RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 TNFRSF10AO00220 468 aa5.08□□□□□ -1.6
ECHDC1-205ENST00000368295 LILRB3O75022 631 aa5.08□□□□□ -1.6
ECHDC1-205ENST00000368295 GPR162Q16538 588 aa5.08□□□□□ -1.6
ECHDC1-205ENST00000368295 TMCO4Q5TGY1 634 aa5.08□□□□□ -1.6
ECHDC1-205ENST00000368295 PPP2R2DQ66LE6 453 aa5.08□□□□□ -1.6
ECHDC1-205ENST00000368295 BCCIPQ9P287 314 aaKnown RBP eCLIP5.08□□□□□ -1.6
ECHDC1-205ENST00000368295 PCDHGC3Q9UN70 934 aa5.08□□□□□ -1.6
ECHDC1-205ENST00000368295 MTMR7Q9Y216 660 aa5.08□□□□□ -1.6
ECHDC1-205ENST00000368295 PCDHB15Q9Y5E8 787 aa5.08□□□□□ -1.6
ECHDC1-205ENST00000368295 PLXNC1O60486 1568 aa5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 E9PSI1 815 aa5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 C6orf229H3BNL8 230 aa5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 FMNL1O95466 1100 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 RBM25P49756 843 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 MTMR2Q13614 643 aa5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 CABLES1Q8TDN4 633 aa5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 DACH1Q9UI36 760 aa5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 SLC27A5Q9Y2P5 690 aa5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 CTTNBP2Q8WZ74 1663 aa5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 ATF3P18847 181 aa5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 COPS2P61201 443 aa5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 FAM9AQ8IZU1 332 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 EMID1Q96A84 441 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 BCL11AQ9H165 835 aa5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 SENP2Q9HC62 589 aa5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 SALL2Q9Y467 1007 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-205ENST00000368295 SAMD9LQ8IVG5 1584 aa5.06□□□□□ -1.6
ECHDC1-205ENST00000368295 SPAG9O60271 1321 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-205ENST00000368295 ABCC3O15438 1527 aa5.06□□□□□ -1.6
ECHDC1-205ENST00000368295 NKTRP30414 1462 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-205ENST00000368295 RNF223E7ERA6 249 aa5.06□□□□□ -1.6
ECHDC1-205ENST00000368295 RFC5P40937 340 aa5.06□□□□□ -1.6
ECHDC1-205ENST00000368295 QPCTQ16769 361 aa5.06□□□□□ -1.6
ECHDC1-205ENST00000368295 TMEM259Q4ZIN3 620 aa5.06□□□□□ -1.6
ECHDC1-205ENST00000368295 RETREG3Q86VR2 466 aa5.06□□□□□ -1.6
ECHDC1-205ENST00000368295 JMYQ8N9B5 988 aa5.06□□□□□ -1.6
ECHDC1-205ENST00000368295 ANKLE1Q8NAG6 615 aa5.06□□□□□ -1.6
ECHDC1-205ENST00000368295 KLRG1Q96E93 195 aa5.06□□□□□ -1.6
ECHDC1-205ENST00000368295 HSPA1AP0DMV8 641 aaKnown RBP5.05□□□□□ -1.6
ECHDC1-205ENST00000368295 HSPA1BP0DMV9 641 aaKnown RBP5.05□□□□□ -1.6
ECHDC1-205ENST00000368295 HNRNPMP52272 730 aaKnown RBP eCLIP5.05□□□□□ -1.63e-8■■■■■ 29
ECHDC1-205ENST00000368295 TRIM37O94972 964 aa5.05□□□□□ -1.6
ECHDC1-205ENST00000368295 FLIIQ13045 1269 aa5.05□□□□□ -1.6
ECHDC1-205ENST00000368295 RTL5Q5HYW3 569 aaPredicted RBP5.05□□□□□ -1.6
ECHDC1-205ENST00000368295 BRICD5Q6PL45 260 aa5.05□□□□□ -1.6
ECHDC1-205ENST00000368295 SCUBE3Q8IX30 993 aa5.05□□□□□ -1.6
ECHDC1-205ENST00000368295 TMEM151AQ8N4L1 468 aa5.05□□□□□ -1.6
ECHDC1-205ENST00000368295 BANK1Q8NDB2 785 aa5.05□□□□□ -1.6
ECHDC1-205ENST00000368295 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.05□□□□□ -1.6
ECHDC1-205ENST00000368295 FMN1Q68DA7 1419 aa5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 ZPR1O75312 459 aa5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 ADH1BP00325 375 aa5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 MFAP1P55081 439 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 MSS51Q4VC12 460 aa5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 RNF19BQ6ZMZ0 732 aa5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 HELBQ8NG08 1087 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 PRR7Q8TB68 274 aa5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 THAP11Q96EK4 314 aa5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 USB1Q9BQ65 265 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 ZNF777Q9ULD5 760 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 EID1Q9Y6B2 187 aa5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 UBR1Q8IWV7 1749 aa5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 WASHC2CQ9Y4E1 1318 aa5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 DISP2A7MBM2 1401 aa5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 APBA3O96018 575 aa5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 GMPRP36959 345 aa5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 MLLT1Q03111 559 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 UNC5CLQ8IV45 518 aa5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 IRF7Q92985 503 aa5.04□□□□□ -1.6
ECHDC1-205ENST00000368295 SPHKAPQ2M3C7 1700 aa5.03□□□□□ -1.6
ECHDC1-205ENST00000368295 TNS1Q9HBL0 1735 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-205ENST00000368295 PTCH1Q13635 1447 aa5.03□□□□□ -1.6
ECHDC1-205ENST00000368295 AP1G2O75843 785 aa5.03□□□□□ -1.6
ECHDC1-205ENST00000368295 NPAS3Q8IXF0 933 aa5.03□□□□□ -1.6
ECHDC1-205ENST00000368295 MPNDQ8N594 471 aa5.03□□□□□ -1.6
ECHDC1-205ENST00000368295 SYMPKQ92797 1274 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-205ENST00000368295 KIFC2Q96AC6 838 aa5.03□□□□□ -1.6
ECHDC1-205ENST00000368295 TRIM47Q96LD4 638 aa5.03□□□□□ -1.6
ECHDC1-205ENST00000368295 SPSB2Q99619 263 aa5.03□□□□□ -1.6
ECHDC1-205ENST00000368295 USP35Q9P2H5 1018 aa5.03□□□□□ -1.6
ECHDC1-205ENST00000368295 ARHGAP35Q9NRY4 1499 aa5.03□□□□□ -1.6
ECHDC1-205ENST00000368295 SLIT1O75093 1534 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 NUP188Q5SRE5 1749 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 CFAP99D6REC4 459 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 KIF3BO15066 747 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 TLL1O43897 1013 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 JUNDP17535 347 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 NBPF8Q3BBV2 869 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 NBPF14Q5TI25 921 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 LIAT1Q6ZQX7 453 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 TSC1Q92574 1164 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 C19orf44Q9H6X5 657 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 DLC1Q96QB1 1528 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 TET3O43151 1660 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 SAMD9Q5K651 1589 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 IGHA1P01876 353 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 USP17L8P0C7I0 530 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 DESI1Q6ICB0 168 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 AEBP1Q8IUX7 1158 aa5.02□□□□□ -1.61
ECHDC1-205ENST00000368295 RGPD1P0DJD0 1748 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms