 aa8.08□□□□□ -1.12
USP48-202ENST00000374730 MAPTP10636 758 aaKnown RBP8.08□□□□□ -1.12
USP48-202ENST00000374730 LMOD1P29536 600 aaPredicted RBP8.08□□□□□ -1.12
USP48-202ENST00000374730 CTBSQ01459 385 aa8.08□□□□□ -1.12
USP48-202ENST00000374730 PTK7Q13308 1070 aa8.08□□□□□ -1.12
USP48-202ENST00000374730 C1orf53Q5VUE5 145 aa8.08□□□□□ -1.12
USP48-202ENST00000374730 STAG2Q8N3U4 1231 aa8.08□□□□□ -1.12
USP48-202ENST00000374730 NEDD1Q8NHV4 660 aa8.08□□□□□ -1.12
USP48-202ENST00000374730 GAS2L2Q8NHY3 880 aa8.08□□□□□ -1.12
USP48-202ENST00000374730 DCDC2BA2VCK2 349 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 USP17L15C9J2P7 530 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 USP17L10C9JJH3 530 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 USP17L13C9JLJ4 530 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 USP17L12C9JPN9 530 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 USP17L11C9JVI0 530 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 USP17L21D6R901 530 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 USP17L18D6R9N7 530 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 USP17L22D6RA61 530 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 USP17L17D6RBQ6 530 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 USP17L19D6RCP7 530 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 USP17L20D6RJB6 530 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 EFSO43281 561 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms