RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 STRN4Q9NRL3 753 aa18.78■□□□□ 0.6
NPHP3-201ENST00000337331 GLRX3O76003 335 aaKnown RBP18.78■□□□□ 0.6
NPHP3-201ENST00000337331 SLU7O95391 586 aaKnown RBP18.78■□□□□ 0.6
NPHP3-201ENST00000337331 TTC39AQ5SRH9 613 aa18.78■□□□□ 0.6
NPHP3-201ENST00000337331 PDLIM2Q96JY6 352 aa18.78■□□□□ 0.6
NPHP3-201ENST00000337331 PPP6R1Q9UPN7 881 aa18.78■□□□□ 0.6
NPHP3-201ENST00000337331 TTC31Q49AM3 519 aaPredicted RBP18.78■□□□□ 0.6
NPHP3-201ENST00000337331 STK11IPQ8N1F8 1099 aa18.78■□□□□ 0.6
NPHP3-201ENST00000337331 NEK11Q8NG66 645 aa18.78■□□□□ 0.6
NPHP3-201ENST00000337331 CNPY2Q9Y2B0 182 aa18.78■□□□□ 0.6
NPHP3-201ENST00000337331 TERF2Q15554 542 aa18.77■□□□□ 0.6
NPHP3-201ENST00000337331 JMYQ8N9B5 988 aa18.77■□□□□ 0.6
NPHP3-201ENST00000337331 CCDC83Q8IWF9 413 aa18.77■□□□□ 0.6
NPHP3-201ENST00000337331 BANK1Q8NDB2 785 aa18.77■□□□□ 0.6
NPHP3-201ENST00000337331 DDX11Q96FC9 970 aa18.77■□□□□ 0.6
NPHP3-201ENST00000337331 FBLN1P23142 703 aa18.77■□□□□ 0.6
NPHP3-201ENST00000337331 RBM33Q96EV2 1170 aaKnown RBP18.77■□□□□ 0.6
NPHP3-201ENST00000337331 NAP1L1P55209 391 aaKnown RBP18.77■□□□□ 0.59
NPHP3-201ENST00000337331 CEP126Q9P2H0 1117 aa18.77■□□□□ 0.59
NPHP3-201ENST00000337331 BRPF1P55201 1214 aaPredicted RBP18.76■□□□□ 0.59
NPHP3-201ENST00000337331 FBXO31Q5XUX0 539 aaPredicted RBP18.76■□□□□ 0.59
NPHP3-201ENST00000337331 GIMAP7Q8NHV1 300 aa18.76■□□□□ 0.59
NPHP3-201ENST00000337331 ACBD3Q9H3P7 528 aa18.76■□□□□ 0.59
NPHP3-201ENST00000337331 PYCARDQ9ULZ3 195 aa18.76■□□□□ 0.59
NPHP3-201ENST00000337331 C14orf93Q9H972 538 aaKnown RBP18.76■□□□□ 0.59
NPHP3-201ENST00000337331 KIF6Q6ZMV9 814 aa18.76■□□□□ 0.59
NPHP3-201ENST00000337331 USP8P40818 1118 aa18.75■□□□□ 0.59
NPHP3-201ENST00000337331 ZC3H6P61129 1189 aaKnown RBP18.75■□□□□ 0.59
NPHP3-201ENST00000337331 GPATCH8Q9UKJ3 1502 aaKnown RBP18.75■□□□□ 0.59
NPHP3-201ENST00000337331 KIF2AO00139 706 aaPredicted RBP18.75■□□□□ 0.59
NPHP3-201ENST00000337331 SERPINC1P01008 464 aa18.75■□□□□ 0.59
NPHP3-201ENST00000337331 SKILP12757 684 aa18.75■□□□□ 0.59
NPHP3-201ENST00000337331 UBE2HP62256 183 aa18.75■□□□□ 0.59
NPHP3-201ENST00000337331 TAF7Q15545 349 aaPredicted RBP18.75■□□□□ 0.59
NPHP3-201ENST00000337331 ARHGAP29Q52LW3 1261 aa18.75■□□□□ 0.59
NPHP3-201ENST00000337331 PRPF40BQ6NWY9 871 aaKnown RBP18.75■□□□□ 0.59
NPHP3-201ENST00000337331 DNAAF4Q8WXU2 420 aa18.75■□□□□ 0.59
NPHP3-201ENST00000337331 CCDC57Q2TAC2 916 aa18.75■□□□□ 0.59
NPHP3-201ENST00000337331 THOC2Q8NI27 1593 aaKnown RBP18.75■□□□□ 0.59
NPHP3-201ENST00000337331 NOS1P29475 1434 aa18.75■□□□□ 0.59
NPHP3-201ENST00000337331 FAM83GA6ND36 823 aa18.74■□□□□ 0.59
NPHP3-201ENST00000337331 GADD45BO75293 160 aaPredicted RBP18.74■□□□□ 0.59
NPHP3-201ENST00000337331 HNRNPH2P55795 449 aaKnown RBP18.74■□□□□ 0.59
NPHP3-201ENST00000337331 CFAP45Q9UL16 551 aa18.74■□□□□ 0.59
NPHP3-201ENST00000337331 KRT32Q14532 448 aa18.74■□□□□ 0.59
NPHP3-201ENST00000337331 ZNF526Q8TF50 670 aaPredicted RBP18.74■□□□□ 0.59
NPHP3-201ENST00000337331 IBTKQ9P2D0 1353 aaPredicted RBP18.74■□□□□ 0.59
NPHP3-201ENST00000337331 ZNF165P49910 485 aa18.74■□□□□ 0.59
NPHP3-201ENST00000337331 ZNF710Q8N1W2 664 aa18.74■□□□□ 0.59
NPHP3-201ENST00000337331 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.74■□□□□ 0.591e-8■■■■■ 50
NPHP3-201ENST00000337331 BOLA2Q9H3K6 86 aa18.74■□□□□ 0.59
NPHP3-201ENST00000337331 SNW1Q13573 536 aaKnown RBP18.73■□□□□ 0.59
NPHP3-201ENST00000337331 TOM1L2Q6ZVM7 507 aa18.73■□□□□ 0.59
NPHP3-201ENST00000337331 SPG7Q9UQ90 795 aa18.73■□□□□ 0.59
NPHP3-201ENST00000337331 TDO2P48775 406 aa18.73■□□□□ 0.59
NPHP3-201ENST00000337331 CCDC85AQ96PX6 553 aaPredicted RBP18.73■□□□□ 0.59
NPHP3-201ENST00000337331 SECISBP2LQ93073 1101 aaKnown RBP18.73■□□□□ 0.59
NPHP3-201ENST00000337331 WASLO00401 505 aaPredicted RBP18.72■□□□□ 0.59
NPHP3-201ENST00000337331 BRD2P25440 801 aaKnown RBP18.72■□□□□ 0.59
NPHP3-201ENST00000337331 NAA30Q147X3 362 aaPredicted RBP18.72■□□□□ 0.59
NPHP3-201ENST00000337331 AXDND1Q5T1B0 1012 aaPredicted RBP18.72■□□□□ 0.59
NPHP3-201ENST00000337331 USHBP1Q8N6Y0 703 aa18.72■□□□□ 0.59
NPHP3-201ENST00000337331 SPATA31E1Q6ZUB1 1445 aa18.72■□□□□ 0.59
NPHP3-201ENST00000337331 FILIP1LQ4L180 1135 aa18.72■□□□□ 0.59
NPHP3-201ENST00000337331 KIF14Q15058 1648 aa18.72■□□□□ 0.59
NPHP3-201ENST00000337331 MYCBPQ99417 103 aaPredicted RBP18.72■□□□□ 0.59
NPHP3-201ENST00000337331 MBIPQ9NS73 344 aa18.72■□□□□ 0.59
NPHP3-201ENST00000337331 ZNF215Q9UL58 517 aaPredicted RBP18.72■□□□□ 0.59
NPHP3-201ENST00000337331 CAPN2P17655 700 aa18.72■□□□□ 0.59
NPHP3-201ENST00000337331 TRIM22Q8IYM9 498 aa18.72■□□□□ 0.59
NPHP3-201ENST00000337331 NSFL1CQ9UNZ2 370 aaKnown RBP18.72■□□□□ 0.59
NPHP3-201ENST00000337331 RAB11FIP3O75154 756 aa18.71■□□□□ 0.59
NPHP3-201ENST00000337331 EIF3JO75822 258 aaKnown RBP18.71■□□□□ 0.59
NPHP3-201ENST00000337331 LUZP1Q86V48 1076 aa18.71■□□□□ 0.59
NPHP3-201ENST00000337331 FAM200AQ8TCP9 573 aa18.71■□□□□ 0.59
NPHP3-201ENST00000337331 NUP160Q12769 1436 aa18.71■□□□□ 0.59
NPHP3-201ENST00000337331 UGGT2Q9NYU1 1516 aa18.71■□□□□ 0.59
NPHP3-201ENST00000337331 A0A1B0GUL7 405 aa18.71■□□□□ 0.59
NPHP3-201ENST00000337331 FLIIQ13045 1269 aa18.71■□□□□ 0.59
NPHP3-201ENST00000337331 SAMD1Q6SPF0 538 aaPredicted RBP18.71■□□□□ 0.59
NPHP3-201ENST00000337331 CEP57L1Q8IYX8 460 aa18.71■□□□□ 0.59
NPHP3-201ENST00000337331 ADGRL1O94910 1474 aa18.7■□□□□ 0.58
NPHP3-201ENST00000337331 LRMPQ12912 555 aa18.7■□□□□ 0.58
NPHP3-201ENST00000337331 TESK2Q96S53 571 aa18.7■□□□□ 0.58
NPHP3-201ENST00000337331 CENPHQ9H3R5 247 aa18.7■□□□□ 0.58
NPHP3-201ENST00000337331 CT47A1Q5JQC4 288 aaPredicted RBP18.7■□□□□ 0.58
NPHP3-201ENST00000337331 TSHZ3Q63HK5 1081 aa18.7■□□□□ 0.58
NPHP3-201ENST00000337331 RUFY1Q96T51 708 aa18.7■□□□□ 0.58
NPHP3-201ENST00000337331 ZSCAN26Q16670 478 aa18.7■□□□□ 0.58
NPHP3-201ENST00000337331 ERO1AQ96HE7 468 aa18.7■□□□□ 0.58
NPHP3-201ENST00000337331 TCEAL9Q9UHQ7 104 aa18.7■□□□□ 0.58
NPHP3-201ENST00000337331 CCDC171Q6TFL3 1326 aa18.69■□□□□ 0.58
NPHP3-201ENST00000337331 CD109Q6YHK3 1445 aa18.69■□□□□ 0.58
NPHP3-201ENST00000337331 PRDM11Q9NQV5 511 aa18.69■□□□□ 0.58
NPHP3-201ENST00000337331 SFPQP23246 707 aaKnown RBP eCLIP18.69■□□□□ 0.58
NPHP3-201ENST00000337331 CCDC8Q9H0W5 538 aaPredicted RBP18.69■□□□□ 0.58
NPHP3-201ENST00000337331 CTNNA3Q9UI47 895 aa18.69■□□□□ 0.58
NPHP3-201ENST00000337331 NACAP1Q9BZK3 213 aa18.68■□□□□ 0.58
NPHP3-201ENST00000337331 RALGAPBQ86X10 1494 aa18.68■□□□□ 0.58
NPHP3-201ENST00000337331 KIAA0556O60303 1618 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms