RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 CABLES1Q8TDN4 633 aa23.16■■□□□ 1.3
CMTM3-201ENST00000361909 RTF1Q92541 710 aaKnown RBP23.16■■□□□ 1.3
CMTM3-201ENST00000361909 HMGN5P82970 282 aaKnown RBP23.16■■□□□ 1.3
CMTM3-201ENST00000361909 PLEKHM2Q8IWE5 1019 aa23.16■■□□□ 1.3
CMTM3-201ENST00000361909 DCTN1Q14203 1278 aa23.15■■□□□ 1.3
CMTM3-201ENST00000361909 MYRIPQ8NFW9 859 aa23.15■■□□□ 1.3
CMTM3-201ENST00000361909 LMO7Q8WWI1 1683 aa23.15■■□□□ 1.3
CMTM3-201ENST00000361909 SIRT2Q8IXJ6 389 aa23.14■■□□□ 1.3
CMTM3-201ENST00000361909 USHBP1Q8N6Y0 703 aa23.14■■□□□ 1.3
CMTM3-201ENST00000361909 API5Q9BZZ5 524 aaKnown RBP23.14■■□□□ 1.3
CMTM3-201ENST00000361909 MBIPQ9NS73 344 aa23.14■■□□□ 1.3
CMTM3-201ENST00000361909 GNAT3A8MTJ3 354 aa23.14■■□□□ 1.29
CMTM3-201ENST00000361909 LRRC59Q96AG4 307 aaKnown RBP23.14■■□□□ 1.29
CMTM3-201ENST00000361909 FAM208AQ9UK61 1670 aaKnown RBP23.13■■□□□ 1.29
CMTM3-201ENST00000361909 PHF14O94880 888 aa23.13■■□□□ 1.29
CMTM3-201ENST00000361909 REC8O95072 547 aa23.13■■□□□ 1.29
CMTM3-201ENST00000361909 TMEM63CQ9P1W3 806 aa23.13■■□□□ 1.29
CMTM3-201ENST00000361909 CRB1P82279 1406 aa23.13■■□□□ 1.29
CMTM3-201ENST00000361909 CHL1O00533 1208 aa23.13■■□□□ 1.29
CMTM3-201ENST00000361909 MCM2P49736 904 aa23.13■■□□□ 1.29
CMTM3-201ENST00000361909 MCM10Q7L590 875 aa23.13■■□□□ 1.29
CMTM3-201ENST00000361909 DCTPP1Q9H773 170 aa23.13■■□□□ 1.29
CMTM3-201ENST00000361909 AMOTQ4VCS5 1084 aa23.12■■□□□ 1.29
CMTM3-201ENST00000361909 KLHL34Q8N239 644 aa23.12■■□□□ 1.29
CMTM3-201ENST00000361909 FAM184AQ8NB25 1140 aa23.12■■□□□ 1.29
CMTM3-201ENST00000361909 KIAA0232Q92628 1395 aa23.12■■□□□ 1.29
CMTM3-201ENST00000361909 GTF2F1P35269 517 aaKnown RBP eCLIP23.11■■□□□ 1.29
CMTM3-201ENST00000361909 ROBO1Q9Y6N7 1651 aa23.11■■□□□ 1.29
CMTM3-201ENST00000361909 MAP3K5Q99683 1374 aa23.11■■□□□ 1.29
CMTM3-201ENST00000361909 VAMP4O75379 141 aa23.11■■□□□ 1.29
CMTM3-201ENST00000361909 AHDC1Q5TGY3 1603 aaPredicted RBP23.11■■□□□ 1.29
CMTM3-201ENST00000361909 PLEKHG2Q9H7P9 1386 aa23.11■■□□□ 1.29
CMTM3-201ENST00000361909 SYCE3A1L190 88 aa23.1■■□□□ 1.29
CMTM3-201ENST00000361909 UVSSAQ2YD98 709 aa23.1■■□□□ 1.29
CMTM3-201ENST00000361909 TSPY26PQ9H489 355 aa23.1■■□□□ 1.29
CMTM3-201ENST00000361909 ABCA3Q99758 1704 aa23.1■■□□□ 1.29
CMTM3-201ENST00000361909 DMTNQ08495 405 aa23.1■■□□□ 1.29
CMTM3-201ENST00000361909 PLEKHO1Q53GL0 409 aaPredicted RBP23.1■■□□□ 1.29
CMTM3-201ENST00000361909 RBM27Q9P2N5 1060 aaKnown RBP23.1■■□□□ 1.29
CMTM3-201ENST00000361909 ZDHHC9Q9Y397 364 aa23.1■■□□□ 1.29
CMTM3-201ENST00000361909 PKP1Q13835 747 aa23.09■■□□□ 1.29
CMTM3-201ENST00000361909 LRRC37A3O60309 1634 aa23.09■■□□□ 1.29
CMTM3-201ENST00000361909 PTMAP06454 111 aaKnown RBP23.08■■□□□ 1.29
CMTM3-201ENST00000361909 C1orf115Q9H7X2 142 aa23.08■■□□□ 1.29
CMTM3-201ENST00000361909 BABAM1Q9NWV8 329 aa23.07■■□□□ 1.28
CMTM3-201ENST00000361909 HAP1P54257 671 aaPredicted RBP23.07■■□□□ 1.28
CMTM3-201ENST00000361909 PODXL2Q9NZ53 605 aa23.07■■□□□ 1.28
CMTM3-201ENST00000361909 CHRNA2Q15822 529 aa23.06■■□□□ 1.28
CMTM3-201ENST00000361909 PIBF1Q8WXW3 757 aa23.06■■□□□ 1.28
CMTM3-201ENST00000361909 AKAP4Q5JQC9 854 aa23.05■■□□□ 1.28
CMTM3-201ENST00000361909 ZGPATQ8N5A5 531 aaKnown RBP23.05■■□□□ 1.28
CMTM3-201ENST00000361909 PRDM11Q9NQV5 511 aa23.05■■□□□ 1.28
CMTM3-201ENST00000361909 GTPBP4Q9BZE4 634 aaKnown RBP23.04■■□□□ 1.28
CMTM3-201ENST00000361909 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.04■■□□□ 1.28
CMTM3-201ENST00000361909 BRD1O95696 1058 aa23.04■■□□□ 1.28
CMTM3-201ENST00000361909 TWISTNBQ3B726 338 aaPredicted RBP23.04■■□□□ 1.28
CMTM3-201ENST00000361909 RPAP2Q8IXW5 612 aaPredicted RBP23.04■■□□□ 1.28
CMTM3-201ENST00000361909 IL17REQ8NFR9 667 aa23.04■■□□□ 1.28
CMTM3-201ENST00000361909 NLRP2Q9NX02 1062 aa23.04■■□□□ 1.28
CMTM3-201ENST00000361909 CEMIPQ8WUJ3 1361 aa23.04■■□□□ 1.28
CMTM3-201ENST00000361909 INTS4Q96HW7 963 aaKnown RBP23.03■■□□□ 1.28
CMTM3-201ENST00000361909 ATP10DQ9P241 1426 aa23.03■■□□□ 1.28
CMTM3-201ENST00000361909 ERC2O15083 957 aa23.03■■□□□ 1.28
CMTM3-201ENST00000361909 ANKRD44Q8N8A2 993 aa23.03■■□□□ 1.28
CMTM3-201ENST00000361909 CSB-PGBD3P0DP91 1061 aa23.02■■□□□ 1.28
CMTM3-201ENST00000361909 TSPYL6Q8N831 410 aa23.02■■□□□ 1.28
CMTM3-201ENST00000361909 C8orf58Q8NAV2 365 aa23.02■■□□□ 1.28
CMTM3-201ENST00000361909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.02■■□□□ 1.28
CMTM3-201ENST00000361909 RAPGEF4Q8WZA2 1011 aa23.01■■□□□ 1.27
CMTM3-201ENST00000361909 COL22A1Q8NFW1 1626 aaPredicted RBP23.01■■□□□ 1.27
CMTM3-201ENST00000361909 CUL4AQ13619 759 aa23.01■■□□□ 1.27
CMTM3-201ENST00000361909 ZNF530Q6P9A1 599 aaPredicted RBP23.01■■□□□ 1.27
CMTM3-201ENST00000361909 OVOS2A0A0G2JMS6 1433 aa23■■□□□ 1.27
CMTM3-201ENST00000361909 TOM1O60784 492 aa23■■□□□ 1.27
CMTM3-201ENST00000361909 SDSP20132 328 aa23■■□□□ 1.27
CMTM3-201ENST00000361909 TAF7Q15545 349 aaPredicted RBP23■■□□□ 1.27
CMTM3-201ENST00000361909 TSPYL4Q9UJ04 414 aa23■■□□□ 1.27
CMTM3-201ENST00000361909 WDR17Q8IZU2 1322 aa22.99■■□□□ 1.27
CMTM3-201ENST00000361909 KIF20AO95235 890 aa22.99■■□□□ 1.27
CMTM3-201ENST00000361909 C1orf141Q5JVX7 400 aa22.99■■□□□ 1.27
CMTM3-201ENST00000361909 DNTTIP2Q5QJE6 756 aaKnown RBP22.99■■□□□ 1.27
CMTM3-201ENST00000361909 ZSCAN20P17040 1043 aaPredicted RBP22.99■■□□□ 1.27
CMTM3-201ENST00000361909 TATP17735 454 aaPredicted RBP22.99■■□□□ 1.27
CMTM3-201ENST00000361909 SPTLC3Q9NUV7 552 aa22.99■■□□□ 1.27
CMTM3-201ENST00000361909 LETM1O95202 739 aaPredicted RBP22.98■■□□□ 1.27
CMTM3-201ENST00000361909 COL5A2P05997 1499 aaPredicted RBP22.97■■□□□ 1.27
CMTM3-201ENST00000361909 ANAPC15P60006 121 aa22.97■■□□□ 1.27
CMTM3-201ENST00000361909 NSFL1CQ9UNZ2 370 aaKnown RBP22.97■■□□□ 1.27
CMTM3-201ENST00000361909 SOS1Q07889 1333 aaPredicted RBP22.97■■□□□ 1.27
CMTM3-201ENST00000361909 NOLC1Q14978 699 aaKnown RBP eCLIP22.96■■□□□ 1.27
CMTM3-201ENST00000361909 RNF214Q8ND24 703 aa22.96■■□□□ 1.27
CMTM3-201ENST00000361909 IL17RAQ96F46 866 aa22.96■■□□□ 1.27
CMTM3-201ENST00000361909 TMX3Q96JJ7 454 aa22.96■■□□□ 1.27
CMTM3-201ENST00000361909 OSBPL3Q9H4L5 887 aa22.96■■□□□ 1.27
CMTM3-201ENST00000361909 SPG7Q9UQ90 795 aa22.96■■□□□ 1.27
CMTM3-201ENST00000361909 ELL2O00472 640 aaPredicted RBP22.96■■□□□ 1.27
CMTM3-201ENST00000361909 MCCP23508 829 aa22.96■■□□□ 1.27
CMTM3-201ENST00000361909 FKBP5Q13451 457 aaPredicted RBP22.96■■□□□ 1.27
CMTM3-201ENST00000361909 KIF3AQ9Y496 699 aa22.96■■□□□ 1.27
CMTM3-201ENST00000361909 TUBGCP6Q96RT7 1819 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms