RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 DNAAF4Q8WXU2 420 aa17.05■□□□□ 0.32
ATP2C1-201ENST00000328560 CHMP4AQ9BY43 222 aa17.05■□□□□ 0.32
ATP2C1-201ENST00000328560 SYCE3A1L190 88 aa17.05■□□□□ 0.32
ATP2C1-201ENST00000328560 KCNH5Q8NCM2 988 aa17.05■□□□□ 0.32
ATP2C1-201ENST00000328560 SSH3Q8TE77 659 aa17.05■□□□□ 0.32
ATP2C1-201ENST00000328560 RGPD1P0DJD0 1748 aa17.05■□□□□ 0.32
ATP2C1-201ENST00000328560 EIF4A1P60842 406 aaKnown RBP17.05■□□□□ 0.32
ATP2C1-201ENST00000328560 CWC27Q6UX04 472 aaKnown RBP17.05■□□□□ 0.32
ATP2C1-201ENST00000328560 RGPD8O14715 1765 aaPredicted RBP17.04■□□□□ 0.32
ATP2C1-201ENST00000328560 RNF214Q8ND24 703 aa17.04■□□□□ 0.32
ATP2C1-201ENST00000328560 RBSNQ9H1K0 784 aa17.04■□□□□ 0.32
ATP2C1-201ENST00000328560 STAP2Q9UGK3 403 aa17.04■□□□□ 0.32
ATP2C1-201ENST00000328560 TOPAZ1Q8N9V7 1692 aa17.04■□□□□ 0.32
ATP2C1-201ENST00000328560 CCDC173Q0VFZ6 552 aa17.04■□□□□ 0.32
ATP2C1-201ENST00000328560 MCM2P49736 904 aa17.04■□□□□ 0.32
ATP2C1-201ENST00000328560 IP6K1Q92551 441 aa17.04■□□□□ 0.32
ATP2C1-201ENST00000328560 C9orf78Q9NZ63 289 aaPredicted RBP17.04■□□□□ 0.32
ATP2C1-201ENST00000328560 SPG7Q9UQ90 795 aa17.04■□□□□ 0.32
ATP2C1-201ENST00000328560 KIAA1211Q6ZU35 1233 aa17.03■□□□□ 0.32
ATP2C1-201ENST00000328560 ARHGAP23Q9P227 1491 aa17.03■□□□□ 0.32
ATP2C1-201ENST00000328560 SLIT1O75093 1534 aa17.03■□□□□ 0.32
ATP2C1-201ENST00000328560 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
ATP2C1-201ENST00000328560 ANKARQ7Z5J8 1434 aa17.02■□□□□ 0.32
ATP2C1-201ENST00000328560 AIMP1Q12904 312 aaKnown RBP17.02■□□□□ 0.32
ATP2C1-201ENST00000328560 KIF1BPQ96EK5 621 aa17.02■□□□□ 0.32
ATP2C1-201ENST00000328560 TMEM63CQ9P1W3 806 aa17.02■□□□□ 0.32
ATP2C1-201ENST00000328560 NALCNQ8IZF0 1738 aa17.02■□□□□ 0.31
ATP2C1-201ENST00000328560 RAB11FIP3O75154 756 aa17.01■□□□□ 0.31
ATP2C1-201ENST00000328560 ZNF445P59923 1031 aa17.01■□□□□ 0.31
ATP2C1-201ENST00000328560 DDX54Q8TDD1 881 aaKnown RBP17.01■□□□□ 0.31
ATP2C1-201ENST00000328560 PLEKHO1Q53GL0 409 aaPredicted RBP17.01■□□□□ 0.31
ATP2C1-201ENST00000328560 PA2G4Q9UQ80 394 aaKnown RBP17.01■□□□□ 0.31
ATP2C1-201ENST00000328560 CPA1P15085 419 aa17.01■□□□□ 0.31
ATP2C1-201ENST00000328560 PIK3C2AO00443 1686 aa17■□□□□ 0.31
ATP2C1-201ENST00000328560 ANAPC15P60006 121 aa17■□□□□ 0.31
ATP2C1-201ENST00000328560 BEND3Q5T5X7 828 aa17■□□□□ 0.31
ATP2C1-201ENST00000328560 CNTROBQ8N137 903 aa17■□□□□ 0.31
ATP2C1-201ENST00000328560 PRAMEF22A3QJZ6 481 aa17■□□□□ 0.31
ATP2C1-201ENST00000328560 PROSER2Q86WR7 435 aaPredicted RBP17■□□□□ 0.31
ATP2C1-201ENST00000328560 MAP3K2Q9Y2U5 619 aa17■□□□□ 0.31
ATP2C1-201ENST00000328560 CWF19L2Q2TBE0 894 aaKnown RBP17■□□□□ 0.31
ATP2C1-201ENST00000328560 PROSER3Q2NL68 480 aa16.99■□□□□ 0.31
ATP2C1-201ENST00000328560 PI4K2BQ8TCG2 481 aa16.99■□□□□ 0.31
ATP2C1-201ENST00000328560 DIAPH3Q9NSV4 1193 aa16.99■□□□□ 0.31
ATP2C1-201ENST00000328560 BABAM1Q9NWV8 329 aa16.99■□□□□ 0.31
ATP2C1-201ENST00000328560 BRD1O95696 1058 aa16.99■□□□□ 0.31
ATP2C1-201ENST00000328560 MSNP26038 577 aaKnown RBP16.99■□□□□ 0.31
ATP2C1-201ENST00000328560 CUL4AQ13619 759 aa16.98■□□□□ 0.31
ATP2C1-201ENST00000328560 POLA2Q14181 598 aa16.98■□□□□ 0.31
ATP2C1-201ENST00000328560 CLASRPQ8N2M8 674 aaKnown RBP16.98■□□□□ 0.31
ATP2C1-201ENST00000328560 ORAI2Q96SN7 254 aa16.98■□□□□ 0.31
ATP2C1-201ENST00000328560 FMN2Q9NZ56 1722 aa16.97■□□□□ 0.31
ATP2C1-201ENST00000328560 SGSM2O43147 1006 aa16.97■□□□□ 0.31
ATP2C1-201ENST00000328560 HSPA4P34932 840 aa16.97■□□□□ 0.31
ATP2C1-201ENST00000328560 RASEFQ8IZ41 740 aa16.97■□□□□ 0.31
ATP2C1-201ENST00000328560 IFIT2P09913 472 aaKnown RBP16.97■□□□□ 0.31
ATP2C1-201ENST00000328560 PPP1R9BQ96SB3 815 aa16.97■□□□□ 0.31
ATP2C1-201ENST00000328560 DBF4Q9UBU7 674 aaPredicted RBP16.97■□□□□ 0.31
ATP2C1-201ENST00000328560 AKAP4Q5JQC9 854 aa16.96■□□□□ 0.31
ATP2C1-201ENST00000328560 SNX14Q9Y5W7 946 aa16.96■□□□□ 0.31
ATP2C1-201ENST00000328560 GCP02774 474 aa16.96■□□□□ 0.31
ATP2C1-201ENST00000328560 KCNJ4P48050 445 aa16.96■□□□□ 0.31
ATP2C1-201ENST00000328560 HSP90AB4PQ58FF6 505 aa16.96■□□□□ 0.31
ATP2C1-201ENST00000328560 SIL1Q9H173 461 aa16.96■□□□□ 0.31
ATP2C1-201ENST00000328560 GADD45BO75293 160 aaPredicted RBP16.95■□□□□ 0.3
ATP2C1-201ENST00000328560 MBD3O95983 291 aa16.95■□□□□ 0.3
ATP2C1-201ENST00000328560 CASTP20810 708 aaKnown RBP16.95■□□□□ 0.3
ATP2C1-201ENST00000328560 ZSCAN30Q86W11 494 aa16.95■□□□□ 0.3
ATP2C1-201ENST00000328560 UBE2Q2Q8WVN8 375 aa16.95■□□□□ 0.3
ATP2C1-201ENST00000328560 INTS4Q96HW7 963 aaKnown RBP16.95■□□□□ 0.3
ATP2C1-201ENST00000328560 RNMTO43148 476 aaKnown RBP16.95■□□□□ 0.3
ATP2C1-201ENST00000328560 AK2P54819 239 aa16.95■□□□□ 0.3
ATP2C1-201ENST00000328560 AACSQ86V21 672 aa16.95■□□□□ 0.3
ATP2C1-201ENST00000328560 LRSAM1Q6UWE0 723 aa16.94■□□□□ 0.3
ATP2C1-201ENST00000328560 AOX1Q06278 1338 aa16.94■□□□□ 0.3
ATP2C1-201ENST00000328560 GLRX3O76003 335 aaKnown RBP16.94■□□□□ 0.3
ATP2C1-201ENST00000328560 AMOTQ4VCS5 1084 aa16.94■□□□□ 0.3
ATP2C1-201ENST00000328560 ANKRD24Q8TF21 1146 aa16.94■□□□□ 0.3
ATP2C1-201ENST00000328560 RAD50Q92878 1312 aa16.94■□□□□ 0.3
ATP2C1-201ENST00000328560 NWD1Q149M9 1564 aa16.94■□□□□ 0.3
ATP2C1-201ENST00000328560 FER1L4A9Z1Z3 1794 aa16.94■□□□□ 0.3
ATP2C1-201ENST00000328560 ZC3H6P61129 1189 aaKnown RBP16.94■□□□□ 0.3
ATP2C1-201ENST00000328560 PRPF40BQ6NWY9 871 aaKnown RBP16.94■□□□□ 0.3
ATP2C1-201ENST00000328560 MPNDQ8N594 471 aa16.94■□□□□ 0.3
ATP2C1-201ENST00000328560 CEMIPQ8WUJ3 1361 aa16.94■□□□□ 0.3
ATP2C1-201ENST00000328560 WDR33Q9C0J8 1336 aaKnown RBP16.93■□□□□ 0.3
ATP2C1-201ENST00000328560 SLC39A6Q13433 755 aa16.93■□□□□ 0.3
ATP2C1-201ENST00000328560 USP48Q86UV5 1035 aa16.93■□□□□ 0.3
ATP2C1-201ENST00000328560 LSG1Q9H089 658 aaKnown RBP16.93■□□□□ 0.3
ATP2C1-201ENST00000328560 CCDC8Q9H0W5 538 aaPredicted RBP16.93■□□□□ 0.3
ATP2C1-201ENST00000328560 ADCY9O60503 1353 aa16.93■□□□□ 0.3
ATP2C1-201ENST00000328560 CSB-PGBD3P0DP91 1061 aa16.93■□□□□ 0.3
ATP2C1-201ENST00000328560 MYL6BP14649 208 aa16.93■□□□□ 0.3
ATP2C1-201ENST00000328560 JAKMIP1Q96N16 626 aaKnown RBP16.93■□□□□ 0.3
ATP2C1-201ENST00000328560 SMC3Q9UQE7 1217 aa16.93■□□□□ 0.3
ATP2C1-201ENST00000328560 PTH1RQ03431 593 aa16.92■□□□□ 0.3
ATP2C1-201ENST00000328560 JARID2Q92833 1246 aaPredicted RBP16.92■□□□□ 0.3
ATP2C1-201ENST00000328560 KRT28Q7Z3Y7 464 aa16.92■□□□□ 0.3
ATP2C1-201ENST00000328560 ECHDC1Q9NTX5 307 aa16.92■□□□□ 0.3
ATP2C1-201ENST00000328560 GIGYF1O75420 1035 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms