RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 C1orf141Q5JVX7 400 aa21.66■■□□□ 1.06
COPE-202ENST00000349893 ZPR1O75312 459 aa21.65■■□□□ 1.06
COPE-202ENST00000349893 USPL1Q5W0Q7 1092 aa21.65■■□□□ 1.06
COPE-202ENST00000349893 AEBP1Q8IUX7 1158 aa21.65■■□□□ 1.06
COPE-202ENST00000349893 NFIXQ14938 502 aa21.64■■□□□ 1.05
COPE-202ENST00000349893 MRC1P22897 1456 aa21.64■■□□□ 1.05
COPE-202ENST00000349893 NARFQ9UHQ1 456 aa21.63■■□□□ 1.05
COPE-202ENST00000349893 CCDC88AQ3V6T2 1871 aa21.62■■□□□ 1.05
COPE-202ENST00000349893 POTECB2RU33 542 aa21.62■■□□□ 1.05
COPE-202ENST00000349893 DNAJC10Q8IXB1 793 aa21.62■■□□□ 1.05
COPE-202ENST00000349893 TTLL6Q8N841 843 aa21.62■■□□□ 1.05
COPE-202ENST00000349893 NFKBIEO00221 500 aa21.61■■□□□ 1.05
COPE-202ENST00000349893 CYP19A1P11511 503 aaPredicted RBP21.61■■□□□ 1.05
COPE-202ENST00000349893 BCL2L12Q9HB09 334 aa21.61■■□□□ 1.05
COPE-202ENST00000349893 COL15A1P39059 1388 aa21.61■■□□□ 1.05
COPE-202ENST00000349893 SLC52A2Q9HAB3 445 aa21.6■■□□□ 1.05
COPE-202ENST00000349893 DICER1Q9UPY3 1922 aaKnown RBP21.59■■□□□ 1.05
COPE-202ENST00000349893 SERPINB2P05120 415 aa21.58■■□□□ 1.05
COPE-202ENST00000349893 AKAP4Q5JQC9 854 aa21.58■■□□□ 1.05
COPE-202ENST00000349893 SULT6B1Q6IMI4 303 aa21.57■■□□□ 1.04
COPE-202ENST00000349893 ZBTB1Q9Y2K1 713 aa21.57■■□□□ 1.04
COPE-202ENST00000349893 CARMIL3Q8ND23 1372 aa21.57■■□□□ 1.04
COPE-202ENST00000349893 FER1L6Q2WGJ9 1857 aa21.56■■□□□ 1.04
COPE-202ENST00000349893 C2CD5Q86YS7 1000 aa21.56■■□□□ 1.04
COPE-202ENST00000349893 VIRMAQ69YN4 1812 aaKnown RBP21.55■■□□□ 1.04
COPE-202ENST00000349893 H0YIN7 160 aa21.55■■□□□ 1.04
COPE-202ENST00000349893 IL13P35225 146 aa21.55■■□□□ 1.04
COPE-202ENST00000349893 VSIG10Q8N0Z9 540 aa21.55■■□□□ 1.04
COPE-202ENST00000349893 CREBZFQ9NS37 354 aa21.55■■□□□ 1.04
COPE-202ENST00000349893 UBR2Q8IWV8 1755 aa21.55■■□□□ 1.04
COPE-202ENST00000349893 ANKRD31Q8N7Z5 1873 aa21.55■■□□□ 1.04
COPE-202ENST00000349893 DPY19L2Q6NUT2 758 aa21.54■■□□□ 1.04
COPE-202ENST00000349893 LGR6Q9HBX8 967 aa21.54■■□□□ 1.04
COPE-202ENST00000349893 TIMELESSQ9UNS1 1208 aa21.54■■□□□ 1.04
COPE-202ENST00000349893 PANK3Q9H999 370 aa21.53■■□□□ 1.04
COPE-202ENST00000349893 PDZRN3Q9UPQ7 1066 aa21.53■■□□□ 1.04
COPE-202ENST00000349893 LTBP3Q9NS15 1303 aa21.53■■□□□ 1.04
COPE-202ENST00000349893 RNMTO43148 476 aaKnown RBP21.51■■□□□ 1.03
COPE-202ENST00000349893 SLC39A6Q13433 755 aa21.51■■□□□ 1.03
COPE-202ENST00000349893 COL11A2P13942 1736 aaPredicted RBP21.51■■□□□ 1.03
COPE-202ENST00000349893 SCN7AQ01118 1682 aa21.5■■□□□ 1.03
COPE-202ENST00000349893 EIF5P55010 431 aaKnown RBP21.5■■□□□ 1.03
COPE-202ENST00000349893 CHADLQ6NUI6 762 aa21.5■■□□□ 1.03
COPE-202ENST00000349893 ERFEQ4G0M1 354 aa21.49■■□□□ 1.03
COPE-202ENST00000349893 MORC1Q86VD1 984 aa21.49■■□□□ 1.03
COPE-202ENST00000349893 BRIP1Q9BX63 1249 aa21.49■■□□□ 1.03
COPE-202ENST00000349893 POLR3GLQ9BT43 218 aa21.48■■□□□ 1.03
COPE-202ENST00000349893 PDE6BP35913 854 aa21.47■■□□□ 1.03
COPE-202ENST00000349893 PRDM10Q9NQV6 1147 aa21.47■■□□□ 1.03
COPE-202ENST00000349893 CNTNAP1P78357 1384 aa21.47■■□□□ 1.03
COPE-202ENST00000349893 A0A087WZG4 1122 aa21.46■■□□□ 1.03
COPE-202ENST00000349893 C21orf2O43822 256 aa21.46■■□□□ 1.03
COPE-202ENST00000349893 PASKQ96RG2 1323 aa21.46■■□□□ 1.03
COPE-202ENST00000349893 ARFGEF2Q9Y6D5 1785 aa21.46■■□□□ 1.03
COPE-202ENST00000349893 TBC1D9BQ66K14 1250 aa21.45■■□□□ 1.02
COPE-202ENST00000349893 MKRN1Q9UHC7 482 aaKnown RBP21.45■■□□□ 1.02
COPE-202ENST00000349893 SCN4AP35499 1836 aa21.44■■□□□ 1.02
COPE-202ENST00000349893 FOXN1O15353 648 aa21.44■■□□□ 1.02
COPE-202ENST00000349893 STARD3NLO95772 234 aa21.44■■□□□ 1.02
COPE-202ENST00000349893 POTEIP0CG38 1075 aa21.44■■□□□ 1.02
COPE-202ENST00000349893 POTEJP0CG39 1038 aa21.44■■□□□ 1.02
COPE-202ENST00000349893 CANXP27824 592 aaKnown RBP21.44■■□□□ 1.02
COPE-202ENST00000349893 PRR5LQ6MZQ0 368 aa21.44■■□□□ 1.02
COPE-202ENST00000349893 TAOK3Q9H2K8 898 aa21.44■■□□□ 1.02
COPE-202ENST00000349893 BICDL1Q6ZP65 573 aa21.43■■□□□ 1.02
COPE-202ENST00000349893 ZNF622Q969S3 477 aaKnown RBP eCLIP21.43■■□□□ 1.02
COPE-202ENST00000349893 L3MBTL3Q96JM7 780 aaPredicted RBP21.43■■□□□ 1.02
COPE-202ENST00000349893 SLX4Q8IY92 1834 aa21.43■■□□□ 1.02
COPE-202ENST00000349893 DDNO94850 711 aaPredicted RBP21.42■■□□□ 1.02
COPE-202ENST00000349893 MTHFSDQ2M296 383 aaKnown RBP21.42■■□□□ 1.02
COPE-202ENST00000349893 STYK1Q6J9G0 422 aa21.41■■□□□ 1.02
COPE-202ENST00000349893 LDHDQ86WU2 507 aa21.41■■□□□ 1.02
COPE-202ENST00000349893 IQCA1LA6NCM1 817 aa21.4■■□□□ 1.02
COPE-202ENST00000349893 SOGA3Q5TF21 947 aa21.4■■□□□ 1.02
COPE-202ENST00000349893 CNKSR1Q969H4 720 aa21.4■■□□□ 1.02
COPE-202ENST00000349893 HEG1Q9ULI3 1381 aa21.39■■□□□ 1.02
COPE-202ENST00000349893 SIPA1L3O60292 1781 aaPredicted RBP21.39■■□□□ 1.01
COPE-202ENST00000349893 ADAMTSL1Q8N6G6 1762 aa21.39■■□□□ 1.01
COPE-202ENST00000349893 SRGNP10124 158 aa21.39■■□□□ 1.01
COPE-202ENST00000349893 IL6STP40189 918 aaPredicted RBP21.39■■□□□ 1.01
COPE-202ENST00000349893 HMOX1P09601 288 aa21.38■■□□□ 1.01
COPE-202ENST00000349893 CTCFP49711 727 aaPredicted RBP21.38■■□□□ 1.01
COPE-202ENST00000349893 AMER1Q5JTC6 1135 aaPredicted RBP21.38■■□□□ 1.01
COPE-202ENST00000349893 PRPF40BQ6NWY9 871 aaKnown RBP21.38■■□□□ 1.01
COPE-202ENST00000349893 ZNF496Q96IT1 587 aaPredicted RBP21.38■■□□□ 1.01
COPE-202ENST00000349893 TEX13AQ9BXU3 409 aaPredicted RBP21.38■■□□□ 1.01
COPE-202ENST00000349893 TAF1DQ9H5J8 278 aaPredicted RBP21.38■■□□□ 1.01
COPE-202ENST00000349893 ZNF219Q9P2Y4 722 aaPredicted RBP21.38■■□□□ 1.01
COPE-202ENST00000349893 BCORQ6W2J9 1755 aa21.38■■□□□ 1.01
COPE-202ENST00000349893 CACNA1SQ13698 1873 aa21.37■■□□□ 1.01
COPE-202ENST00000349893 ITGBL1O95965 494 aaPredicted RBP21.37■■□□□ 1.01
COPE-202ENST00000349893 EIF4G2P78344 907 aaKnown RBP eCLIP21.37■■□□□ 1.01
COPE-202ENST00000349893 TTC5Q8N0Z6 440 aa21.37■■□□□ 1.01
COPE-202ENST00000349893 CNBD1Q8NA66 436 aa21.37■■□□□ 1.01
COPE-202ENST00000349893 C7orf43Q8WVR3 580 aa21.37■■□□□ 1.01
COPE-202ENST00000349893 KNSTRNQ9Y448 316 aa21.37■■□□□ 1.01
COPE-202ENST00000349893 HSPA5P11021 654 aaKnown RBP21.36■■□□□ 1.01
COPE-202ENST00000349893 VEGFBP49765 207 aa21.36■■□□□ 1.01
COPE-202ENST00000349893 ZNF790Q6PG37 636 aa21.36■■□□□ 1.01
COPE-202ENST00000349893 CCDC24Q8N4L8 307 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms