RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 RALYLQ86SE5 291 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 DDX49Q9Y6V7 483 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 BICRAQ9NZM4 1560 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 TROVE2P10155 538 aaKnown RBP eCLIP7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 TPD52L1Q16890 204 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 CCDC178Q5BJE1 867 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 KIF2CQ99661 725 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 MKRN1Q9UHC7 482 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 SMIM24O75264 130 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 SLC8A1P32418 973 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 ZMYND8Q9ULU4 1186 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 AAMPQ13685 434 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 IFT74Q96LB3 600 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 PLCB1Q9NQ66 1216 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 CEP162Q5TB80 1403 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 CASQ2O14958 399 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-201ENST00000334218 ZSCAN30Q86W11 494 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 FSD1Q9BTV5 496 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 TACC3Q9Y6A5 838 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 RFC1P35251 1148 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-201ENST00000334218 TCERG1LQ5VWI1 586 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 PIP4K2AP48426 406 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-201ENST00000334218 MSL1Q68DK7 614 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 WIZO95785 1651 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 HOOK3Q86VS8 718 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 TONSLQ96HA7 1378 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 HNRNPCL2B2RXH8 293 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 HNRNPCL1O60812 293 aaKnown RBP7□□□□□ -1.29
CDC42BPA-201ENST00000334218 ARHGAP25P42331 645 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 PCYT1AP49585 367 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 NBPF11Q86T75 865 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 MSANTD4Q8NCY6 345 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 NRDE2Q9H7Z3 1164 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 UTP6Q9NYH9 597 aaKnown RBP7□□□□□ -1.29
CDC42BPA-201ENST00000334218 SKOR1P84550 965 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 DEUP1Q05D60 604 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 GKAP1Q5VSY0 366 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-201ENST00000334218 TRIM5Q9C035 493 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 A0A0G2JS52 829 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 CTAGE5O15320 804 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 GBP1P32455 592 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 GCKP35557 465 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 DYNC1I2Q13409 638 aaKnown RBP7□□□□□ -1.29
CDC42BPA-201ENST00000334218 FBF1Q8TES7 1133 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 PAXBP1Q9Y5B6 917 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 OPA1O60313 960 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 NBPF9Q3BBW0 867 aa7□□□□□ -1.29
CDC42BPA-201ENST00000334218 BRPF1P55201 1214 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 PRR16Q569H4 304 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 PPP4R3BQ5MIZ7 849 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 CTAGE1Q96RT6 745 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 CNGA1P29973 690 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 CALCOCO2Q13137 446 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 TSHZ2Q9NRE2 1034 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 ODF2LQ9ULJ1 636 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 EIF3AQ14152 1382 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 MSL3P1P0C860 447 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 MRPL28Q13084 256 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 EID1Q9Y6B2 187 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 EBAG9O00559 213 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 FMNL1O95466 1100 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 CCDC47Q96A33 483 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 TRIM4Q9C037 500 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 DHX16O60231 1041 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 SPTY2D1Q68D10 685 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 CC2D2BQ6DHV5 1058 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 PODNQ7Z5L7 613 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 SMTNL1A8MU46 457 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 B4GALNT3Q6L9W6 998 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 UBE2Q1Q7Z7E8 422 aa6.99□□□□□ -1.29
CDC42BPA-201ENST00000334218 BAZ2BQ9UIF8 2168 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 CLNS1AP54105 237 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 COPG1Q9Y678 874 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 KIF5AQ12840 1032 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 MFSD4BQ5TF39 518 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 ARL10Q8N8L6 244 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 ATP11AP98196 1134 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 LETM2Q2VYF4 491 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 CCDC83Q8IWF9 413 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 BIN2Q9UBW5 565 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 NEMFO60524 1076 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 KDM4AO75164 1064 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 CLTAP09496 248 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 PARVBQ9HBI1 364 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 PALMDQ9NP74 551 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 CERS3Q8IU89 383 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 OLR1P78380 273 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 SATB1Q01826 763 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 UTP14CQ5TAP6 766 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 CCDC80Q76M96 950 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 MAP4K4O95819 1239 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 SERPINC1P01008 464 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 NBPF8Q3BBV2 869 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 UBXN4Q92575 508 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 ATP2A3Q93084 1043 aa6.98□□□□□ -1.29
CDC42BPA-201ENST00000334218 CCER2I3L3R5 266 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 MAN1A2O60476 641 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 CCDC96Q2M329 555 aa6.97□□□□□ -1.29
CDC42BPA-201ENST00000334218 LACTBP83111 547 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms