RNA–Protein interactions for RNA: ENST00000339901.8

SECISBP2-201, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SECISBP2, Length 3,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-201ENST00000339901 ZSCAN23Q3MJ62 389 aa16.37■□□□□ 0.21
SECISBP2-201ENST00000339901 AKAP4Q5JQC9 854 aa16.37■□□□□ 0.21
SECISBP2-201ENST00000339901 USHBP1Q8N6Y0 703 aa16.37■□□□□ 0.21
SECISBP2-201ENST00000339901 LTV1Q96GA3 475 aaPredicted RBP16.37■□□□□ 0.21
SECISBP2-201ENST00000339901 ESPNB1AK53 854 aa16.37■□□□□ 0.21
SECISBP2-201ENST00000339901 HSPA4P34932 840 aa16.37■□□□□ 0.21
SECISBP2-201ENST00000339901 PLEKHG5O94827 1062 aa16.37■□□□□ 0.21
SECISBP2-201ENST00000339901 RILPL2Q969X0 211 aa16.37■□□□□ 0.21
SECISBP2-201ENST00000339901 TRIM6-TRIM34B2RNG4 842 aa16.36■□□□□ 0.21
SECISBP2-201ENST00000339901 NASPP49321 788 aaPredicted RBP16.36■□□□□ 0.21
SECISBP2-201ENST00000339901 MTX1Q13505 466 aa16.36■□□□□ 0.21
SECISBP2-201ENST00000339901 RHPN1Q8TCX5 695 aa16.36■□□□□ 0.21
SECISBP2-201ENST00000339901 GPT2Q8TD30 523 aa16.36■□□□□ 0.21
SECISBP2-201ENST00000339901 LGR6Q9HBX8 967 aa16.36■□□□□ 0.21
SECISBP2-201ENST00000339901 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.36■□□□□ 0.21
SECISBP2-201ENST00000339901 ADCY9O60503 1353 aa16.36■□□□□ 0.21
SECISBP2-201ENST00000339901 KIF1BPQ96EK5 621 aa16.36■□□□□ 0.21
SECISBP2-201ENST00000339901 ERBB4Q15303 1308 aa16.36■□□□□ 0.21
SECISBP2-201ENST00000339901 DNAAF4Q8WXU2 420 aa16.35■□□□□ 0.21
SECISBP2-201ENST00000339901 ANO2Q9NQ90 1003 aa16.35■□□□□ 0.21
SECISBP2-201ENST00000339901 TRPM3Q9HCF6 1732 aaPredicted RBP16.35■□□□□ 0.21
SECISBP2-201ENST00000339901 HSP90AB4PQ58FF6 505 aa16.34■□□□□ 0.21
SECISBP2-201ENST00000339901 CHPF2Q9P2E5 772 aa16.34■□□□□ 0.21
SECISBP2-201ENST00000339901 AMOTQ4VCS5 1084 aa16.34■□□□□ 0.21
SECISBP2-201ENST00000339901 CAVIN1Q6NZI2 390 aaKnown RBP16.34■□□□□ 0.21
SECISBP2-201ENST00000339901 IL25Q9H293 177 aa16.34■□□□□ 0.21
SECISBP2-201ENST00000339901 SURF6O75683 361 aaKnown RBP16.34■□□□□ 0.21
SECISBP2-201ENST00000339901 SGSM2O43147 1006 aa16.33■□□□□ 0.2
SECISBP2-201ENST00000339901 PRPF40AO75400 957 aaKnown RBP16.33■□□□□ 0.2
SECISBP2-201ENST00000339901 NBPF7P0C2Y1 421 aaPredicted RBP16.33■□□□□ 0.2
SECISBP2-201ENST00000339901 IL1RAPL2Q9NP60 686 aa16.33■□□□□ 0.2
SECISBP2-201ENST00000339901 RAD50Q92878 1312 aa16.33■□□□□ 0.2
SECISBP2-201ENST00000339901 MST1RQ04912 1400 aa16.33■□□□□ 0.2
SECISBP2-201ENST00000339901 TTC41PQ6P2S7 1318 aa16.33■□□□□ 0.2
SECISBP2-201ENST00000339901 SRGAP3O43295 1099 aa16.32■□□□□ 0.2
SECISBP2-201ENST00000339901 PLEKHO1Q53GL0 409 aaPredicted RBP16.32■□□□□ 0.2
SECISBP2-201ENST00000339901 TRIM44Q96DX7 344 aaPredicted RBP16.32■□□□□ 0.2
SECISBP2-201ENST00000339901 PXDNQ92626 1479 aa16.32■□□□□ 0.2
SECISBP2-201ENST00000339901 PI4KAP2A4QPH2 592 aa16.32■□□□□ 0.2
SECISBP2-201ENST00000339901 NUTM1Q86Y26 1132 aa16.32■□□□□ 0.2
SECISBP2-201ENST00000339901 PI4KAP1Q8N8J0 262 aa16.32■□□□□ 0.2
SECISBP2-201ENST00000339901 ANKLE2Q86XL3 938 aa16.32■□□□□ 0.2
SECISBP2-201ENST00000339901 SETD1BQ9UPS6 1966 aaKnown RBP16.32■□□□□ 0.2
SECISBP2-201ENST00000339901 ALDH1L1O75891 902 aa16.31■□□□□ 0.2
SECISBP2-201ENST00000339901 MBD3O95983 291 aa16.31■□□□□ 0.2
SECISBP2-201ENST00000339901 LSG1Q9H089 658 aaKnown RBP16.31■□□□□ 0.2
SECISBP2-201ENST00000339901 BTBD11A6QL63 1104 aa16.31■□□□□ 0.2
SECISBP2-201ENST00000339901 RNMTO43148 476 aaKnown RBP16.31■□□□□ 0.2
SECISBP2-201ENST00000339901 KCNQ3O43525 872 aa16.31■□□□□ 0.2
SECISBP2-201ENST00000339901 HS1BP3Q53T59 392 aa16.31■□□□□ 0.2
SECISBP2-201ENST00000339901 DBF4Q9UBU7 674 aaPredicted RBP16.31■□□□□ 0.2
SECISBP2-201ENST00000339901 EIF2S2P20042 333 aaKnown RBP16.3■□□□□ 0.2
SECISBP2-201ENST00000339901 ARHGEF25Q86VW2 580 aa16.3■□□□□ 0.2
SECISBP2-201ENST00000339901 CNTROBQ8N137 903 aa16.3■□□□□ 0.2
SECISBP2-201ENST00000339901 PDLIM2Q96JY6 352 aa16.3■□□□□ 0.2
SECISBP2-201ENST00000339901 TTC14Q96N46 770 aa16.3■□□□□ 0.2
SECISBP2-201ENST00000339901 PSME1Q06323 249 aa16.3■□□□□ 0.2
SECISBP2-201ENST00000339901 ZNF530Q6P9A1 599 aaPredicted RBP16.3■□□□□ 0.2
SECISBP2-201ENST00000339901 LRSAM1Q6UWE0 723 aa16.29■□□□□ 0.2
SECISBP2-201ENST00000339901 C14orf37Q86TY3 774 aa16.29■□□□□ 0.2
SECISBP2-201ENST00000339901 UTYO14607 1347 aa16.29■□□□□ 0.2
SECISBP2-201ENST00000339901 TEFQ10587 303 aa16.29■□□□□ 0.2
SECISBP2-201ENST00000339901 RBSNQ9H1K0 784 aa16.29■□□□□ 0.2
SECISBP2-201ENST00000339901 TMEM63CQ9P1W3 806 aa16.29■□□□□ 0.2
SECISBP2-201ENST00000339901 ANP32BQ92688 251 aaKnown RBP16.29■□□□□ 0.2
SECISBP2-201ENST00000339901 KIF1AQ12756 1690 aa16.28■□□□□ 0.2
SECISBP2-201ENST00000339901 GIGYF1O75420 1035 aaPredicted RBP16.28■□□□□ 0.2
SECISBP2-201ENST00000339901 PRIM1P49642 420 aaKnown RBP16.28■□□□□ 0.2
SECISBP2-201ENST00000339901 SNX14Q9Y5W7 946 aa16.28■□□□□ 0.2
SECISBP2-201ENST00000339901 KCNB2Q92953 911 aa16.28■□□□□ 0.2
SECISBP2-201ENST00000339901 GLRX3O76003 335 aaKnown RBP16.27■□□□□ 0.2
SECISBP2-201ENST00000339901 HDAC5Q9UQL6 1122 aa16.27■□□□□ 0.2
SECISBP2-201ENST00000339901 ABCC6O95255 1503 aa16.27■□□□□ 0.2
SECISBP2-201ENST00000339901 NCLP19338 710 aaKnown RBP16.27■□□□□ 0.2
SECISBP2-201ENST00000339901 ESCO1Q5FWF5 840 aa16.27■□□□□ 0.2
SECISBP2-201ENST00000339901 KSR2Q6VAB6 950 aa16.27■□□□□ 0.2
SECISBP2-201ENST00000339901 LRRC59Q96AG4 307 aaKnown RBP16.27■□□□□ 0.2
SECISBP2-201ENST00000339901 GCP02774 474 aa16.27■□□□□ 0.19
SECISBP2-201ENST00000339901 TMEM87AQ8NBN3 555 aa16.27■□□□□ 0.19
SECISBP2-201ENST00000339901 NSFL1CQ9UNZ2 370 aaKnown RBP16.27■□□□□ 0.19
SECISBP2-201ENST00000339901 SCN11AQ9UI33 1791 aa16.26■□□□□ 0.19
SECISBP2-201ENST00000339901 RPAP1Q9BWH6 1393 aaPredicted RBP16.26■□□□□ 0.19
SECISBP2-201ENST00000339901 UPF3BQ9BZI7 483 aaKnown RBP16.26■□□□□ 0.19
SECISBP2-201ENST00000339901 RBM27Q9P2N5 1060 aaKnown RBP16.26■□□□□ 0.19
SECISBP2-201ENST00000339901 WDR33Q9C0J8 1336 aaKnown RBP16.26■□□□□ 0.19
SECISBP2-201ENST00000339901 MPRIPQ6WCQ1 1025 aa16.26■□□□□ 0.19
SECISBP2-201ENST00000339901 ZSCAN30Q86W11 494 aa16.26■□□□□ 0.19
SECISBP2-201ENST00000339901 ERC1Q8IUD2 1116 aa16.26■□□□□ 0.19
SECISBP2-201ENST00000339901 ADAMTSL3P82987 1691 aa16.26■□□□□ 0.19
SECISBP2-201ENST00000339901 ALS2Q96Q42 1657 aa16.26■□□□□ 0.19
SECISBP2-201ENST00000339901 MRC1P22897 1456 aa16.26■□□□□ 0.19
SECISBP2-201ENST00000339901 RGPD5Q99666 1765 aa16.25■□□□□ 0.19
SECISBP2-201ENST00000339901 C1orf141Q5JVX7 400 aa16.25■□□□□ 0.19
SECISBP2-201ENST00000339901 CHAMP1Q96JM3 812 aa16.25■□□□□ 0.19
SECISBP2-201ENST00000339901 HYPKQ9NX55 129 aa16.25■□□□□ 0.19
SECISBP2-201ENST00000339901 MAP3K2Q9Y2U5 619 aa16.25■□□□□ 0.19
SECISBP2-201ENST00000339901 C5P01031 1676 aa16.24■□□□□ 0.19
SECISBP2-201ENST00000339901 MAP4K4O95819 1239 aaPredicted RBP16.24■□□□□ 0.19
SECISBP2-201ENST00000339901 SNRKQ9NRH2 765 aa16.24■□□□□ 0.19
SECISBP2-201ENST00000339901 KLHL34Q8N239 644 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms