RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.24
CASP3-201ENST00000308394 ADAMTS7Q9UKP4 1686 aa13.58□□□□□ -0.24
CASP3-201ENST00000308394 MVPQ14764 893 aaKnown RBP13.57□□□□□ -0.24
CASP3-201ENST00000308394 CDCA7Q9BWT1 371 aaPredicted RBP13.57□□□□□ -0.24
CASP3-201ENST00000308394 DISP2A7MBM2 1401 aa13.57□□□□□ -0.24
CASP3-201ENST00000308394 NRAPQ86VF7 1730 aa13.57□□□□□ -0.24
CASP3-201ENST00000308394 ERVV-2B6SEH9 535 aa13.57□□□□□ -0.24
CASP3-201ENST00000308394 TMEM57Q8N5G2 664 aa13.57□□□□□ -0.24
CASP3-201ENST00000308394 USP21Q9UK80 565 aa13.57□□□□□ -0.24
CASP3-201ENST00000308394 LRP6O75581 1613 aa13.57□□□□□ -0.24
CASP3-201ENST00000308394 DDB1Q16531 1140 aa13.57□□□□□ -0.24
CASP3-201ENST00000308394 FNBP4Q8N3X1 1017 aaPredicted RBP13.57□□□□□ -0.24
CASP3-201ENST00000308394 API5Q9BZZ5 524 aaKnown RBP13.57□□□□□ -0.24
CASP3-201ENST00000308394 KDM3BQ7LBC6 1761 aa13.56□□□□□ -0.24
CASP3-201ENST00000308394 NWD2Q9ULI1 1742 aa13.56□□□□□ -0.24
CASP3-201ENST00000308394 GIGYF1O75420 1035 aaPredicted RBP13.56□□□□□ -0.24
CASP3-201ENST00000308394 HOXB7P09629 217 aa13.56□□□□□ -0.24
CASP3-201ENST00000308394 CHRM1P11229 460 aaPredicted RBP13.56□□□□□ -0.24
CASP3-201ENST00000308394 BCL9LQ86UU0 1499 aa13.55□□□□□ -0.24
CASP3-201ENST00000308394 PRAMEF22A3QJZ6 481 aa13.55□□□□□ -0.24
CASP3-201ENST00000308394 G2E3Q7L622 706 aa13.55□□□□□ -0.24
CASP3-201ENST00000308394 SIPA1L3O60292 1781 aaPredicted RBP13.55□□□□□ -0.24
CASP3-201ENST00000308394 VPS72Q15906 364 aa13.55□□□□□ -0.24
CASP3-201ENST00000308394 FAM98CQ17RN3 349 aaKnown RBP13.55□□□□□ -0.24
CASP3-201ENST00000308394 DDX19BQ9UMR2 479 aa13.55□□□□□ -0.24
CASP3-201ENST00000308394 PTPRCP08575 1304 aa13.54□□□□□ -0.24
CASP3-201ENST00000308394 BARGINQ6ZT62 677 aa13.54□□□□□ -0.24
CASP3-201ENST00000308394 ZNF496Q96IT1 587 aaPredicted RBP13.54□□□□□ -0.24
CASP3-201ENST00000308394 TMOD3Q9NYL9 352 aa13.54□□□□□ -0.24
CASP3-201ENST00000308394 SHANK3Q9BYB0 1731 aa13.54□□□□□ -0.24
CASP3-201ENST00000308394 MRC1P22897 1456 aa13.54□□□□□ -0.24
CASP3-201ENST00000308394 A0A0G2JS52 829 aa13.54□□□□□ -0.24
CASP3-201ENST00000308394 FMNL2Q96PY5 1086 aa13.53□□□□□ -0.24
CASP3-201ENST00000308394 CHPF2Q9P2E5 772 aa13.53□□□□□ -0.24
CASP3-201ENST00000308394 CLSTN1O94985 981 aa13.53□□□□□ -0.24
CASP3-201ENST00000308394 FLIIQ13045 1269 aa13.53□□□□□ -0.24
CASP3-201ENST00000308394 FKBP5Q13451 457 aaPredicted RBP13.53□□□□□ -0.24
CASP3-201ENST00000308394 SYTL4Q96C24 671 aaPredicted RBP13.53□□□□□ -0.24
CASP3-201ENST00000308394 HEG1Q9ULI3 1381 aa13.52□□□□□ -0.24
CASP3-201ENST00000308394 ABCC4O15439 1325 aa13.52□□□□□ -0.24
CASP3-201ENST00000308394 TNS2Q63HR2 1409 aa13.52□□□□□ -0.25
CASP3-201ENST00000308394 SLC4A10Q6U841 1118 aa13.52□□□□□ -0.25
CASP3-201ENST00000308394 BBXQ8WY36 941 aaPredicted RBP13.52□□□□□ -0.25
CASP3-201ENST00000308394 F6X3S4 739 aa13.51□□□□□ -0.25
CASP3-201ENST00000308394 ANXA1P04083 346 aa13.51□□□□□ -0.25
CASP3-201ENST00000308394 SNRPA1P09661 255 aaKnown RBP13.51□□□□□ -0.25
CASP3-201ENST00000308394 PHAXQ9H814 394 aaKnown RBP13.51□□□□□ -0.25
CASP3-201ENST00000308394 AFF2P51816 1311 aa13.51□□□□□ -0.25
CASP3-201ENST00000308394 PTCD1O75127 700 aaKnown RBP13.51□□□□□ -0.25
CASP3-201ENST00000308394 DBF4Q9UBU7 674 aaPredicted RBP13.51□□□□□ -0.25
CASP3-201ENST00000308394 PIGBQ92521 554 aa13.5□□□□□ -0.25
CASP3-201ENST00000308394 MARCH10Q8NA82 808 aaPredicted RBP13.49□□□□□ -0.25
CASP3-201ENST00000308394 USP16Q9Y5T5 823 aa13.49□□□□□ -0.25
CASP3-201ENST00000308394 WNK3Q9BYP7 1800 aa13.49□□□□□ -0.25
CASP3-201ENST00000308394 KCNG1Q9UIX4 513 aa13.49□□□□□ -0.25
CASP3-201ENST00000308394 PCDHB15Q9Y5E8 787 aa13.49□□□□□ -0.25
CASP3-201ENST00000308394 RGS12O14924 1447 aa13.48□□□□□ -0.25
CASP3-201ENST00000308394 ZBTB7BO15156 539 aaPredicted RBP13.48□□□□□ -0.25
CASP3-201ENST00000308394 PRIM1P49642 420 aaKnown RBP13.48□□□□□ -0.25
CASP3-201ENST00000308394 ASAP1Q9ULH1 1129 aa13.48□□□□□ -0.25
CASP3-201ENST00000308394 PROSER3Q2NL68 480 aa13.48□□□□□ -0.25
CASP3-201ENST00000308394 INTS3Q68E01 1043 aaKnown RBP13.48□□□□□ -0.25
CASP3-201ENST00000308394 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
CASP3-201ENST00000308394 ZBTB40Q9NUA8 1239 aa13.48□□□□□ -0.25
CASP3-201ENST00000308394 MYL6BP14649 208 aa13.47□□□□□ -0.25
CASP3-201ENST00000308394 GJD4Q96KN9 370 aaPredicted RBP13.47□□□□□ -0.25
CASP3-201ENST00000308394 TOGARAM1Q9Y4F4 1720 aa13.47□□□□□ -0.25
CASP3-201ENST00000308394 RNF216Q9NWF9 866 aaPredicted RBP13.47□□□□□ -0.25
CASP3-201ENST00000308394 HYPKQ9NX55 129 aa13.47□□□□□ -0.25
CASP3-201ENST00000308394 IGHDP01880 384 aa13.47□□□□□ -0.25
CASP3-201ENST00000308394 CENPQQ7L2Z9 268 aaPredicted RBP13.47□□□□□ -0.25
CASP3-201ENST00000308394 PSMD1Q99460 953 aa13.47□□□□□ -0.25
CASP3-201ENST00000308394 DDX21Q9NR30 783 aaKnown RBP eCLIP13.47□□□□□ -0.25
CASP3-201ENST00000308394 TRPC5Q9UL62 973 aaPredicted RBP13.47□□□□□ -0.25
CASP3-201ENST00000308394 KAT6BQ8WYB5 2073 aa13.46□□□□□ -0.25
CASP3-201ENST00000308394 CCT4P50991 539 aaKnown RBP13.46□□□□□ -0.25
CASP3-201ENST00000308394 AIMP1Q12904 312 aaKnown RBP13.46□□□□□ -0.25
CASP3-201ENST00000308394 RBM42Q9BTD8 480 aaKnown RBP13.46□□□□□ -0.25
CASP3-201ENST00000308394 ATG3Q9NT62 314 aa13.46□□□□□ -0.25
CASP3-201ENST00000308394 PIP4K2AP48426 406 aaPredicted RBP13.46□□□□□ -0.26
CASP3-201ENST00000308394 CERS3Q8IU89 383 aa13.46□□□□□ -0.26
CASP3-201ENST00000308394 PI4KAP2A4QPH2 592 aa13.45□□□□□ -0.26
CASP3-201ENST00000308394 PDIA6Q15084 440 aa13.45□□□□□ -0.26
CASP3-201ENST00000308394 PI4KAP1Q8N8J0 262 aa13.45□□□□□ -0.26
CASP3-201ENST00000308394 C1orf115Q9H7X2 142 aa13.45□□□□□ -0.26
CASP3-201ENST00000308394 QTRT2Q9H974 415 aaKnown RBP13.45□□□□□ -0.26
CASP3-201ENST00000308394 KDM2BQ8NHM5 1336 aa13.45□□□□□ -0.26
CASP3-201ENST00000308394 BCL9O00512 1426 aa13.45□□□□□ -0.26
CASP3-201ENST00000308394 ARID3AQ99856 593 aa13.45□□□□□ -0.26
CASP3-201ENST00000308394 RWDD1Q9H446 243 aaPredicted RBP13.45□□□□□ -0.26
CASP3-201ENST00000308394 C5P01031 1676 aa13.44□□□□□ -0.26
CASP3-201ENST00000308394 CACNA1FO60840 1977 aa13.44□□□□□ -0.26
CASP3-201ENST00000308394 KCPQ6ZWJ8 1503 aa13.43□□□□□ -0.26
CASP3-201ENST00000308394 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.43□□□□□ -0.26
CASP3-201ENST00000308394 CWC22Q9HCG8 908 aaKnown RBP13.43□□□□□ -0.26
CASP3-201ENST00000308394 DDX58O95786 925 aaKnown RBP13.43□□□□□ -0.26
CASP3-201ENST00000308394 DNAAF4Q8WXU2 420 aa13.43□□□□□ -0.26
CASP3-201ENST00000308394 MEIS3Q99687 375 aa13.43□□□□□ -0.26
CASP3-201ENST00000308394 ITGB4P16144 1822 aa13.42□□□□□ -0.26
CASP3-201ENST00000308394 COPS6Q7L5N1 327 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms