RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 USP26Q9BXU7 913 aa13.02□□□□□ -0.32
CUL4A-201ENST00000326335 RGS12O14924 1447 aa13.02□□□□□ -0.32
CUL4A-201ENST00000326335 TATP17735 454 aaPredicted RBP13.02□□□□□ -0.33
CUL4A-201ENST00000326335 EVA1CP58658 441 aa13.02□□□□□ -0.33
CUL4A-201ENST00000326335 ATP8B2P98198 1209 aa13.02□□□□□ -0.33
CUL4A-201ENST00000326335 AACSQ86V21 672 aa13.02□□□□□ -0.33
CUL4A-201ENST00000326335 BOLA2Q9H3K6 86 aa13.02□□□□□ -0.33
CUL4A-201ENST00000326335 C19orf44Q9H6X5 657 aa13.02□□□□□ -0.33
CUL4A-201ENST00000326335 ATP10DQ9P241 1426 aa13.02□□□□□ -0.33
CUL4A-201ENST00000326335 AKAP4Q5JQC9 854 aa13.02□□□□□ -0.33
CUL4A-201ENST00000326335 ZBTB3Q9H5J0 574 aa13.02□□□□□ -0.33
CUL4A-201ENST00000326335 CHGBP05060 677 aa13.01□□□□□ -0.33
CUL4A-201ENST00000326335 MPNDQ8N594 471 aa13.01□□□□□ -0.33
CUL4A-201ENST00000326335 RHPN1Q8TCX5 695 aa13.01□□□□□ -0.33
CUL4A-201ENST00000326335 DDX49Q9Y6V7 483 aaKnown RBP13.01□□□□□ -0.33
CUL4A-201ENST00000326335 FER1L4A9Z1Z3 1794 aa13.01□□□□□ -0.33
CUL4A-201ENST00000326335 IFIT2P09913 472 aaKnown RBP13.01□□□□□ -0.33
CUL4A-201ENST00000326335 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.01□□□□□ -0.33
CUL4A-201ENST00000326335 TMEM94Q12767 1356 aa13.01□□□□□ -0.33
CUL4A-201ENST00000326335 RBM25P49756 843 aaKnown RBP13.01□□□□□ -0.33
CUL4A-201ENST00000326335 UBE3BQ7Z3V4 1068 aa13.01□□□□□ -0.33
CUL4A-201ENST00000326335 NAP1L2Q9ULW6 460 aaPredicted RBP13.01□□□□□ -0.33
CUL4A-201ENST00000326335 KIAA0232Q92628 1395 aa13.01□□□□□ -0.33
CUL4A-201ENST00000326335 REC8O95072 547 aa13□□□□□ -0.33
CUL4A-201ENST00000326335 FOSBP53539 338 aa13□□□□□ -0.33
CUL4A-201ENST00000326335 CABP4P57796 275 aa13□□□□□ -0.33
CUL4A-201ENST00000326335 DBF4Q9UBU7 674 aaPredicted RBP13□□□□□ -0.33
CUL4A-201ENST00000326335 SSH2Q76I76 1423 aa13□□□□□ -0.33
CUL4A-201ENST00000326335 GOLGA6L3A6NEY3 463 aa13□□□□□ -0.33
CUL4A-201ENST00000326335 ST18O60284 1047 aa13□□□□□ -0.33
CUL4A-201ENST00000326335 GIGYF1O75420 1035 aaPredicted RBP12.99□□□□□ -0.33
CUL4A-201ENST00000326335 BICC1Q9H694 974 aaKnown RBP12.99□□□□□ -0.33
CUL4A-201ENST00000326335 DNAJC2Q99543 621 aaKnown RBP12.99□□□□□ -0.33
CUL4A-201ENST00000326335 TLR7Q9NYK1 1049 aaKnown RBP12.99□□□□□ -0.33
CUL4A-201ENST00000326335 PRPF40AO75400 957 aaKnown RBP12.99□□□□□ -0.33
CUL4A-201ENST00000326335 NEUROD6Q96NK8 337 aa12.99□□□□□ -0.33
CUL4A-201ENST00000326335 SLFNL1Q499Z3 407 aa12.98□□□□□ -0.33
CUL4A-201ENST00000326335 KIAA1211Q6ZU35 1233 aa12.98□□□□□ -0.33
CUL4A-201ENST00000326335 KDRP35968 1356 aa12.98□□□□□ -0.33
CUL4A-201ENST00000326335 SUCLG2Q96I99 432 aa12.98□□□□□ -0.33
CUL4A-201ENST00000326335 DIAPH3Q9NSV4 1193 aa12.98□□□□□ -0.33
CUL4A-201ENST00000326335 RBM27Q9P2N5 1060 aaKnown RBP12.98□□□□□ -0.33
CUL4A-201ENST00000326335 NPHP4O75161 1426 aaPredicted RBP12.98□□□□□ -0.33
CUL4A-201ENST00000326335 BEND3Q5T5X7 828 aa12.98□□□□□ -0.33
CUL4A-201ENST00000326335 CAVIN1Q6NZI2 390 aaKnown RBP12.98□□□□□ -0.33
CUL4A-201ENST00000326335 ZNF790Q6PG37 636 aa12.98□□□□□ -0.33
CUL4A-201ENST00000326335 MON2Q7Z3U7 1717 aa12.98□□□□□ -0.33
CUL4A-201ENST00000326335 CLASRPQ8N2M8 674 aaKnown RBP12.98□□□□□ -0.33
CUL4A-201ENST00000326335 A1BGP04217 495 aa12.97□□□□□ -0.33
CUL4A-201ENST00000326335 PXDNQ92626 1479 aa12.97□□□□□ -0.33
CUL4A-201ENST00000326335 G3BP1Q13283 466 aaKnown RBP eCLIP12.97□□□□□ -0.33
CUL4A-201ENST00000326335 GBP4Q96PP9 640 aa12.97□□□□□ -0.33
CUL4A-201ENST00000326335 ESYT1Q9BSJ8 1104 aa12.97□□□□□ -0.33
CUL4A-201ENST00000326335 NEXNQ0ZGT2 675 aa12.97□□□□□ -0.33
CUL4A-201ENST00000326335 CHMLP26374 656 aa12.96□□□□□ -0.33
CUL4A-201ENST00000326335 ERBB3P21860 1342 aa12.96□□□□□ -0.33
CUL4A-201ENST00000326335 STK3Q13188 491 aa12.96□□□□□ -0.33
CUL4A-201ENST00000326335 RABEP1Q15276 862 aa12.96□□□□□ -0.33
CUL4A-201ENST00000326335 ANO8Q9HCE9 1232 aaPredicted RBP12.96□□□□□ -0.33
CUL4A-201ENST00000326335 PIK3C2AO00443 1686 aa12.95□□□□□ -0.34
CUL4A-201ENST00000326335 ZNF335Q9H4Z2 1342 aaPredicted RBP12.95□□□□□ -0.34
CUL4A-201ENST00000326335 CYP27B1O15528 508 aa12.95□□□□□ -0.34
CUL4A-201ENST00000326335 KDM4AO75164 1064 aa12.95□□□□□ -0.34
CUL4A-201ENST00000326335 AMOTQ4VCS5 1084 aa12.95□□□□□ -0.34
CUL4A-201ENST00000326335 EPHA10Q5JZY3 1008 aa12.95□□□□□ -0.34
CUL4A-201ENST00000326335 RNF214Q8ND24 703 aa12.95□□□□□ -0.34
CUL4A-201ENST00000326335 PRPF40BQ6NWY9 871 aaKnown RBP12.95□□□□□ -0.34
CUL4A-201ENST00000326335 A0A087WZG4 1122 aa12.95□□□□□ -0.34
CUL4A-201ENST00000326335 GOLGA6L22H0YM25 854 aa12.95□□□□□ -0.34
CUL4A-201ENST00000326335 ADAMTS2O95450 1211 aa12.95□□□□□ -0.34
CUL4A-201ENST00000326335 MCCP23508 829 aa12.95□□□□□ -0.34
CUL4A-201ENST00000326335 GPTP24298 496 aa12.94□□□□□ -0.34
CUL4A-201ENST00000326335 PLCB2Q00722 1185 aa12.94□□□□□ -0.34
CUL4A-201ENST00000326335 FAM227BQ96M60 508 aa12.94□□□□□ -0.34
CUL4A-201ENST00000326335 KNDC1Q76NI1 1749 aa12.94□□□□□ -0.34
CUL4A-201ENST00000326335 KIF1BPQ96EK5 621 aa12.94□□□□□ -0.34
CUL4A-201ENST00000326335 ZNF594Q96JF6 807 aaPredicted RBP12.94□□□□□ -0.34
CUL4A-201ENST00000326335 FSD1Q9BTV5 496 aa12.94□□□□□ -0.34
CUL4A-201ENST00000326335 AKAP12Q02952 1782 aa12.93□□□□□ -0.34
CUL4A-201ENST00000326335 NUTM2BA6NNL0 878 aaPredicted RBP12.93□□□□□ -0.34
CUL4A-201ENST00000326335 NUTM2EB1AL46 878 aaPredicted RBP12.93□□□□□ -0.34
CUL4A-201ENST00000326335 HTATSF1O43719 755 aaKnown RBP12.93□□□□□ -0.34
CUL4A-201ENST00000326335 DDX58O95786 925 aaKnown RBP12.93□□□□□ -0.34
CUL4A-201ENST00000326335 HSP90AB3PQ58FF7 597 aa12.93□□□□□ -0.34
CUL4A-201ENST00000326335 KSR2Q6VAB6 950 aa12.93□□□□□ -0.34
CUL4A-201ENST00000326335 NUTM2AQ8IVF1 878 aaPredicted RBP12.93□□□□□ -0.34
CUL4A-201ENST00000326335 TMX3Q96JJ7 454 aa12.93□□□□□ -0.34
CUL4A-201ENST00000326335 GRM8O00222 908 aa12.93□□□□□ -0.34
CUL4A-201ENST00000326335 XRCC6P12956 609 aaKnown RBP eCLIP12.93□□□□□ -0.34
CUL4A-201ENST00000326335 ARHGAP23Q9P227 1491 aa12.93□□□□□ -0.34
CUL4A-201ENST00000326335 TTLL7Q6ZT98 887 aa12.93□□□□□ -0.34
CUL4A-201ENST00000326335 CASTP20810 708 aaKnown RBP12.92□□□□□ -0.34
CUL4A-201ENST00000326335 COL9A3Q14050 684 aaPredicted RBP12.92□□□□□ -0.34
CUL4A-201ENST00000326335 ANKRD13DQ6ZTN6 518 aa12.92□□□□□ -0.34
CUL4A-201ENST00000326335 RASEFQ8IZ41 740 aa12.92□□□□□ -0.34
CUL4A-201ENST00000326335 IFNL2Q8IZJ0 200 aa12.92□□□□□ -0.34
CUL4A-201ENST00000326335 NECAB1Q8N987 351 aa12.92□□□□□ -0.34
CUL4A-201ENST00000326335 SNRKQ9NRH2 765 aa12.92□□□□□ -0.34
CUL4A-201ENST00000326335 ADCY9O60503 1353 aa12.92□□□□□ -0.34
CUL4A-201ENST00000326335 LARP1Q6PKG0 1096 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms