RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TIMP2P16035 220 aa6.34□□□□□ -1.39
RNU6-28P-201ENST00000362378 WDR4P57081 412 aaKnown RBP6.34□□□□□ -1.39
RNU6-28P-201ENST00000362378 CENPCQ03188 943 aa6.34□□□□□ -1.39
RNU6-28P-201ENST00000362378 NPAS4Q8IUM7 802 aa6.34□□□□□ -1.39
RNU6-28P-201ENST00000362378 CYP4X1Q8N118 509 aa6.34□□□□□ -1.39
RNU6-28P-201ENST00000362378 MYO19Q96H55 970 aa6.34□□□□□ -1.39
RNU6-28P-201ENST00000362378 ASB16Q96NS5 453 aa6.34□□□□□ -1.39
RNU6-28P-201ENST00000362378 SAP130Q9H0E3 1048 aa6.34□□□□□ -1.39
RNU6-28P-201ENST00000362378 ZFAND3Q9H8U3 227 aa6.34□□□□□ -1.39
RNU6-28P-201ENST00000362378 EML1O00423 815 aa6.33□□□□□ -1.4
RNU6-28P-201ENST00000362378 SMPD1P17405 629 aa6.33□□□□□ -1.4
RNU6-28P-201ENST00000362378 PRR20EP86478 221 aa6.33□□□□□ -1.4
RNU6-28P-201ENST00000362378 PRR20CP86479 221 aa6.33□□□□□ -1.4
RNU6-28P-201ENST00000362378 PRR20DP86480 221 aa6.33□□□□□ -1.4
RNU6-28P-201ENST00000362378 PRR20BP86481 221 aa6.33□□□□□ -1.4
RNU6-28P-201ENST00000362378 PRR20AP86496 221 aa6.33□□□□□ -1.4
RNU6-28P-201ENST00000362378 COX20Q5RI15 118 aa6.33□□□□□ -1.4
RNU6-28P-201ENST00000362378 PPARGC1BQ86YN6 1023 aaKnown RBP6.33□□□□□ -1.4
RNU6-28P-201ENST00000362378 AGBL1Q96MI9 1066 aa6.33□□□□□ -1.4
RNU6-28P-201ENST00000362378 QTRT2Q9H974 415 aaKnown RBP6.33□□□□□ -1.4
RNU6-28P-201ENST00000362378 CHMP3Q9Y3E7 222 aa6.33□□□□□ -1.4
RNU6-28P-201ENST00000362378 SERTM1A2A2V5 107 aa6.32□□□□□ -1.4
RNU6-28P-201ENST00000362378 TNFRSF10BO14763 440 aa6.32□□□□□ -1.4
RNU6-28P-201ENST00000362378 MAPK1P28482 360 aa6.32□□□□□ -1.4
RNU6-28P-201ENST00000362378 NOS2P35228 1153 aa6.32□□□□□ -1.4
RNU6-28P-201ENST00000362378 ZDHHC1Q8WTX9 485 aa6.32□□□□□ -1.4
RNU6-28P-201ENST00000362378 NLRP3Q96P20 1036 aa6.32□□□□□ -1.4
RNU6-28P-201ENST00000362378 STIM2Q9P246 746 aa6.32□□□□□ -1.4
RNU6-28P-201ENST00000362378 UNCXA6NJT0 531 aa6.31□□□□□ -1.4
RNU6-28P-201ENST00000362378 MEN1O00255 615 aa6.31□□□□□ -1.4
RNU6-28P-201ENST00000362378 MPSTP25325 297 aa6.31□□□□□ -1.4
RNU6-28P-201ENST00000362378 GPC1P35052 558 aa6.31□□□□□ -1.4
RNU6-28P-201ENST00000362378 RELBQ01201 579 aa6.31□□□□□ -1.4
RNU6-28P-201ENST00000362378 COL19A1Q14993 1142 aa6.31□□□□□ -1.4
RNU6-28P-201ENST00000362378 ALKBH2Q6NS38 261 aa6.31□□□□□ -1.4
RNU6-28P-201ENST00000362378 TRIM67Q6ZTA4 783 aa6.31□□□□□ -1.4
RNU6-28P-201ENST00000362378 ZSCAN29Q8IWY8 852 aaPredicted RBP6.31□□□□□ -1.4
RNU6-28P-201ENST00000362378 MEIOBQ8N635 442 aa6.31□□□□□ -1.4
RNU6-28P-201ENST00000362378 RBCK1Q9BYM8 510 aa6.31□□□□□ -1.4
RNU6-28P-201ENST00000362378 LRFN2Q9ULH4 789 aa6.31□□□□□ -1.4
RNU6-28P-201ENST00000362378 TNFRSF10AO00220 468 aa6.3□□□□□ -1.4
RNU6-28P-201ENST00000362378 GFRA3O60609 400 aa6.3□□□□□ -1.4
RNU6-28P-201ENST00000362378 ZNF16P17020 682 aaPredicted RBP6.3□□□□□ -1.4
RNU6-28P-201ENST00000362378 RGL4Q8IZJ4 473 aa6.3□□□□□ -1.4
RNU6-28P-201ENST00000362378 L3MBTL2Q969R5 705 aa6.3□□□□□ -1.4
RNU6-28P-201ENST00000362378 CITED4Q96RK1 184 aa6.3□□□□□ -1.4
RNU6-28P-201ENST00000362378 ZSCAN10Q96SZ4 725 aaPredicted RBP6.3□□□□□ -1.4
RNU6-28P-201ENST00000362378 BCL2L13Q9BXK5 485 aa6.3□□□□□ -1.4
RNU6-28P-201ENST00000362378 NIFKQ9BYG3 293 aaKnown RBP6.3□□□□□ -1.4
RNU6-28P-201ENST00000362378 GRIP2Q9C0E4 1043 aa6.3□□□□□ -1.4
RNU6-28P-201ENST00000362378 ZNF395Q9H8N7 513 aaPredicted RBP6.3□□□□□ -1.4
RNU6-28P-201ENST00000362378 CABP1Q9NZU7 370 aa6.3□□□□□ -1.4
RNU6-28P-201ENST00000362378 EIF1AXP47813 144 aaKnown RBP6.29□□□□□ -1.4
RNU6-28P-201ENST00000362378 RNF144AP50876 292 aaPredicted RBP6.29□□□□□ -1.4
RNU6-28P-201ENST00000362378 RTN1Q16799 776 aa6.29□□□□□ -1.4
RNU6-28P-201ENST00000362378 SH3PXD2AQ5TCZ1 1133 aa6.29□□□□□ -1.4
RNU6-28P-201ENST00000362378 C1orf53Q5VUE5 145 aa6.29□□□□□ -1.4
RNU6-28P-201ENST00000362378 FBXO33Q7Z6M2 555 aa6.29□□□□□ -1.4
RNU6-28P-201ENST00000362378 ALDH16A1Q8IZ83 802 aa6.29□□□□□ -1.4
RNU6-28P-201ENST00000362378 ABTB2Q8N961 1025 aa6.29□□□□□ -1.4
RNU6-28P-201ENST00000362378 RHBDD1Q8TEB9 315 aa6.29□□□□□ -1.4
RNU6-28P-201ENST00000362378 HPS1Q92902 700 aa6.29□□□□□ -1.4
RNU6-28P-201ENST00000362378 TSEN34Q9BSV6 310 aaKnown RBP6.29□□□□□ -1.4
RNU6-28P-201ENST00000362378 NDUFB5O43674 189 aa6.28□□□□□ -1.4
RNU6-28P-201ENST00000362378 FZD6O60353 706 aa6.28□□□□□ -1.4
RNU6-28P-201ENST00000362378 BRD2P25440 801 aaKnown RBP6.28□□□□□ -1.4
RNU6-28P-201ENST00000362378 C11orf91Q3C1V1 193 aa6.28□□□□□ -1.4
RNU6-28P-201ENST00000362378 TMEM214Q6NUQ4 689 aaKnown RBP6.28□□□□□ -1.4
RNU6-28P-201ENST00000362378 BRPF3Q9ULD4 1205 aa6.28□□□□□ -1.4
RNU6-28P-201ENST00000362378 ZNF232Q9UNY5 417 aa6.28□□□□□ -1.4
RNU6-28P-201ENST00000362378 HCN4Q9Y3Q4 1203 aa6.28□□□□□ -1.4
RNU6-28P-201ENST00000362378 SPINT1O43278 529 aa6.27□□□□□ -1.41
RNU6-28P-201ENST00000362378 GTF2E1P29083 439 aaPredicted RBP6.27□□□□□ -1.41
RNU6-28P-201ENST00000362378 FAM26DQ5JW98 314 aa6.27□□□□□ -1.41
RNU6-28P-201ENST00000362378 TMC7Q7Z402 723 aa6.27□□□□□ -1.41
RNU6-28P-201ENST00000362378 GIPC2Q8TF65 315 aa6.27□□□□□ -1.41
RNU6-28P-201ENST00000362378 NGLY1Q96IV0 654 aa6.27□□□□□ -1.41
RNU6-28P-201ENST00000362378 PHACTR1Q9C0D0 580 aa6.27□□□□□ -1.41
RNU6-28P-201ENST00000362378 SPATA31C2B4DYI2 1134 aa6.26□□□□□ -1.41
RNU6-28P-201ENST00000362378 ZBTB39O15060 712 aa6.26□□□□□ -1.41
RNU6-28P-201ENST00000362378 DGKZQ13574 1117 aa6.26□□□□□ -1.41
RNU6-28P-201ENST00000362378 ZNF326Q5BKZ1 582 aaKnown RBP6.26□□□□□ -1.41
RNU6-28P-201ENST00000362378 GNASQ5JWF2 1037 aa6.26□□□□□ -1.41
RNU6-28P-201ENST00000362378 SLC27A3Q5K4L6 730 aa6.26□□□□□ -1.41
RNU6-28P-201ENST00000362378 C7orf43Q8WVR3 580 aa6.26□□□□□ -1.41
RNU6-28P-201ENST00000362378 CCDC87Q9NVE4 849 aa6.26□□□□□ -1.41
RNU6-28P-201ENST00000362378 KIAA1522Q9P206 1035 aaPredicted RBP6.26□□□□□ -1.41
RNU6-28P-201ENST00000362378 PARP3Q9Y6F1 533 aa6.26□□□□□ -1.41
RNU6-28P-201ENST00000362378 CAPN5O15484 640 aaPredicted RBP6.25□□□□□ -1.41
RNU6-28P-201ENST00000362378 TREHO43280 583 aa6.25□□□□□ -1.41
RNU6-28P-201ENST00000362378 IGHA2P01877 340 aa6.25□□□□□ -1.41
RNU6-28P-201ENST00000362378 C4orf17Q53FE4 359 aa6.25□□□□□ -1.41
RNU6-28P-201ENST00000362378 ETFBKMTQ8IXQ9 262 aa6.25□□□□□ -1.41
RNU6-28P-201ENST00000362378 LINC00528Q8N1L1 170 aa6.25□□□□□ -1.41
RNU6-28P-201ENST00000362378 MRRFQ96E11 262 aaKnown RBP6.25□□□□□ -1.41
RNU6-28P-201ENST00000362378 IFT43Q96FT9 208 aa6.25□□□□□ -1.41
RNU6-28P-201ENST00000362378 INSM2Q96T92 566 aaPredicted RBP6.25□□□□□ -1.41
RNU6-28P-201ENST00000362378 FAM129BQ96TA1 746 aa6.25□□□□□ -1.41
RNU6-28P-201ENST00000362378 ZDHHC3Q9NYG2 299 aa6.25□□□□□ -1.41
RNU6-28P-201ENST00000362378 VAMP1P23763 118 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms