RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 C8orf76Q96K31 380 aa24.36■■□□□ 1.49
LTBP3-201ENST00000301873 STIM1Q13586 685 aa24.36■■□□□ 1.49
LTBP3-201ENST00000301873 KRT28Q7Z3Y7 464 aa24.36■■□□□ 1.49
LTBP3-201ENST00000301873 RHPN1Q8TCX5 695 aa24.36■■□□□ 1.49
LTBP3-201ENST00000301873 DACH1Q9UI36 760 aa24.36■■□□□ 1.49
LTBP3-201ENST00000301873 GOLIM4O00461 696 aa24.36■■□□□ 1.49
LTBP3-201ENST00000301873 DENND4BO75064 1496 aaPredicted RBP24.35■■□□□ 1.49
LTBP3-201ENST00000301873 TCEANC2Q96MN5 208 aa24.35■■□□□ 1.49
LTBP3-201ENST00000301873 PLEKHH1Q9ULM0 1364 aa24.35■■□□□ 1.49
LTBP3-201ENST00000301873 SKIDA1Q1XH10 827 aa24.35■■□□□ 1.49
LTBP3-201ENST00000301873 ZSCAN29Q8IWY8 852 aaPredicted RBP24.35■■□□□ 1.49
LTBP3-201ENST00000301873 CCDC183Q5T5S1 534 aa24.34■■□□□ 1.49
LTBP3-201ENST00000301873 PRAG1Q86YV5 1406 aa24.34■■□□□ 1.49
LTBP3-201ENST00000301873 EVI5LQ96CN4 794 aa24.34■■□□□ 1.49
LTBP3-201ENST00000301873 RBM5P52756 815 aaKnown RBP eCLIP24.34■■□□□ 1.49
LTBP3-201ENST00000301873 SETQ01105 290 aaPredicted RBP24.34■■□□□ 1.49
LTBP3-201ENST00000301873 KDM5BQ9UGL1 1544 aa24.34■■□□□ 1.49
LTBP3-201ENST00000301873 TANGO6Q9C0B7 1094 aa24.34■■□□□ 1.49
LTBP3-201ENST00000301873 PPP1R1BQ9UD71 204 aaPredicted RBP24.33■■□□□ 1.49
LTBP3-201ENST00000301873 ZNF213O14771 459 aa24.33■■□□□ 1.49
LTBP3-201ENST00000301873 PHACTR3Q96KR7 559 aa24.33■■□□□ 1.49
LTBP3-201ENST00000301873 PEG3Q9GZU2 1588 aa24.33■■□□□ 1.48
LTBP3-201ENST00000301873 ADAMTS2O95450 1211 aa24.32■■□□□ 1.48
LTBP3-201ENST00000301873 PDE1AP54750 535 aa24.32■■□□□ 1.48
LTBP3-201ENST00000301873 HAND2P61296 217 aa24.32■■□□□ 1.48
LTBP3-201ENST00000301873 C8orf34Q49A92 452 aa24.32■■□□□ 1.48
LTBP3-201ENST00000301873 LDHAL6AQ6ZMR3 332 aa24.32■■□□□ 1.48
LTBP3-201ENST00000301873 DEF6Q9H4E7 631 aa24.32■■□□□ 1.48
LTBP3-201ENST00000301873 RALGAPBQ86X10 1494 aa24.32■■□□□ 1.48
LTBP3-201ENST00000301873 STX6O43752 255 aa24.32■■□□□ 1.48
LTBP3-201ENST00000301873 ANKRD44Q8N8A2 993 aa24.32■■□□□ 1.48
LTBP3-201ENST00000301873 KLHL10Q6JEL2 608 aa24.32■■□□□ 1.48
LTBP3-201ENST00000301873 RBM27Q9P2N5 1060 aaKnown RBP24.32■■□□□ 1.48
LTBP3-201ENST00000301873 NUP153P49790 1475 aaKnown RBP24.31■■□□□ 1.48
LTBP3-201ENST00000301873 IFNL2Q8IZJ0 200 aa24.31■■□□□ 1.48
LTBP3-201ENST00000301873 CHPF2Q9P2E5 772 aa24.31■■□□□ 1.48
LTBP3-201ENST00000301873 ANKRD24Q8TF21 1146 aa24.31■■□□□ 1.48
LTBP3-201ENST00000301873 GJB2P29033 226 aa24.3■■□□□ 1.48
LTBP3-201ENST00000301873 WASF1Q92558 559 aa24.3■■□□□ 1.48
LTBP3-201ENST00000301873 TMX3Q96JJ7 454 aa24.3■■□□□ 1.48
LTBP3-201ENST00000301873 SLC39A6Q13433 755 aa24.3■■□□□ 1.48
LTBP3-201ENST00000301873 EIF4A2Q14240 407 aaKnown RBP24.3■■□□□ 1.48
LTBP3-201ENST00000301873 CBFA2T2O43439 604 aa24.3■■□□□ 1.48
LTBP3-201ENST00000301873 USP5P45974 858 aa24.3■■□□□ 1.48
LTBP3-201ENST00000301873 KAT6BQ8WYB5 2073 aa24.3■■□□□ 1.48
LTBP3-201ENST00000301873 VAMP4O75379 141 aa24.3■■□□□ 1.48
LTBP3-201ENST00000301873 MAP3K12Q12852 859 aa24.3■■□□□ 1.48
LTBP3-201ENST00000301873 NOM1Q5C9Z4 860 aaKnown RBP24.3■■□□□ 1.48
LTBP3-201ENST00000301873 ANKRD13DQ6ZTN6 518 aa24.3■■□□□ 1.48
LTBP3-201ENST00000301873 UGGT2Q9NYU1 1516 aa24.29■■□□□ 1.48
LTBP3-201ENST00000301873 RAB11FIP4Q86YS3 637 aa24.29■■□□□ 1.48
LTBP3-201ENST00000301873 CDR1P51861 262 aa24.29■■□□□ 1.48
LTBP3-201ENST00000301873 MRPL50Q8N5N7 158 aaKnown RBP24.29■■□□□ 1.48
LTBP3-201ENST00000301873 ERCC4Q92889 916 aaPredicted RBP24.29■■□□□ 1.48
LTBP3-201ENST00000301873 SMTNL1A8MU46 457 aa24.29■■□□□ 1.48
LTBP3-201ENST00000301873 RANBP6O60518 1105 aaKnown RBP24.29■■□□□ 1.48
LTBP3-201ENST00000301873 DDX46Q7L014 1031 aaKnown RBP24.29■■□□□ 1.48
LTBP3-201ENST00000301873 BIVM-ERCC5R4GMW8 1640 aa24.29■■□□□ 1.48
LTBP3-201ENST00000301873 PIK3R4Q99570 1358 aa24.28■■□□□ 1.48
LTBP3-201ENST00000301873 AXDND1Q5T1B0 1012 aaPredicted RBP24.28■■□□□ 1.48
LTBP3-201ENST00000301873 NECAB1Q8N987 351 aa24.28■■□□□ 1.48
LTBP3-201ENST00000301873 HMGB1P09429 215 aaKnown RBP24.28■■□□□ 1.48
LTBP3-201ENST00000301873 SFPQP23246 707 aaKnown RBP eCLIP24.28■■□□□ 1.48
LTBP3-201ENST00000301873 GOLGA8BA8MQT2 603 aa24.28■■□□□ 1.48
LTBP3-201ENST00000301873 DHX8Q14562 1220 aaKnown RBP24.27■■□□□ 1.48
LTBP3-201ENST00000301873 PLCH2O75038 1416 aa24.27■■□□□ 1.48
LTBP3-201ENST00000301873 CAVIN4Q5BKX8 364 aa24.27■■□□□ 1.48
LTBP3-201ENST00000301873 ANO10Q9NW15 660 aa24.27■■□□□ 1.48
LTBP3-201ENST00000301873 SEC24BO95487 1268 aa24.27■■□□□ 1.48
LTBP3-201ENST00000301873 IFIT3O14879 490 aaKnown RBP24.26■■□□□ 1.47
LTBP3-201ENST00000301873 COPS6Q7L5N1 327 aa24.26■■□□□ 1.47
LTBP3-201ENST00000301873 ASXL1Q8IXJ9 1541 aa24.26■■□□□ 1.47
LTBP3-201ENST00000301873 NCKAP5LQ9HCH0 1330 aa24.26■■□□□ 1.47
LTBP3-201ENST00000301873 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
LTBP3-201ENST00000301873 MKNK2Q9HBH9 465 aa24.26■■□□□ 1.47
LTBP3-201ENST00000301873 POLR3AO14802 1390 aaPredicted RBP24.26■■□□□ 1.47
LTBP3-201ENST00000301873 BIN1O00499 593 aa24.26■■□□□ 1.47
LTBP3-201ENST00000301873 BMP2KQ9NSY1 1161 aaPredicted RBP24.26■■□□□ 1.47
LTBP3-201ENST00000301873 ANKRD18BA2A2Z9 1011 aa24.25■■□□□ 1.47
LTBP3-201ENST00000301873 PANK2Q9BZ23 570 aa24.25■■□□□ 1.47
LTBP3-201ENST00000301873 USP16Q9Y5T5 823 aa24.25■■□□□ 1.47
LTBP3-201ENST00000301873 KLHL40Q2TBA0 621 aa24.25■■□□□ 1.47
LTBP3-201ENST00000301873 FSIP1Q8NA03 581 aa24.25■■□□□ 1.47
LTBP3-201ENST00000301873 NEK1Q96PY6 1258 aa24.25■■□□□ 1.47
LTBP3-201ENST00000301873 LRRC2Q9BYS8 371 aa24.25■■□□□ 1.47
LTBP3-201ENST00000301873 TRAPPC8Q9Y2L5 1435 aa24.24■■□□□ 1.47
LTBP3-201ENST00000301873 CCDC196A0A1B0GTZ2 297 aa24.24■■□□□ 1.47
LTBP3-201ENST00000301873 MTHFSDQ2M296 383 aaKnown RBP24.24■■□□□ 1.47
LTBP3-201ENST00000301873 XAGE3Q8WTP9 111 aa24.24■■□□□ 1.47
LTBP3-201ENST00000301873 SNRPA1P09661 255 aaKnown RBP24.24■■□□□ 1.47
LTBP3-201ENST00000301873 BRF1Q92994 677 aa24.24■■□□□ 1.47
LTBP3-201ENST00000301873 ZNF652Q9Y2D9 606 aa24.24■■□□□ 1.47
LTBP3-201ENST00000301873 POLR3DP05423 398 aaPredicted RBP24.24■■□□□ 1.47
LTBP3-201ENST00000301873 EIF5P55010 431 aaKnown RBP24.24■■□□□ 1.47
LTBP3-201ENST00000301873 CCDC144CPQ8IYA2 1237 aa24.24■■□□□ 1.47
LTBP3-201ENST00000301873 PHF23Q9BUL5 403 aaPredicted RBP24.24■■□□□ 1.47
LTBP3-201ENST00000301873 SLC12A7Q9Y666 1083 aa24.24■■□□□ 1.47
LTBP3-201ENST00000301873 CWC25Q9NXE8 425 aaPredicted RBP24.23■■□□□ 1.47
LTBP3-201ENST00000301873 HCLS1P14317 486 aaPredicted RBP24.23■■□□□ 1.47
LTBP3-201ENST00000301873 ARHGAP29Q52LW3 1261 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms