RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 CCDC113Q9H0I3 377 aa18.22■□□□□ 0.51
NUCKS1-201ENST00000367142 GOLGA6L10A0A0M3HER8 536 aa18.21■□□□□ 0.51
NUCKS1-201ENST00000367142 C8orf76Q96K31 380 aa18.21■□□□□ 0.51
NUCKS1-201ENST00000367142 CIZ1Q9ULV3 898 aaPredicted RBP18.21■□□□□ 0.51
NUCKS1-201ENST00000367142 GOLGA8AA7E2F4 631 aa18.21■□□□□ 0.51
NUCKS1-201ENST00000367142 GOLGA8BA8MQT2 603 aa18.21■□□□□ 0.51
NUCKS1-201ENST00000367142 EHBP1L1Q8N3D4 1523 aa18.21■□□□□ 0.51
NUCKS1-201ENST00000367142 GCOM1H8Y6P7 765 aaPredicted RBP18.21■□□□□ 0.51
NUCKS1-201ENST00000367142 MYZAPP0CAP1 466 aa18.21■□□□□ 0.51
NUCKS1-201ENST00000367142 FERMT1Q9BQL6 677 aa18.21■□□□□ 0.51
NUCKS1-201ENST00000367142 TEX13AQ9BXU3 409 aaPredicted RBP18.21■□□□□ 0.51
NUCKS1-201ENST00000367142 CDC5LQ99459 802 aaKnown RBP18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 CRACR2AQ9BSW2 395 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 DDX46Q7L014 1031 aaKnown RBP18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 LUZP1Q86V48 1076 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 BOLA2Q9H3K6 86 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 HOMER2Q9NSB8 354 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 USP8P40818 1118 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 CALML4Q96GE6 196 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 EXOC6BQ9Y2D4 811 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 ERICH3Q5RHP9 1530 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 NSD3Q9BZ95 1437 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 BAG3O95817 575 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 ST5P78524 1137 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 TTF1Q15361 905 aaPredicted RBP18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 SPTY2D1Q68D10 685 aaPredicted RBP18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 NF2P35240 595 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 KLHL10Q6JEL2 608 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 CCDC83Q8IWF9 413 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 ANO10Q9NW15 660 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 MIS18AQ9NYP9 233 aa18.2■□□□□ 0.5
NUCKS1-201ENST00000367142 AMPD3Q01432 767 aa18.19■□□□□ 0.5
NUCKS1-201ENST00000367142 HYPKQ9NX55 129 aa18.19■□□□□ 0.5
NUCKS1-201ENST00000367142 KIF5CO60282 957 aa18.19■□□□□ 0.5
NUCKS1-201ENST00000367142 USO1O60763 962 aaKnown RBP18.19■□□□□ 0.5
NUCKS1-201ENST00000367142 MCM3P25205 808 aa18.19■□□□□ 0.5
NUCKS1-201ENST00000367142 KIF5BP33176 963 aa18.19■□□□□ 0.5
NUCKS1-201ENST00000367142 MCM10Q7L590 875 aa18.19■□□□□ 0.5
NUCKS1-201ENST00000367142 MACROD2A1Z1Q3 448 aa18.19■□□□□ 0.5
NUCKS1-201ENST00000367142 IFIT3O14879 490 aaKnown RBP18.19■□□□□ 0.5
NUCKS1-201ENST00000367142 GOPCQ9HD26 462 aa18.18■□□□□ 0.5
NUCKS1-201ENST00000367142 SH2B1Q9NRF2 756 aaPredicted RBP18.18■□□□□ 0.5
NUCKS1-201ENST00000367142 KIF2AO00139 706 aaPredicted RBP18.18■□□□□ 0.5
NUCKS1-201ENST00000367142 MAP9Q49MG5 647 aa18.18■□□□□ 0.5
NUCKS1-201ENST00000367142 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.18■□□□□ 0.5
NUCKS1-201ENST00000367142 DMRT2Q9Y5R5 561 aa18.18■□□□□ 0.5
NUCKS1-201ENST00000367142 IFT140Q96RY7 1462 aa18.18■□□□□ 0.5
NUCKS1-201ENST00000367142 TMPOP42166 694 aaKnown RBP18.18■□□□□ 0.5
NUCKS1-201ENST00000367142 IFFO1Q0D2I5 559 aa18.18■□□□□ 0.5
NUCKS1-201ENST00000367142 ZNF622Q969S3 477 aaKnown RBP eCLIP18.18■□□□□ 0.54e-12■■■□□ 17.7
NUCKS1-201ENST00000367142 CA8P35219 290 aa18.18■□□□□ 0.5
NUCKS1-201ENST00000367142 PDE4BQ07343 736 aa18.18■□□□□ 0.5
NUCKS1-201ENST00000367142 MRC2Q9UBG0 1479 aa18.18■□□□□ 0.5
NUCKS1-201ENST00000367142 CAMK4Q16566 473 aa18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 PPP1R42Q7Z4L9 355 aa18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 SFPQP23246 707 aaKnown RBP eCLIP18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 GSTO1P78417 241 aa18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 TAOK3Q9H2K8 898 aa18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 CFTRP13569 1480 aa18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 CASQ1P31415 396 aa18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 TDRD12Q587J7 1177 aaKnown RBP18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 GIGYF2Q6Y7W6 1299 aaKnown RBP18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 GRPEL1Q9HAV7 217 aa18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 PHF8Q9UPP1 1060 aa18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 YEATS4O95619 227 aa18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 DHX37Q8IY37 1157 aaKnown RBP18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 UBXN4Q92575 508 aa18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 KAT14Q9H8E8 782 aa18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 SSX2IPQ9Y2D8 614 aa18.17■□□□□ 0.5
NUCKS1-201ENST00000367142 SCAND2PQ9GZW5 306 aaPredicted RBP18.16■□□□□ 0.5
NUCKS1-201ENST00000367142 SMC1AQ14683 1233 aaKnown RBP18.16■□□□□ 0.5
NUCKS1-201ENST00000367142 MPNDQ8N594 471 aa18.16■□□□□ 0.5
NUCKS1-201ENST00000367142 SAMM50Q9Y512 469 aa18.16■□□□□ 0.5
NUCKS1-201ENST00000367142 EPRSP07814 1512 aaKnown RBP18.16■□□□□ 0.5
NUCKS1-201ENST00000367142 TMEM57Q8N5G2 664 aa18.16■□□□□ 0.5
NUCKS1-201ENST00000367142 USHBP1Q8N6Y0 703 aa18.16■□□□□ 0.5
NUCKS1-201ENST00000367142 TCP11L1Q9NUJ3 509 aa18.16■□□□□ 0.5
NUCKS1-201ENST00000367142 RFC4P35249 363 aa18.16■□□□□ 0.5
NUCKS1-201ENST00000367142 LRRC27Q9C0I9 530 aa18.16■□□□□ 0.5
NUCKS1-201ENST00000367142 PPM1EQ8WY54 764 aa18.16■□□□□ 0.5
NUCKS1-201ENST00000367142 NUP88Q99567 741 aaPredicted RBP18.16■□□□□ 0.5
NUCKS1-201ENST00000367142 SYCP3Q8IZU3 236 aa18.15■□□□□ 0.5
NUCKS1-201ENST00000367142 TSNARE1Q96NA8 513 aa18.15■□□□□ 0.5
NUCKS1-201ENST00000367142 PYM1Q9BRP8 204 aaKnown RBP18.15■□□□□ 0.5
NUCKS1-201ENST00000367142 SHTN1A0MZ66 631 aa18.15■□□□□ 0.5
NUCKS1-201ENST00000367142 TOP1P11387 765 aaKnown RBP18.15■□□□□ 0.5
NUCKS1-201ENST00000367142 CCDC40Q4G0X9 1142 aa18.15■□□□□ 0.5
NUCKS1-201ENST00000367142 DNAAF4Q8WXU2 420 aa18.15■□□□□ 0.5
NUCKS1-201ENST00000367142 PLEKHH1Q9ULM0 1364 aa18.15■□□□□ 0.5
NUCKS1-201ENST00000367142 LRRC45Q96CN5 670 aa18.15■□□□□ 0.5
NUCKS1-201ENST00000367142 FAM114A1Q8IWE2 563 aa18.14■□□□□ 0.5
NUCKS1-201ENST00000367142 PAFAH1B1P43034 410 aa18.14■□□□□ 0.49
NUCKS1-201ENST00000367142 BICD1Q96G01 975 aa18.14■□□□□ 0.49
NUCKS1-201ENST00000367142 FERMT3Q86UX7 667 aa18.14■□□□□ 0.49
NUCKS1-201ENST00000367142 CCDC82Q8N4S0 544 aa18.14■□□□□ 0.49
NUCKS1-201ENST00000367142 HECW1Q76N89 1606 aa18.14■□□□□ 0.49
NUCKS1-201ENST00000367142 MTIF2P46199 727 aaKnown RBP18.14■□□□□ 0.49
NUCKS1-201ENST00000367142 CNNM3Q8NE01 707 aa18.14■□□□□ 0.49
NUCKS1-201ENST00000367142 ALS2CR12Q96Q35 445 aa18.14■□□□□ 0.49
NUCKS1-201ENST00000367142 HDAC9Q9UKV0 1011 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms