RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 TSKSQ9UJT2 592 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 ATL3Q6DD88 541 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 LRRC2Q9BYS8 371 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 RSPH14Q9UHP6 348 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 MTCL1Q9Y4B5 1905 aaKnown RBP4.17□□□□□ -1.74
SYNE1-201ENST00000341594 WDR63Q8IWG1 891 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 RNF216Q9NWF9 866 aaPredicted RBP4.17□□□□□ -1.74
SYNE1-201ENST00000341594 KDM5BQ9UGL1 1544 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 GOLGA6L19H0YKK7 550 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 SOS1Q07889 1333 aaPredicted RBP4.17□□□□□ -1.74
SYNE1-201ENST00000341594 PHLDB2Q86SQ0 1253 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 TEX2Q8IWB9 1127 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 GTF3C6Q969F1 213 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 TDO2P48775 406 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 DNMBPQ6XZF7 1577 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 GIMAP7Q8NHV1 300 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 PTPRGP23470 1445 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 GOLIM4O00461 696 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 RAI14Q9P0K7 980 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 ABCC11Q96J66 1382 aa4.17□□□□□ -1.74
SYNE1-201ENST00000341594 ZNF445P59923 1031 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 WDR7Q9Y4E6 1490 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 NRBP1Q9UHY1 535 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 NBPF1Q3BBV0 1214 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 MCM3P25205 808 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 TRAIPQ9BWF2 469 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 NOL7Q9UMY1 257 aaKnown RBP4.16□□□□□ -1.74
SYNE1-201ENST00000341594 CDK13Q14004 1512 aaKnown RBP4.16□□□□□ -1.74
SYNE1-201ENST00000341594 INCENPQ9NQS7 918 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 MKRN1Q9UHC7 482 aaKnown RBP4.16□□□□□ -1.74
SYNE1-201ENST00000341594 NAIPQ13075 1403 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 ATP10AO60312 1499 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 APLFQ8IW19 511 aaPredicted RBP4.16□□□□□ -1.74
SYNE1-201ENST00000341594 CCDC94Q9BW85 323 aaPredicted RBP4.16□□□□□ -1.74
SYNE1-201ENST00000341594 REC8O95072 547 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 FAM182AQ5T1J6 154 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 SOGA1O94964 1423 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 ELP1O95163 1332 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 GPRASP1Q5JY77 1395 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 GTF2A1P52655 376 aaPredicted RBP4.16□□□□□ -1.74
SYNE1-201ENST00000341594 RABEP1Q15276 862 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 KIF4AO95239 1232 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 EPRSP07814 1512 aaKnown RBP4.16□□□□□ -1.74
SYNE1-201ENST00000341594 SLMAPQ14BN4 828 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 SPATS2Q86XZ4 545 aaKnown RBP4.16□□□□□ -1.74
SYNE1-201ENST00000341594 BRMS1Q9HCU9 246 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 ARAP1Q96P48 1450 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 SECISBP2LQ93073 1101 aaKnown RBP4.16□□□□□ -1.74
SYNE1-201ENST00000341594 KIF7Q2M1P5 1343 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 RIPPLY1Q0D2K3 151 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 ARID5BQ14865 1188 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 SLFNL1Q499Z3 407 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 MYL6BP14649 208 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 PDCP20941 246 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 OTUD7BQ6GQQ9 843 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 TAX1BP1Q86VP1 789 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 TSR1Q2NL82 804 aaKnown RBP4.16□□□□□ -1.74
SYNE1-201ENST00000341594 ERFP50548 548 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 LMOD3Q0VAK6 560 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 ZNF219Q9P2Y4 722 aaPredicted RBP4.16□□□□□ -1.74
SYNE1-201ENST00000341594 SYNMO15061 1565 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 IL16Q14005 1332 aa4.16□□□□□ -1.74
SYNE1-201ENST00000341594 KCNJ6P48051 423 aa4.15□□□□□ -1.74
SYNE1-201ENST00000341594 NAP1L4Q99733 375 aaKnown RBP4.15□□□□□ -1.74
SYNE1-201ENST00000341594 TRIM5Q9C035 493 aa4.15□□□□□ -1.74
SYNE1-201ENST00000341594 ABCA10Q8WWZ4 1543 aa4.15□□□□□ -1.74
SYNE1-201ENST00000341594 GOLGA6L10A0A0M3HER8 536 aa4.15□□□□□ -1.74
SYNE1-201ENST00000341594 OTUD7AQ8TE49 926 aaPredicted RBP4.15□□□□□ -1.74
SYNE1-201ENST00000341594 SYCE3A1L190 88 aa4.15□□□□□ -1.74
SYNE1-201ENST00000341594 CHST3Q7LGC8 479 aa4.15□□□□□ -1.74
SYNE1-201ENST00000341594 RALGAPBQ86X10 1494 aa4.15□□□□□ -1.74
SYNE1-201ENST00000341594 KIF24Q5T7B8 1368 aa4.15□□□□□ -1.74
SYNE1-201ENST00000341594 C22orf23Q9BZE7 217 aa4.15□□□□□ -1.74
SYNE1-201ENST00000341594 CCT2P78371 535 aaKnown RBP4.15□□□□□ -1.74
SYNE1-201ENST00000341594 DZIP1Q86YF9 867 aaKnown RBP4.15□□□□□ -1.74
SYNE1-201ENST00000341594 ABCC2Q92887 1545 aa4.15□□□□□ -1.74
SYNE1-201ENST00000341594 UGGT2Q9NYU1 1516 aa4.15□□□□□ -1.74
SYNE1-201ENST00000341594 SPOCK2Q92563 424 aa4.15□□□□□ -1.74
SYNE1-201ENST00000341594 SBNO2Q9Y2G9 1366 aa4.15□□□□□ -1.74
SYNE1-201ENST00000341594 ZMYND10O75800 440 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 NEK4P51957 841 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 NUB1Q9Y5A7 615 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 MCM4P33991 863 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 SEPT14Q6ZU15 432 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 CHMP4BP1P59074 171 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 VPS53Q5VIR6 699 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 ADGRL2O95490 1459 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 SMC2O95347 1197 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 NKTRP30414 1462 aaKnown RBP4.15□□□□□ -1.75
SYNE1-201ENST00000341594 AKNAD1Q5T1N1 836 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 CNGA1P29973 690 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 DNAAF4Q8WXU2 420 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 SEMA3FQ13275 785 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 VPS37CA5D8V6 355 aaPredicted RBP4.15□□□□□ -1.75
SYNE1-201ENST00000341594 ZRANB2O95218 330 aaKnown RBP eCLIP4.15□□□□□ -1.75
SYNE1-201ENST00000341594 SPECC1Q5M775 1068 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 ANKRD18BA2A2Z9 1011 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 TRAK1Q9UPV9 953 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 RASSF8Q8NHQ8 419 aa4.15□□□□□ -1.75
SYNE1-201ENST00000341594 ANKRD36BQ8N2N9 1353 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms