RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 BICD1Q96G01 975 aa14.24□□□□□ -0.13
TRIOBP-202ENST00000344404 NAPBQ9H115 298 aa14.24□□□□□ -0.13
TRIOBP-202ENST00000344404 CDKL5O76039 1030 aa14.24□□□□□ -0.13
TRIOBP-202ENST00000344404 ANKRD1Q15327 319 aa14.24□□□□□ -0.13
TRIOBP-202ENST00000344404 APBB1IPQ7Z5R6 666 aaPredicted RBP14.24□□□□□ -0.13
TRIOBP-202ENST00000344404 SNAPC4Q5SXM2 1469 aa14.24□□□□□ -0.13
TRIOBP-202ENST00000344404 CCT4P50991 539 aaKnown RBP14.24□□□□□ -0.13
TRIOBP-202ENST00000344404 HOOK3Q86VS8 718 aa14.24□□□□□ -0.13
TRIOBP-202ENST00000344404 EXOC6BQ9Y2D4 811 aa14.24□□□□□ -0.13
TRIOBP-202ENST00000344404 ANKRD50Q9ULJ7 1429 aa14.24□□□□□ -0.13
TRIOBP-202ENST00000344404 CCDC192P0DO97 292 aa14.24□□□□□ -0.13
TRIOBP-202ENST00000344404 IFIT5Q13325 482 aaKnown RBP14.24□□□□□ -0.13
TRIOBP-202ENST00000344404 ISM2Q6H9L7 571 aa14.24□□□□□ -0.13
TRIOBP-202ENST00000344404 FERMT3Q86UX7 667 aa14.23□□□□□ -0.13
TRIOBP-202ENST00000344404 IFIT1P09914 478 aaKnown RBP14.23□□□□□ -0.13
TRIOBP-202ENST00000344404 CFAP100Q494V2 611 aa14.23□□□□□ -0.13
TRIOBP-202ENST00000344404 OTUD6BQ8N6M0 293 aa14.23□□□□□ -0.13
TRIOBP-202ENST00000344404 CPLX3Q8WVH0 158 aa14.23□□□□□ -0.13
TRIOBP-202ENST00000344404 RFX1P22670 979 aa14.23□□□□□ -0.13
TRIOBP-202ENST00000344404 EAPPQ56P03 285 aaPredicted RBP14.23□□□□□ -0.13
TRIOBP-202ENST00000344404 PPM1EQ8WY54 764 aa14.23□□□□□ -0.13
TRIOBP-202ENST00000344404 CCDC8Q9H0W5 538 aaPredicted RBP14.23□□□□□ -0.13
TRIOBP-202ENST00000344404 SYCP3Q8IZU3 236 aa14.22□□□□□ -0.13
TRIOBP-202ENST00000344404 EIF3JO75822 258 aaKnown RBP14.22□□□□□ -0.13
TRIOBP-202ENST00000344404 IFFO1Q0D2I5 559 aa14.22□□□□□ -0.13
TRIOBP-202ENST00000344404 TCERG1LQ5VWI1 586 aa14.22□□□□□ -0.13
TRIOBP-202ENST00000344404 ZBTB9Q96C00 473 aa14.22□□□□□ -0.13
TRIOBP-202ENST00000344404 KRT85P78386 507 aa14.22□□□□□ -0.13
TRIOBP-202ENST00000344404 PRPF4BQ13523 1007 aaKnown RBP14.22□□□□□ -0.13
TRIOBP-202ENST00000344404 BEGAINQ9BUH8 593 aa14.22□□□□□ -0.13
TRIOBP-202ENST00000344404 CCDC66A2RUB6 948 aa14.22□□□□□ -0.13
TRIOBP-202ENST00000344404 DMRT2Q9Y5R5 561 aa14.22□□□□□ -0.13
TRIOBP-202ENST00000344404 FAM212AQ96EL1 285 aa14.22□□□□□ -0.13
TRIOBP-202ENST00000344404 NLRP5P59047 1200 aa14.21□□□□□ -0.13
TRIOBP-202ENST00000344404 CCT2P78371 535 aaKnown RBP14.21□□□□□ -0.13
TRIOBP-202ENST00000344404 TSG101Q99816 390 aa14.21□□□□□ -0.13
TRIOBP-202ENST00000344404 ZNF287Q9HBT7 754 aa14.21□□□□□ -0.13
TRIOBP-202ENST00000344404 IQCEQ6IPM2 695 aa14.21□□□□□ -0.13
TRIOBP-202ENST00000344404 CCDC83Q8IWF9 413 aa14.21□□□□□ -0.13
TRIOBP-202ENST00000344404 UPF3BQ9BZI7 483 aaKnown RBP14.21□□□□□ -0.13
TRIOBP-202ENST00000344404 CBFA2T2O43439 604 aa14.21□□□□□ -0.13
TRIOBP-202ENST00000344404 SLC5A1P13866 664 aa14.21□□□□□ -0.13
TRIOBP-202ENST00000344404 NBPF8Q3BBV2 869 aa14.21□□□□□ -0.14
TRIOBP-202ENST00000344404 NBPF14Q5TI25 921 aa14.21□□□□□ -0.14
TRIOBP-202ENST00000344404 PNISRQ8TF01 805 aaKnown RBP14.21□□□□□ -0.14
TRIOBP-202ENST00000344404 SP4Q02446 784 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 CCDC148Q8NFR7 591 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 RBM25P49756 843 aaKnown RBP14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 ATP2B3Q16720 1220 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 AKNAD1Q5T1N1 836 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 LMTK3Q96Q04 1460 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 MYCP01106 439 aaPredicted RBP14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 PPP2R1AP30153 589 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 LRSAM1Q6UWE0 723 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 NME9Q86XW9 330 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 PANK2Q9BZ23 570 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 SNRKQ9NRH2 765 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 CTNNA3Q9UI47 895 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 NAIPQ13075 1403 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 NCKAP5LQ9HCH0 1330 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 FERP16591 822 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 SPA17Q15506 151 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 TDRD12Q587J7 1177 aaKnown RBP14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 AEBP1Q8IUX7 1158 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 KCNH5Q8NCM2 988 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 SETDB2Q96T68 719 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 CIZ1Q9ULV3 898 aaPredicted RBP14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 F6X3S4 739 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 PRC1O43663 620 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 ERLIN1O75477 346 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 FBLN1P23142 703 aa14.2□□□□□ -0.14
TRIOBP-202ENST00000344404 LMOD1P29536 600 aaPredicted RBP14.19□□□□□ -0.14
TRIOBP-202ENST00000344404 ZWINTO95229 277 aa14.19□□□□□ -0.14
TRIOBP-202ENST00000344404 GPR162Q16538 588 aa14.19□□□□□ -0.14
TRIOBP-202ENST00000344404 PARP3Q9Y6F1 533 aa14.19□□□□□ -0.14
TRIOBP-202ENST00000344404 PRKCSHP14314 528 aaPredicted RBP14.19□□□□□ -0.14
TRIOBP-202ENST00000344404 ANKRD18BA2A2Z9 1011 aa14.18□□□□□ -0.14
TRIOBP-202ENST00000344404 CEP131Q9UPN4 1083 aa14.18□□□□□ -0.14
TRIOBP-202ENST00000344404 SH3BP5O60239 455 aa14.18□□□□□ -0.14
TRIOBP-202ENST00000344404 ARHGAP29Q52LW3 1261 aa14.18□□□□□ -0.14
TRIOBP-202ENST00000344404 DUSP27Q5VZP5 1158 aa14.18□□□□□ -0.14
TRIOBP-202ENST00000344404 PHF8Q9UPP1 1060 aa14.18□□□□□ -0.14
TRIOBP-202ENST00000344404 LUZP1Q86V48 1076 aa14.18□□□□□ -0.14
TRIOBP-202ENST00000344404 PRPF40BQ6NWY9 871 aaKnown RBP14.17□□□□□ -0.14
TRIOBP-202ENST00000344404 SLC12A7Q9Y666 1083 aa14.17□□□□□ -0.14
TRIOBP-202ENST00000344404 WASF1Q92558 559 aa14.17□□□□□ -0.14
TRIOBP-202ENST00000344404 TSNARE1Q96NA8 513 aa14.17□□□□□ -0.14
TRIOBP-202ENST00000344404 CABP5Q9NP86 173 aa14.17□□□□□ -0.14
TRIOBP-202ENST00000344404 ZBTB21Q9ULJ3 1066 aa14.17□□□□□ -0.14
TRIOBP-202ENST00000344404 RNF187Q5TA31 235 aaPredicted RBP14.17□□□□□ -0.14
TRIOBP-202ENST00000344404 CTCFLQ8NI51 663 aaPredicted RBP14.17□□□□□ -0.14
TRIOBP-202ENST00000344404 SRRTQ9BXP5 876 aaKnown RBP14.17□□□□□ -0.14
TRIOBP-202ENST00000344404 SYNCQ9H7C4 482 aa14.17□□□□□ -0.14
TRIOBP-202ENST00000344404 ANXA1P04083 346 aa14.17□□□□□ -0.14
TRIOBP-202ENST00000344404 HAND2P61296 217 aa14.17□□□□□ -0.14
TRIOBP-202ENST00000344404 OGFOD1Q8N543 542 aa14.17□□□□□ -0.14
TRIOBP-202ENST00000344404 PROCA1Q8NCQ7 364 aaPredicted RBP14.17□□□□□ -0.14
TRIOBP-202ENST00000344404 TMCO3Q6UWJ1 677 aa14.17□□□□□ -0.14
TRIOBP-202ENST00000344404 FKBP15Q5T1M5 1219 aa14.16□□□□□ -0.14
TRIOBP-202ENST00000344404 IFIT3O14879 490 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms