RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 DZIP1Q86YF9 867 aaKnown RBP18.28■□□□□ 0.52
PPM1E-201ENST00000308249 CETN1Q12798 172 aa18.28■□□□□ 0.52
PPM1E-201ENST00000308249 MAP3K9P80192 1104 aa18.27■□□□□ 0.52
PPM1E-201ENST00000308249 ANO10Q9NW15 660 aa18.27■□□□□ 0.52
PPM1E-201ENST00000308249 SPG7Q9UQ90 795 aa18.27■□□□□ 0.52
PPM1E-201ENST00000308249 CEP112Q8N8E3 955 aa18.27■□□□□ 0.52
PPM1E-201ENST00000308249 ZNF444Q8N0Y2 327 aaPredicted RBP18.27■□□□□ 0.52
PPM1E-201ENST00000308249 SYNCQ9H7C4 482 aa18.27■□□□□ 0.51
PPM1E-201ENST00000308249 JADE2Q9NQC1 790 aa18.27■□□□□ 0.51
PPM1E-201ENST00000308249 NLRP5P59047 1200 aa18.26■□□□□ 0.51
PPM1E-201ENST00000308249 IDEP14735 1019 aa18.26■□□□□ 0.51
PPM1E-201ENST00000308249 CCDC63Q8NA47 563 aa18.26■□□□□ 0.51
PPM1E-201ENST00000308249 RAB34Q9BZG1 259 aa18.26■□□□□ 0.51
PPM1E-201ENST00000308249 KIF2AO00139 706 aaPredicted RBP18.26■□□□□ 0.51
PPM1E-201ENST00000308249 KIF20AO95235 890 aa18.26■□□□□ 0.51
PPM1E-201ENST00000308249 MNAT1P51948 309 aa18.26■□□□□ 0.51
PPM1E-201ENST00000308249 BICD1Q96G01 975 aa18.26■□□□□ 0.51
PPM1E-201ENST00000308249 IQCGQ9H095 443 aaKnown RBP18.26■□□□□ 0.51
PPM1E-201ENST00000308249 SLC4A8Q2Y0W8 1093 aa18.26■□□□□ 0.51
PPM1E-201ENST00000308249 SREK1Q8WXA9 508 aaKnown RBP18.26■□□□□ 0.51
PPM1E-201ENST00000308249 VAT1LQ9HCJ6 419 aa18.26■□□□□ 0.51
PPM1E-201ENST00000308249 C16orf45Q96MC5 204 aaPredicted RBP18.25■□□□□ 0.51
PPM1E-201ENST00000308249 CNTLNQ9NXG0 1405 aa18.25■□□□□ 0.51
PPM1E-201ENST00000308249 ISM2Q6H9L7 571 aa18.25■□□□□ 0.51
PPM1E-201ENST00000308249 CALCOCO1Q9P1Z2 691 aa18.25■□□□□ 0.51
PPM1E-201ENST00000308249 BTBD11A6QL63 1104 aa18.25■□□□□ 0.51
PPM1E-201ENST00000308249 CNNM3Q8NE01 707 aa18.25■□□□□ 0.51
PPM1E-201ENST00000308249 CTCFLQ8NI51 663 aaPredicted RBP18.25■□□□□ 0.51
PPM1E-201ENST00000308249 BIN1O00499 593 aa18.25■□□□□ 0.51
PPM1E-201ENST00000308249 RRP9O43818 475 aaKnown RBP18.25■□□□□ 0.51
PPM1E-201ENST00000308249 CAVIN4Q5BKX8 364 aa18.25■□□□□ 0.51
PPM1E-201ENST00000308249 CHD1LQ86WJ1 897 aa18.24■□□□□ 0.51
PPM1E-201ENST00000308249 CKAP2LQ8IYA6 745 aa18.24■□□□□ 0.51
PPM1E-201ENST00000308249 PANK2Q9BZ23 570 aa18.24■□□□□ 0.51
PPM1E-201ENST00000308249 PRPF40BQ6NWY9 871 aaKnown RBP18.24■□□□□ 0.51
PPM1E-201ENST00000308249 NAPBQ9H115 298 aa18.24■□□□□ 0.51
PPM1E-201ENST00000308249 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
PPM1E-201ENST00000308249 CCDC194A0A1B0GVG4 234 aa18.24■□□□□ 0.51
PPM1E-201ENST00000308249 CLGNO14967 610 aa18.24■□□□□ 0.51
PPM1E-201ENST00000308249 RAD54L2Q9Y4B4 1467 aa18.24■□□□□ 0.51
PPM1E-201ENST00000308249 GRM1Q13255 1194 aa18.24■□□□□ 0.51
PPM1E-201ENST00000308249 VTI1AQ96AJ9 217 aa18.24■□□□□ 0.51
PPM1E-201ENST00000308249 C8orf76Q96K31 380 aa18.24■□□□□ 0.51
PPM1E-201ENST00000308249 FHOD3Q2V2M9 1422 aa18.24■□□□□ 0.51
PPM1E-201ENST00000308249 BAG4O95429 457 aaKnown RBP18.23■□□□□ 0.51
PPM1E-201ENST00000308249 KIAA0753Q2KHM9 967 aa18.23■□□□□ 0.51
PPM1E-201ENST00000308249 TMC6Q7Z403 805 aa18.23■□□□□ 0.51
PPM1E-201ENST00000308249 EHMT1Q9H9B1 1298 aa18.23■□□□□ 0.51
PPM1E-201ENST00000308249 GJC1P36383 396 aa18.23■□□□□ 0.51
PPM1E-201ENST00000308249 XPCQ01831 940 aaPredicted RBP18.23■□□□□ 0.51
PPM1E-201ENST00000308249 MAP7D1Q3KQU3 841 aa18.23■□□□□ 0.51
PPM1E-201ENST00000308249 ANAPC4Q9UJX5 808 aa18.22■□□□□ 0.51
PPM1E-201ENST00000308249 RPUSD2Q8IZ73 545 aaKnown RBP18.22■□□□□ 0.51
PPM1E-201ENST00000308249 ZBTB9Q96C00 473 aa18.22■□□□□ 0.51
PPM1E-201ENST00000308249 CCDC144CPQ8IYA2 1237 aa18.22■□□□□ 0.51
PPM1E-201ENST00000308249 BBXQ8WY36 941 aaPredicted RBP18.22■□□□□ 0.51
PPM1E-201ENST00000308249 SLC12A7Q9Y666 1083 aa18.22■□□□□ 0.51
PPM1E-201ENST00000308249 HSF2BPO75031 334 aa18.22■□□□□ 0.51
PPM1E-201ENST00000308249 CCDC155Q8N6L0 562 aa18.22■□□□□ 0.51
PPM1E-201ENST00000308249 U3KPZ7 1027 aaPredicted RBP18.22■□□□□ 0.51
PPM1E-201ENST00000308249 RRBP1Q9P2E9 1410 aaKnown RBP18.21■□□□□ 0.51
PPM1E-201ENST00000308249 SSRP1Q08945 709 aaKnown RBP18.21■□□□□ 0.51
PPM1E-201ENST00000308249 TMCO4Q5TGY1 634 aa18.21■□□□□ 0.51
PPM1E-201ENST00000308249 DPH6Q7L8W6 267 aa18.21■□□□□ 0.51
PPM1E-201ENST00000308249 DNAAF4Q8WXU2 420 aa18.21■□□□□ 0.51
PPM1E-201ENST00000308249 HSPA4P34932 840 aa18.21■□□□□ 0.5
PPM1E-201ENST00000308249 PNISRQ8TF01 805 aaKnown RBP18.21■□□□□ 0.5
PPM1E-201ENST00000308249 ZHX1Q9UKY1 873 aaPredicted RBP18.21■□□□□ 0.5
PPM1E-201ENST00000308249 BOLA2Q9H3K6 86 aa18.2■□□□□ 0.5
PPM1E-201ENST00000308249 CALML4Q96GE6 196 aa18.2■□□□□ 0.5
PPM1E-201ENST00000308249 SLU7O95391 586 aaKnown RBP18.2■□□□□ 0.5
PPM1E-201ENST00000308249 ZSCAN30Q86W11 494 aa18.2■□□□□ 0.5
PPM1E-201ENST00000308249 LARP6Q9BRS8 491 aaKnown RBP18.2■□□□□ 0.5
PPM1E-201ENST00000308249 HYPKQ9NX55 129 aa18.2■□□□□ 0.5
PPM1E-201ENST00000308249 ECM2O94769 699 aaPredicted RBP18.2■□□□□ 0.5
PPM1E-201ENST00000308249 LRRC45Q96CN5 670 aa18.2■□□□□ 0.5
PPM1E-201ENST00000308249 PHAXQ9H814 394 aaKnown RBP18.2■□□□□ 0.5
PPM1E-201ENST00000308249 NOL3O60936 208 aaKnown RBP18.2■□□□□ 0.5
PPM1E-201ENST00000308249 MCM4P33991 863 aa18.2■□□□□ 0.5
PPM1E-201ENST00000308249 CCDC174Q6PII3 467 aa18.2■□□□□ 0.5
PPM1E-201ENST00000308249 ZPR1O75312 459 aa18.19■□□□□ 0.5
PPM1E-201ENST00000308249 CCT2P78371 535 aaKnown RBP18.19■□□□□ 0.5
PPM1E-201ENST00000308249 SEPT6Q14141 434 aa18.19■□□□□ 0.5
PPM1E-201ENST00000308249 LRSAM1Q6UWE0 723 aa18.19■□□□□ 0.5
PPM1E-201ENST00000308249 TTC36A6NLP5 189 aa18.19■□□□□ 0.5
PPM1E-201ENST00000308249 ZBTB16Q05516 673 aa18.19■□□□□ 0.5
PPM1E-201ENST00000308249 ODF2LQ9ULJ1 636 aa18.19■□□□□ 0.5
PPM1E-201ENST00000308249 EXOC6BQ9Y2D4 811 aa18.18■□□□□ 0.5
PPM1E-201ENST00000308249 CCDC196A0A1B0GTZ2 297 aa18.18■□□□□ 0.5
PPM1E-201ENST00000308249 KIF4AO95239 1232 aa18.18■□□□□ 0.5
PPM1E-201ENST00000308249 TXNDC2Q86VQ3 553 aa18.18■□□□□ 0.5
PPM1E-201ENST00000308249 IQCA1Q86XH1 822 aa18.18■□□□□ 0.5
PPM1E-201ENST00000308249 SMC1BQ8NDV3 1235 aa18.18■□□□□ 0.5
PPM1E-201ENST00000308249 GOLGA8AA7E2F4 631 aa18.18■□□□□ 0.5
PPM1E-201ENST00000308249 GOLGA8BA8MQT2 603 aa18.18■□□□□ 0.5
PPM1E-201ENST00000308249 CKAP4Q07065 602 aaKnown RBP18.18■□□□□ 0.5
PPM1E-201ENST00000308249 PPP4R3BQ5MIZ7 849 aa18.18■□□□□ 0.5
PPM1E-201ENST00000308249 CCDC183Q5T5S1 534 aa18.18■□□□□ 0.5
PPM1E-201ENST00000308249 SMC6Q96SB8 1091 aa18.17■□□□□ 0.5
PPM1E-201ENST00000308249 TMEM110-MUSTN1A8MSY1 372 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms