RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 ERCC3P19447 782 aa10.67□□□□□ -0.7
PTPRT-205ENST00000373193 IL1RAPL2Q9NP60 686 aa10.67□□□□□ -0.7
PTPRT-205ENST00000373193 PPFIA3O75145 1194 aa10.67□□□□□ -0.7
PTPRT-205ENST00000373193 OTUD6BQ8N6M0 293 aa10.67□□□□□ -0.7
PTPRT-205ENST00000373193 SLC4A2P04920 1241 aa10.67□□□□□ -0.7
PTPRT-205ENST00000373193 CCDC85AQ96PX6 553 aaPredicted RBP10.67□□□□□ -0.7
PTPRT-205ENST00000373193 PHACTR2O75167 634 aa10.67□□□□□ -0.7
PTPRT-205ENST00000373193 TWISTNBQ3B726 338 aaPredicted RBP10.67□□□□□ -0.7
PTPRT-205ENST00000373193 FEZ2Q9UHY8 353 aaPredicted RBP10.67□□□□□ -0.7
PTPRT-205ENST00000373193 PRDM2Q13029 1718 aa10.67□□□□□ -0.7
PTPRT-205ENST00000373193 MYL6BP14649 208 aa10.66□□□□□ -0.7
PTPRT-205ENST00000373193 CAPZA3Q96KX2 299 aa10.66□□□□□ -0.7
PTPRT-205ENST00000373193 PANK2Q9BZ23 570 aa10.66□□□□□ -0.7
PTPRT-205ENST00000373193 MMRN2Q9H8L6 949 aa10.66□□□□□ -0.7
PTPRT-205ENST00000373193 TCP11L2Q8N4U5 519 aa10.66□□□□□ -0.7
PTPRT-205ENST00000373193 CCDC155Q8N6L0 562 aa10.66□□□□□ -0.7
PTPRT-205ENST00000373193 CCDC114Q96M63 670 aa10.66□□□□□ -0.7
PTPRT-205ENST00000373193 FAM114A1Q8IWE2 563 aa10.66□□□□□ -0.7
PTPRT-205ENST00000373193 RAPGEF4Q8WZA2 1011 aa10.66□□□□□ -0.7
PTPRT-205ENST00000373193 RBM42Q9BTD8 480 aaKnown RBP10.66□□□□□ -0.7
PTPRT-205ENST00000373193 ANAPC4Q9UJX5 808 aa10.66□□□□□ -0.7
PTPRT-205ENST00000373193 PRPF40BQ6NWY9 871 aaKnown RBP10.66□□□□□ -0.7
PTPRT-205ENST00000373193 CCDC82Q8N4S0 544 aa10.66□□□□□ -0.7
PTPRT-205ENST00000373193 RSRC1Q96IZ7 334 aaKnown RBP10.66□□□□□ -0.7
PTPRT-205ENST00000373193 FAM184BQ9ULE4 1060 aa10.66□□□□□ -0.7
PTPRT-205ENST00000373193 CLNS1AP54105 237 aaKnown RBP10.66□□□□□ -0.7
PTPRT-205ENST00000373193 RFC1P35251 1148 aaPredicted RBP10.66□□□□□ -0.7
PTPRT-205ENST00000373193 FERMT2Q96AC1 680 aa10.66□□□□□ -0.7
PTPRT-205ENST00000373193 CWC25Q9NXE8 425 aaPredicted RBP10.66□□□□□ -0.7
PTPRT-205ENST00000373193 RAB3IL1Q8TBN0 382 aa10.66□□□□□ -0.7
PTPRT-205ENST00000373193 PPP1R1BQ9UD71 204 aaPredicted RBP10.66□□□□□ -0.7
PTPRT-205ENST00000373193 UACAQ9BZF9 1416 aa10.66□□□□□ -0.7
PTPRT-205ENST00000373193 CEP120Q8N960 986 aa10.65□□□□□ -0.7
PTPRT-205ENST00000373193 ARFGAP3Q9NP61 516 aa10.65□□□□□ -0.7
PTPRT-205ENST00000373193 GTF3C6Q969F1 213 aa10.65□□□□□ -0.7
PTPRT-205ENST00000373193 KIF5BP33176 963 aa10.65□□□□□ -0.7
PTPRT-205ENST00000373193 DZIP1Q86YF9 867 aaKnown RBP10.65□□□□□ -0.7
PTPRT-205ENST00000373193 RGS22Q8NE09 1264 aa10.65□□□□□ -0.7
PTPRT-205ENST00000373193 TRMT1LQ7Z2T5 733 aaKnown RBP10.65□□□□□ -0.7
PTPRT-205ENST00000373193 CCDC63Q8NA47 563 aa10.65□□□□□ -0.7
PTPRT-205ENST00000373193 CCDC171Q6TFL3 1326 aa10.65□□□□□ -0.71
PTPRT-205ENST00000373193 WASF1Q92558 559 aa10.64□□□□□ -0.71
PTPRT-205ENST00000373193 TMEM110-MUSTN1A8MSY1 372 aa10.64□□□□□ -0.71
PTPRT-205ENST00000373193 DDX46Q7L014 1031 aaKnown RBP10.64□□□□□ -0.71
PTPRT-205ENST00000373193 IQCGQ9H095 443 aaKnown RBP10.64□□□□□ -0.71
PTPRT-205ENST00000373193 TRIM21P19474 475 aaKnown RBP10.64□□□□□ -0.71
PTPRT-205ENST00000373193 SEC63Q9UGP8 760 aaKnown RBP10.64□□□□□ -0.71
PTPRT-205ENST00000373193 MRPS9P82933 396 aaKnown RBP10.64□□□□□ -0.71
PTPRT-205ENST00000373193 CNNM3Q8NE01 707 aa10.64□□□□□ -0.71
PTPRT-205ENST00000373193 TCERG1LQ5VWI1 586 aa10.64□□□□□ -0.71
PTPRT-205ENST00000373193 EFCAB2Q5VUJ9 269 aa10.64□□□□□ -0.71
PTPRT-205ENST00000373193 SUDS3Q9H7L9 328 aaPredicted RBP10.64□□□□□ -0.71
PTPRT-205ENST00000373193 PRKAR2BP31323 418 aa10.64□□□□□ -0.71
PTPRT-205ENST00000373193 GSDMDP57764 484 aa10.64□□□□□ -0.71
PTPRT-205ENST00000373193 CCT2P78371 535 aaKnown RBP10.64□□□□□ -0.71
PTPRT-205ENST00000373193 RAD54L2Q9Y4B4 1467 aa10.64□□□□□ -0.71
PTPRT-205ENST00000373193 WDR78Q5VTH9 848 aa10.64□□□□□ -0.71
PTPRT-205ENST00000373193 ZSCAN29Q8IWY8 852 aaPredicted RBP10.64□□□□□ -0.71
PTPRT-205ENST00000373193 PAXBP1Q9Y5B6 917 aa10.64□□□□□ -0.71
PTPRT-205ENST00000373193 SMC6Q96SB8 1091 aa10.64□□□□□ -0.71
PTPRT-205ENST00000373193 ZFYP08048 801 aaPredicted RBP10.63□□□□□ -0.71
PTPRT-205ENST00000373193 TFIP11Q9UBB9 837 aaKnown RBP10.63□□□□□ -0.71
PTPRT-205ENST00000373193 DNAI1Q9UI46 699 aa10.63□□□□□ -0.71
PTPRT-205ENST00000373193 KRBA2Q6ZNG9 492 aa10.63□□□□□ -0.71
PTPRT-205ENST00000373193 CCDC94Q9BW85 323 aaPredicted RBP10.63□□□□□ -0.71
PTPRT-205ENST00000373193 FHOD3Q2V2M9 1422 aa10.63□□□□□ -0.71
PTPRT-205ENST00000373193 MTHFSP49914 203 aa10.63□□□□□ -0.71
PTPRT-205ENST00000373193 RABEP2Q9H5N1 569 aa10.63□□□□□ -0.71
PTPRT-205ENST00000373193 PTGS1P23219 599 aa10.63□□□□□ -0.71
PTPRT-205ENST00000373193 CCDC144CPQ8IYA2 1237 aa10.63□□□□□ -0.71
PTPRT-205ENST00000373193 CCDC150Q8NCX0 1101 aa10.63□□□□□ -0.71
PTPRT-205ENST00000373193 CCDC40Q4G0X9 1142 aa10.63□□□□□ -0.71
PTPRT-205ENST00000373193 C8orf76Q96K31 380 aa10.63□□□□□ -0.71
PTPRT-205ENST00000373193 PRC1O43663 620 aa10.63□□□□□ -0.71
PTPRT-205ENST00000373193 CKAP4Q07065 602 aaKnown RBP10.63□□□□□ -0.71
PTPRT-205ENST00000373193 EBAG9O00559 213 aa10.63□□□□□ -0.71
PTPRT-205ENST00000373193 GJC1P36383 396 aa10.63□□□□□ -0.71
PTPRT-205ENST00000373193 ZSCAN23Q3MJ62 389 aa10.62□□□□□ -0.71
PTPRT-205ENST00000373193 TMEM57Q8N5G2 664 aa10.62□□□□□ -0.71
PTPRT-205ENST00000373193 NEMFO60524 1076 aa10.62□□□□□ -0.71
PTPRT-205ENST00000373193 IDH1O75874 414 aaKnown RBP10.62□□□□□ -0.71
PTPRT-205ENST00000373193 PCK1P35558 622 aa10.62□□□□□ -0.71
PTPRT-205ENST00000373193 DIXDC1Q155Q3 683 aa10.62□□□□□ -0.71
PTPRT-205ENST00000373193 SRGAP3O43295 1099 aa10.62□□□□□ -0.71
PTPRT-205ENST00000373193 MVPQ14764 893 aaKnown RBP10.62□□□□□ -0.71
PTPRT-205ENST00000373193 RAB11FIP4Q86YS3 637 aa10.62□□□□□ -0.71
PTPRT-205ENST00000373193 BRD4O60885 1362 aaPredicted RBP10.62□□□□□ -0.71
PTPRT-205ENST00000373193 RASSF4Q9H2L5 321 aa10.62□□□□□ -0.71
PTPRT-205ENST00000373193 CCDC129Q6ZRS4 1044 aa10.62□□□□□ -0.71
PTPRT-205ENST00000373193 PRIMPOLQ96LW4 560 aa10.62□□□□□ -0.71
PTPRT-205ENST00000373193 FGFR1OPO95684 399 aaKnown RBP10.62□□□□□ -0.71
PTPRT-205ENST00000373193 PPP1R12CQ9BZL4 782 aa10.62□□□□□ -0.71
PTPRT-205ENST00000373193 KIAA0753Q2KHM9 967 aa10.62□□□□□ -0.71
PTPRT-205ENST00000373193 HDGFL1Q5TGJ6 251 aa10.62□□□□□ -0.71
PTPRT-205ENST00000373193 SREK1Q8WXA9 508 aaKnown RBP10.62□□□□□ -0.71
PTPRT-205ENST00000373193 GTPBP4Q9BZE4 634 aaKnown RBP10.62□□□□□ -0.71
PTPRT-205ENST00000373193 RHOXF2BP0C7M4 288 aa10.62□□□□□ -0.71
PTPRT-205ENST00000373193 HCLS1P14317 486 aaPredicted RBP10.62□□□□□ -0.71
PTPRT-205ENST00000373193 GIMAP6Q6P9H5 292 aa10.62□□□□□ -0.71
PTPRT-205ENST00000373193 SEC62Q99442 399 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 212.1 ms