RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 LINC00116Q8NCU8 138 aa27.15■■□□□ 1.94
YBX1-201ENST00000321358 TNS1Q9HBL0 1735 aaKnown RBP27.15■■□□□ 1.94
YBX1-201ENST00000321358 DBF4Q9UBU7 674 aaPredicted RBP27.15■■□□□ 1.94
YBX1-201ENST00000321358 ERBB4Q15303 1308 aa27.14■■□□□ 1.94
YBX1-201ENST00000321358 CENPBP07199 599 aaPredicted RBP27.14■■□□□ 1.94
YBX1-201ENST00000321358 CRKLP46109 303 aaKnown RBP27.14■■□□□ 1.94
YBX1-201ENST00000321358 CCDC87Q9NVE4 849 aa27.14■■□□□ 1.94
YBX1-201ENST00000321358 RC3H1Q5TC82 1133 aaKnown RBP27.13■■□□□ 1.93
YBX1-201ENST00000321358 A1BGP04217 495 aa27.12■■□□□ 1.93
YBX1-201ENST00000321358 ALDH1L2Q3SY69 923 aa27.12■■□□□ 1.93
YBX1-201ENST00000321358 AK7Q96M32 723 aa27.12■■□□□ 1.93
YBX1-201ENST00000321358 CNTNAP4Q9C0A0 1308 aa27.11■■□□□ 1.93
YBX1-201ENST00000321358 TCERG1O14776 1098 aaKnown RBP27.11■■□□□ 1.93
YBX1-201ENST00000321358 CANXP27824 592 aaKnown RBP27.11■■□□□ 1.93
YBX1-201ENST00000321358 DDX21Q9NR30 783 aaKnown RBP eCLIP27.11■■□□□ 1.93
YBX1-201ENST00000321358 SMC4Q9NTJ3 1288 aa27.11■■□□□ 1.93
YBX1-201ENST00000321358 CHPF2Q9P2E5 772 aa27.11■■□□□ 1.93
YBX1-201ENST00000321358 RCAN3Q9UKA8 241 aa27.11■■□□□ 1.93
YBX1-201ENST00000321358 SLC4A2P04920 1241 aa27.1■■□□□ 1.93
YBX1-201ENST00000321358 RARSP54136 660 aaKnown RBP27.1■■□□□ 1.93
YBX1-201ENST00000321358 HYPKQ9NX55 129 aa27.1■■□□□ 1.93
YBX1-201ENST00000321358 MYL6BP14649 208 aa27.09■■□□□ 1.93
YBX1-201ENST00000321358 INTS5Q6P9B9 1019 aaKnown RBP27.09■■□□□ 1.93
YBX1-201ENST00000321358 LY75O60449 1722 aa27.09■■□□□ 1.93
YBX1-201ENST00000321358 SSH1Q8WYL5 1049 aa27.08■■□□□ 1.93
YBX1-201ENST00000321358 ZBTB1Q9Y2K1 713 aa27.08■■□□□ 1.93
YBX1-201ENST00000321358 ZNF330Q9Y3S2 320 aaPredicted RBP27.08■■□□□ 1.93
YBX1-201ENST00000321358 ZNF831Q5JPB2 1677 aa27.08■■□□□ 1.93
YBX1-201ENST00000321358 GNPATO15228 680 aa27.07■■□□□ 1.92
YBX1-201ENST00000321358 RTCBQ9Y3I0 505 aaKnown RBP27.07■■□□□ 1.92
YBX1-201ENST00000321358 IL6STP40189 918 aaPredicted RBP27.06■■□□□ 1.92
YBX1-201ENST00000321358 NBPF14Q5TI25 921 aa27.06■■□□□ 1.92
YBX1-201ENST00000321358 BCL2L13Q9BXK5 485 aa27.06■■□□□ 1.92
YBX1-201ENST00000321358 PIP4K2AP48426 406 aaPredicted RBP27.06■■□□□ 1.92
YBX1-201ENST00000321358 STK32BQ9NY57 414 aa27.06■■□□□ 1.92
YBX1-201ENST00000321358 RGPD3A6NKT7 1758 aaPredicted RBP27.06■■□□□ 1.92
YBX1-201ENST00000321358 RGPD4Q7Z3J3 1758 aa27.06■■□□□ 1.92
YBX1-201ENST00000321358 NBPF26B4DH59 902 aa27.05■■□□□ 1.92
YBX1-201ENST00000321358 RPS6KA4O75676 772 aa27.05■■□□□ 1.92
YBX1-201ENST00000321358 PDIA6Q15084 440 aa27.05■■□□□ 1.92
YBX1-201ENST00000321358 NBPF10Q6P3W6 841 aaKnown RBP27.05■■□□□ 1.92
YBX1-201ENST00000321358 NBPF15Q8N660 670 aa27.05■■□□□ 1.92
YBX1-201ENST00000321358 TFCP2L1Q9NZI6 479 aa27.05■■□□□ 1.92
YBX1-201ENST00000321358 ANXA1P04083 346 aa27.04■■□□□ 1.92
YBX1-201ENST00000321358 ARXQ96QS3 562 aa27.04■■□□□ 1.92
YBX1-201ENST00000321358 PROSER3Q2NL68 480 aa27.03■■□□□ 1.92
YBX1-201ENST00000321358 TJP1Q07157 1748 aa27.02■■□□□ 1.92
YBX1-201ENST00000321358 C5P01031 1676 aa27.02■■□□□ 1.92
YBX1-201ENST00000321358 A0A087WZG4 1122 aa27.02■■□□□ 1.92
YBX1-201ENST00000321358 MRPL50Q8N5N7 158 aaKnown RBP27.02■■□□□ 1.92
YBX1-201ENST00000321358 CICQ96RK0 1608 aaPredicted RBP27.02■■□□□ 1.92
YBX1-201ENST00000321358 KIF16BQ96L93 1317 aa27.01■■□□□ 1.91
YBX1-201ENST00000321358 BCAR3O75815 825 aa27■■□□□ 1.91
YBX1-201ENST00000321358 DDX58O95786 925 aaKnown RBP27■■□□□ 1.91
YBX1-201ENST00000321358 EIF5P55010 431 aaKnown RBP27■■□□□ 1.91
YBX1-201ENST00000321358 AIMP1Q12904 312 aaKnown RBP27■■□□□ 1.91
YBX1-201ENST00000321358 TRAPPC3LQ5T215 181 aa27■■□□□ 1.91
YBX1-201ENST00000321358 AKT1S1Q96B36 256 aa27■■□□□ 1.91
YBX1-201ENST00000321358 IPO8O15397 1037 aaKnown RBP27■■□□□ 1.91
YBX1-201ENST00000321358 BRPF1P55201 1214 aaPredicted RBP27■■□□□ 1.91
YBX1-201ENST00000321358 COPS6Q7L5N1 327 aa27■■□□□ 1.91
YBX1-201ENST00000321358 LAMB4A4D0S4 1761 aa26.99■■□□□ 1.91
YBX1-201ENST00000321358 ADRA2BP18089 450 aa26.99■■□□□ 1.91
YBX1-201ENST00000321358 SSFA2P28290 1259 aa26.99■■□□□ 1.91
YBX1-201ENST00000321358 FLIIQ13045 1269 aa26.99■■□□□ 1.91
YBX1-201ENST00000321358 SLC15A2Q16348 729 aa26.99■■□□□ 1.91
YBX1-201ENST00000321358 FLAD1Q8NFF5 587 aa26.99■■□□□ 1.91
YBX1-201ENST00000321358 XAGE3Q8WTP9 111 aa26.99■■□□□ 1.91
YBX1-201ENST00000321358 PHF14O94880 888 aa26.98■■□□□ 1.91
YBX1-201ENST00000321358 ZNF827Q17R98 1081 aa26.98■■□□□ 1.91
YBX1-201ENST00000321358 KIF6Q6ZMV9 814 aa26.98■■□□□ 1.91
YBX1-201ENST00000321358 FRAT1Q92837 279 aaPredicted RBP26.98■■□□□ 1.91
YBX1-201ENST00000321358 PHAXQ9H814 394 aaKnown RBP26.98■■□□□ 1.91
YBX1-201ENST00000321358 FKBP5Q13451 457 aaPredicted RBP26.97■■□□□ 1.91
YBX1-201ENST00000321358 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.97■■□□□ 1.91
YBX1-201ENST00000321358 C4BP0C0L5 1744 aa26.97■■□□□ 1.91
YBX1-201ENST00000321358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.96■■□□□ 1.91
YBX1-201ENST00000321358 NOB1Q9ULX3 412 aaKnown RBP26.96■■□□□ 1.91
YBX1-201ENST00000321358 PTPRCP08575 1304 aa26.96■■□□□ 1.91
YBX1-201ENST00000321358 COL15A1P39059 1388 aa26.96■■□□□ 1.91
YBX1-201ENST00000321358 RFC4P35249 363 aa26.95■■□□□ 1.91
YBX1-201ENST00000321358 G2E3Q7L622 706 aa26.95■■□□□ 1.91
YBX1-201ENST00000321358 LRP10Q7Z4F1 713 aa26.95■■□□□ 1.91
YBX1-201ENST00000321358 DZIP3Q86Y13 1208 aaKnown RBP26.95■■□□□ 1.91
YBX1-201ENST00000321358 ANKRD13DQ6ZTN6 518 aa26.95■■□□□ 1.9
YBX1-201ENST00000321358 ANO8Q9HCE9 1232 aaPredicted RBP26.95■■□□□ 1.9
YBX1-201ENST00000321358 COL5A3P25940 1745 aaPredicted RBP26.94■■□□□ 1.9
YBX1-201ENST00000321358 MSH5O43196 834 aa26.94■■□□□ 1.9
YBX1-201ENST00000321358 ZPR1O75312 459 aa26.94■■□□□ 1.9
YBX1-201ENST00000321358 ARHGEF1Q92888 912 aaKnown RBP26.94■■□□□ 1.9
YBX1-201ENST00000321358 TBC1D2BQ9UPU7 963 aa26.94■■□□□ 1.9
YBX1-201ENST00000321358 RIC3Q7Z5B4 369 aa26.93■■□□□ 1.9
YBX1-201ENST00000321358 ZKSCAN2Q63HK3 967 aa26.92■■□□□ 1.9
YBX1-201ENST00000321358 TTLL7Q6ZT98 887 aa26.92■■□□□ 1.9
YBX1-201ENST00000321358 ARHGAP45Q92619 1136 aa26.92■■□□□ 1.9
YBX1-201ENST00000321358 API5Q9BZZ5 524 aaKnown RBP26.92■■□□□ 1.9
YBX1-201ENST00000321358 SRCAPQ6ZRS2 3230 aa26.92■■□□□ 1.9
YBX1-201ENST00000321358 TAF1LQ8IZX4 1826 aa26.92■■□□□ 1.9
YBX1-201ENST00000321358 KSR2Q6VAB6 950 aa26.9■■□□□ 1.9
YBX1-201ENST00000321358 SMIM5Q71RC9 77 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms