RNA–Protein interactions for RNA: ENST00000366977.7

NSL1-202, Transcript of NSL1, MIS12 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSL1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSL1-202ENST00000366977 TMX3Q96JJ7 454 aa13.48□□□□□ -0.25
NSL1-202ENST00000366977 CHD2O14647 1828 aaKnown RBP13.48□□□□□ -0.25
NSL1-202ENST00000366977 ADCY9O60503 1353 aa13.48□□□□□ -0.25
NSL1-202ENST00000366977 SRGAP3O43295 1099 aa13.47□□□□□ -0.25
NSL1-202ENST00000366977 PRPF40AO75400 957 aaKnown RBP13.47□□□□□ -0.25
NSL1-202ENST00000366977 BEND3Q5T5X7 828 aa13.47□□□□□ -0.25
NSL1-202ENST00000366977 CAVIN1Q6NZI2 390 aaKnown RBP13.47□□□□□ -0.25
NSL1-202ENST00000366977 GPT2Q8TD30 523 aa13.47□□□□□ -0.25
NSL1-202ENST00000366977 SSH3Q8TE77 659 aa13.47□□□□□ -0.25
NSL1-202ENST00000366977 DDX17Q92841 729 aaKnown RBP13.47□□□□□ -0.25
NSL1-202ENST00000366977 PA2G4Q9UQ80 394 aaKnown RBP13.47□□□□□ -0.25
NSL1-202ENST00000366977 USP54Q70EL1 1684 aa13.47□□□□□ -0.25
NSL1-202ENST00000366977 BTBD11A6QL63 1104 aa13.47□□□□□ -0.25
NSL1-202ENST00000366977 SRCIN1Q9C0H9 1055 aa13.47□□□□□ -0.25
NSL1-202ENST00000366977 N4BP2Q86UW6 1770 aaPredicted RBP13.46□□□□□ -0.25
NSL1-202ENST00000366977 ST18O60284 1047 aa13.46□□□□□ -0.25
NSL1-202ENST00000366977 CPA1P15085 419 aa13.46□□□□□ -0.25
NSL1-202ENST00000366977 CWF19L2Q2TBE0 894 aaKnown RBP13.46□□□□□ -0.25
NSL1-202ENST00000366977 PI4K2BQ8TCG2 481 aa13.46□□□□□ -0.25
NSL1-202ENST00000366977 RHPN1Q8TCX5 695 aa13.46□□□□□ -0.25
NSL1-202ENST00000366977 KDM3BQ7LBC6 1761 aa13.46□□□□□ -0.25
NSL1-202ENST00000366977 POLA2Q14181 598 aa13.46□□□□□ -0.26
NSL1-202ENST00000366977 STAP2Q9UGK3 403 aa13.46□□□□□ -0.26
NSL1-202ENST00000366977 CACNA1FO60840 1977 aa13.45□□□□□ -0.26
NSL1-202ENST00000366977 CLEC17AQ6ZS10 378 aa13.45□□□□□ -0.26
NSL1-202ENST00000366977 DDX54Q8TDD1 881 aaKnown RBP13.45□□□□□ -0.26
NSL1-202ENST00000366977 DNAAF4Q8WXU2 420 aa13.45□□□□□ -0.26
NSL1-202ENST00000366977 MED1Q15648 1581 aaPredicted RBP13.45□□□□□ -0.26
NSL1-202ENST00000366977 PIP4K2AP48426 406 aaPredicted RBP13.45□□□□□ -0.26
NSL1-202ENST00000366977 COL9A3Q14050 684 aaPredicted RBP13.45□□□□□ -0.26
NSL1-202ENST00000366977 GLIPR1L2Q4G1C9 344 aa13.45□□□□□ -0.26
NSL1-202ENST00000366977 TPRNQ4KMQ1 711 aa13.45□□□□□ -0.26
NSL1-202ENST00000366977 RGPD5Q99666 1765 aa13.44□□□□□ -0.26
NSL1-202ENST00000366977 GCP02774 474 aa13.44□□□□□ -0.26
NSL1-202ENST00000366977 RNMTO43148 476 aaKnown RBP13.44□□□□□ -0.26
NSL1-202ENST00000366977 TEFQ10587 303 aa13.44□□□□□ -0.26
NSL1-202ENST00000366977 SLC39A6Q13433 755 aa13.44□□□□□ -0.26
NSL1-202ENST00000366977 KLHL40Q2TBA0 621 aa13.44□□□□□ -0.26
NSL1-202ENST00000366977 RASEFQ8IZ41 740 aa13.44□□□□□ -0.26
NSL1-202ENST00000366977 JARID2Q92833 1246 aaPredicted RBP13.44□□□□□ -0.26
NSL1-202ENST00000366977 GDPD2Q9HCC8 539 aa13.44□□□□□ -0.26
NSL1-202ENST00000366977 MAP3K2Q9Y2U5 619 aa13.44□□□□□ -0.26
NSL1-202ENST00000366977 ZC3H6P61129 1189 aaKnown RBP13.43□□□□□ -0.26
NSL1-202ENST00000366977 AIMP1Q12904 312 aaKnown RBP13.43□□□□□ -0.26
NSL1-202ENST00000366977 ANKRD24Q8TF21 1146 aa13.43□□□□□ -0.26
NSL1-202ENST00000366977 SPG7Q9UQ90 795 aa13.43□□□□□ -0.26
NSL1-202ENST00000366977 NUCB2P80303 420 aa13.42□□□□□ -0.26
NSL1-202ENST00000366977 SKOR2Q2VWA4 1001 aaPredicted RBP13.42□□□□□ -0.26
NSL1-202ENST00000366977 ZSCAN23Q3MJ62 389 aa13.42□□□□□ -0.26
NSL1-202ENST00000366977 ADAMTSL3P82987 1691 aa13.42□□□□□ -0.26
NSL1-202ENST00000366977 PXDNLA1KZ92 1463 aa13.42□□□□□ -0.26
NSL1-202ENST00000366977 RBSNQ9H1K0 784 aa13.42□□□□□ -0.26
NSL1-202ENST00000366977 AKAP4Q5JQC9 854 aa13.41□□□□□ -0.26
NSL1-202ENST00000366977 CWC27Q6UX04 472 aaKnown RBP13.41□□□□□ -0.26
NSL1-202ENST00000366977 ARHGEF25Q86VW2 580 aa13.41□□□□□ -0.26
NSL1-202ENST00000366977 KLHDC4Q8TBB5 520 aa13.41□□□□□ -0.26
NSL1-202ENST00000366977 TMEM63CQ9P1W3 806 aa13.41□□□□□ -0.26
NSL1-202ENST00000366977 LMO7Q8WWI1 1683 aa13.41□□□□□ -0.26
NSL1-202ENST00000366977 PRIM1P49642 420 aaKnown RBP13.41□□□□□ -0.26
NSL1-202ENST00000366977 GOLGA6L22H0YM25 854 aa13.4□□□□□ -0.26
NSL1-202ENST00000366977 GIGYF1O75420 1035 aaPredicted RBP13.4□□□□□ -0.26
NSL1-202ENST00000366977 KAZALD1Q96I82 304 aa13.4□□□□□ -0.26
NSL1-202ENST00000366977 ADGRL3Q9HAR2 1447 aa13.4□□□□□ -0.26
NSL1-202ENST00000366977 ZNF142P52746 1687 aaPredicted RBP13.4□□□□□ -0.26
NSL1-202ENST00000366977 LARGE1O95461 756 aa13.4□□□□□ -0.26
NSL1-202ENST00000366977 PTH1RQ03431 593 aa13.4□□□□□ -0.26
NSL1-202ENST00000366977 PLEKHO1Q53GL0 409 aaPredicted RBP13.39□□□□□ -0.27
NSL1-202ENST00000366977 SUCLG2Q96I99 432 aa13.39□□□□□ -0.27
NSL1-202ENST00000366977 PKNOX2Q96KN3 472 aa13.39□□□□□ -0.27
NSL1-202ENST00000366977 LSG1Q9H089 658 aaKnown RBP13.39□□□□□ -0.27
NSL1-202ENST00000366977 CWC22Q9HCG8 908 aaKnown RBP13.39□□□□□ -0.27
NSL1-202ENST00000366977 BABAM1Q9NWV8 329 aa13.39□□□□□ -0.27
NSL1-202ENST00000366977 TLR7Q9NYK1 1049 aaKnown RBP13.39□□□□□ -0.27
NSL1-202ENST00000366977 SNX14Q9Y5W7 946 aa13.39□□□□□ -0.27
NSL1-202ENST00000366977 TCHHQ07283 1943 aa13.39□□□□□ -0.27
NSL1-202ENST00000366977 GADD45BO75293 160 aaPredicted RBP13.39□□□□□ -0.27
NSL1-202ENST00000366977 HSPA4P34932 840 aa13.39□□□□□ -0.27
NSL1-202ENST00000366977 NASPP49321 788 aaPredicted RBP13.39□□□□□ -0.27
NSL1-202ENST00000366977 OS9Q13438 667 aaPredicted RBP13.39□□□□□ -0.27
NSL1-202ENST00000366977 CUL4AQ13619 759 aa13.39□□□□□ -0.27
NSL1-202ENST00000366977 CABLES1Q8TDN4 633 aa13.39□□□□□ -0.27
NSL1-202ENST00000366977 SGSM2O43147 1006 aa13.38□□□□□ -0.27
NSL1-202ENST00000366977 BRD1O95696 1058 aa13.38□□□□□ -0.27
NSL1-202ENST00000366977 KIF1BPQ96EK5 621 aa13.38□□□□□ -0.27
NSL1-202ENST00000366977 NPHP4O75161 1426 aaPredicted RBP13.38□□□□□ -0.27
NSL1-202ENST00000366977 SYCE3A1L190 88 aa13.38□□□□□ -0.27
NSL1-202ENST00000366977 MYL6BP14649 208 aa13.38□□□□□ -0.27
NSL1-202ENST00000366977 ADCK5Q3MIX3 580 aa13.38□□□□□ -0.27
NSL1-202ENST00000366977 C1orf141Q5JVX7 400 aa13.38□□□□□ -0.27
NSL1-202ENST00000366977 SIL1Q9H173 461 aa13.38□□□□□ -0.27
NSL1-202ENST00000366977 CHGBP05060 677 aa13.37□□□□□ -0.27
NSL1-202ENST00000366977 PDIA6Q15084 440 aa13.37□□□□□ -0.27
NSL1-202ENST00000366977 KCNH5Q8NCM2 988 aa13.37□□□□□ -0.27
NSL1-202ENST00000366977 CCDC8Q9H0W5 538 aaPredicted RBP13.37□□□□□ -0.27
NSL1-202ENST00000366977 C9orf78Q9NZ63 289 aaPredicted RBP13.37□□□□□ -0.27
NSL1-202ENST00000366977 ESPNB1AK53 854 aa13.36□□□□□ -0.27
NSL1-202ENST00000366977 RAB11FIP3O75154 756 aa13.36□□□□□ -0.27
NSL1-202ENST00000366977 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
NSL1-202ENST00000366977 SASH1O94885 1247 aa13.36□□□□□ -0.27
NSL1-202ENST00000366977 MCCP23508 829 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms