RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 LMNB2Q03252 620 aa10.01□□□□□ -0.81
VANGL1-204ENST00000369510 FSD1Q9BTV5 496 aa10.01□□□□□ -0.81
VANGL1-204ENST00000369510 CCDC94Q9BW85 323 aaPredicted RBP10.01□□□□□ -0.81
VANGL1-204ENST00000369510 USP25Q9UHP3 1055 aa10.01□□□□□ -0.81
VANGL1-204ENST00000369510 TACC3Q9Y6A5 838 aa10.01□□□□□ -0.81
VANGL1-204ENST00000369510 CCDC65Q8IXS2 484 aa10□□□□□ -0.81
VANGL1-204ENST00000369510 RRP7AQ9Y3A4 280 aaKnown RBP10□□□□□ -0.81
VANGL1-204ENST00000369510 ERICH4A6NGS2 130 aa10□□□□□ -0.81
VANGL1-204ENST00000369510 RUFY3Q7L099 469 aa10□□□□□ -0.81
VANGL1-204ENST00000369510 ANLNQ9NQW6 1124 aa10□□□□□ -0.81
VANGL1-204ENST00000369510 GFAPP14136 432 aa10□□□□□ -0.81
VANGL1-204ENST00000369510 CTNNBL1Q8WYA6 563 aaPredicted RBP10□□□□□ -0.81
VANGL1-204ENST00000369510 CTAGE9A4FU28 777 aa10□□□□□ -0.81
VANGL1-204ENST00000369510 RRP1P56182 461 aaKnown RBP10□□□□□ -0.81
VANGL1-204ENST00000369510 C1orf141Q5JVX7 400 aa10□□□□□ -0.81
VANGL1-204ENST00000369510 TTC21AQ8NDW8 1320 aa10□□□□□ -0.81
VANGL1-204ENST00000369510 RILPL2Q969X0 211 aa10□□□□□ -0.81
VANGL1-204ENST00000369510 TSG101Q99816 390 aa10□□□□□ -0.81
VANGL1-204ENST00000369510 LRSAM1Q6UWE0 723 aa10□□□□□ -0.81
VANGL1-204ENST00000369510 SEC63Q9UGP8 760 aaKnown RBP10□□□□□ -0.81
VANGL1-204ENST00000369510 TDRD9Q8NDG6 1382 aaKnown RBP10□□□□□ -0.81
VANGL1-204ENST00000369510 CCDC69A6NI79 296 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 ERCC5P28715 1186 aaPredicted RBP9.99□□□□□ -0.81
VANGL1-204ENST00000369510 ATP5DP30049 168 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 HSP90AA5PQ58FG0 334 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 WDR78Q5VTH9 848 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 CEBPZQ03701 1054 aaKnown RBP9.99□□□□□ -0.81
VANGL1-204ENST00000369510 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.99□□□□□ -0.81
VANGL1-204ENST00000369510 KRT83P78385 493 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 MSANTD4Q8NCY6 345 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 FAN1Q9Y2M0 1017 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 IKQ13123 557 aaPredicted RBP9.99□□□□□ -0.81
VANGL1-204ENST00000369510 CCDC40Q4G0X9 1142 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 DHX37Q8IY37 1157 aaKnown RBP9.99□□□□□ -0.81
VANGL1-204ENST00000369510 UIMC1Q96RL1 719 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 TRIM7Q9C029 511 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 Q9H521 79 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 HSF2BPO75031 334 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 GAS8O95995 478 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 CCDC121Q6ZUS5 278 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 SPATS2LQ9NUQ6 558 aaKnown RBP9.99□□□□□ -0.81
VANGL1-204ENST00000369510 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.99□□□□□ -0.81
VANGL1-204ENST00000369510 ANGPTL3Q9Y5C1 460 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 LMNAP02545 664 aaKnown RBP9.99□□□□□ -0.81
VANGL1-204ENST00000369510 USP37Q86T82 979 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 WASF1Q92558 559 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 CCDC68Q9H2F9 335 aa9.99□□□□□ -0.81
VANGL1-204ENST00000369510 UQCRHLA0A096LP55 91 aa9.98□□□□□ -0.81
VANGL1-204ENST00000369510 UQCRHP07919 91 aa9.98□□□□□ -0.81
VANGL1-204ENST00000369510 FOXD4L6Q3SYB3 417 aaPredicted RBP9.98□□□□□ -0.81
VANGL1-204ENST00000369510 FOXD4L3Q6VB84 417 aaPredicted RBP9.98□□□□□ -0.81
VANGL1-204ENST00000369510 SPAG5Q96R06 1193 aa9.98□□□□□ -0.81
VANGL1-204ENST00000369510 PYM1Q9BRP8 204 aaKnown RBP9.98□□□□□ -0.81
VANGL1-204ENST00000369510 GOPCQ9HD26 462 aa9.98□□□□□ -0.81
VANGL1-204ENST00000369510 DDX27Q96GQ7 796 aaKnown RBP9.98□□□□□ -0.81
VANGL1-204ENST00000369510 RUSC2Q8N2Y8 1516 aa9.98□□□□□ -0.81
VANGL1-204ENST00000369510 USP6NLQ92738 828 aa9.98□□□□□ -0.81
VANGL1-204ENST00000369510 SERPINI2O75830 405 aa9.98□□□□□ -0.81
VANGL1-204ENST00000369510 ARFGAP2Q8N6H7 521 aa9.98□□□□□ -0.81
VANGL1-204ENST00000369510 ZC3H15Q8WU90 426 aaKnown RBP9.98□□□□□ -0.81
VANGL1-204ENST00000369510 ATP6V0A1Q93050 837 aa9.98□□□□□ -0.81
VANGL1-204ENST00000369510 TRIM55Q9BYV6 548 aa9.98□□□□□ -0.81
VANGL1-204ENST00000369510 EIF5P55010 431 aaKnown RBP9.98□□□□□ -0.81
VANGL1-204ENST00000369510 JAKMIP1Q96N16 626 aaKnown RBP9.98□□□□□ -0.81
VANGL1-204ENST00000369510 BRPF3Q9ULD4 1205 aa9.98□□□□□ -0.81
VANGL1-204ENST00000369510 TBC1D2BQ9UPU7 963 aa9.98□□□□□ -0.81
VANGL1-204ENST00000369510 TTC31Q49AM3 519 aaPredicted RBP9.98□□□□□ -0.81
VANGL1-204ENST00000369510 SDCCAG8Q86SQ7 713 aaPredicted RBP9.98□□□□□ -0.81
VANGL1-204ENST00000369510 POTEDQ86YR6 584 aa9.97□□□□□ -0.81
VANGL1-204ENST00000369510 GFM2Q969S9 779 aaKnown RBP9.97□□□□□ -0.81
VANGL1-204ENST00000369510 CTAGE1Q96RT6 745 aa9.97□□□□□ -0.81
VANGL1-204ENST00000369510 BLVRAP53004 296 aa9.97□□□□□ -0.81
VANGL1-204ENST00000369510 RAPGEF2Q9Y4G8 1499 aa9.97□□□□□ -0.81
VANGL1-204ENST00000369510 CCDC124Q96CT7 223 aaKnown RBP9.97□□□□□ -0.81
VANGL1-204ENST00000369510 PHAXQ9H814 394 aaKnown RBP9.97□□□□□ -0.81
VANGL1-204ENST00000369510 CAVIN2O95810 425 aa9.97□□□□□ -0.81
VANGL1-204ENST00000369510 SP100P23497 879 aaPredicted RBP9.97□□□□□ -0.81
VANGL1-204ENST00000369510 B4GALNT4Q76KP1 1039 aa9.97□□□□□ -0.81
VANGL1-204ENST00000369510 TOP2AP11388 1531 aaKnown RBP9.97□□□□□ -0.81
VANGL1-204ENST00000369510 RAB34Q9BZG1 259 aa9.97□□□□□ -0.81
VANGL1-204ENST00000369510 MSH5O43196 834 aa9.96□□□□□ -0.81
VANGL1-204ENST00000369510 PDXDC1Q6P996 788 aa9.96□□□□□ -0.81
VANGL1-204ENST00000369510 SPATA32Q96LK8 384 aa9.96□□□□□ -0.81
VANGL1-204ENST00000369510 ESPNB1AK53 854 aa9.96□□□□□ -0.81
VANGL1-204ENST00000369510 STXBP4Q6ZWJ1 553 aa9.96□□□□□ -0.81
VANGL1-204ENST00000369510 CACNA2D4Q7Z3S7 1137 aa9.96□□□□□ -0.81
VANGL1-204ENST00000369510 ANKRD24Q8TF21 1146 aa9.96□□□□□ -0.81
VANGL1-204ENST00000369510 MATR3P43243 847 aaKnown RBP eCLIP9.96□□□□□ -0.81
VANGL1-204ENST00000369510 HNRNPMP52272 730 aaKnown RBP eCLIP9.96□□□□□ -0.81
VANGL1-204ENST00000369510 APBB1IPQ7Z5R6 666 aaPredicted RBP9.96□□□□□ -0.81
VANGL1-204ENST00000369510 FBXW7Q969H0 707 aa9.96□□□□□ -0.81
VANGL1-204ENST00000369510 DACT3Q96B18 629 aaPredicted RBP9.96□□□□□ -0.81
VANGL1-204ENST00000369510 NLRP5P59047 1200 aa9.96□□□□□ -0.81
VANGL1-204ENST00000369510 CROCCP2Q86T23 111 aa9.96□□□□□ -0.81
VANGL1-204ENST00000369510 LTV1Q96GA3 475 aaPredicted RBP9.96□□□□□ -0.81
VANGL1-204ENST00000369510 DRC3Q9H069 523 aa9.96□□□□□ -0.81
VANGL1-204ENST00000369510 BRPF1P55201 1214 aaPredicted RBP9.96□□□□□ -0.82
VANGL1-204ENST00000369510 STK38Q15208 465 aa9.96□□□□□ -0.82
VANGL1-204ENST00000369510 SLC4A10Q6U841 1118 aa9.96□□□□□ -0.82
VANGL1-204ENST00000369510 SRGAP1Q7Z6B7 1085 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms