RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 LRRC37A3O60309 1634 aa13.69□□□□□ -0.22
IDH3A-201ENST00000299518 KCNH5Q8NCM2 988 aa13.69□□□□□ -0.22
IDH3A-201ENST00000299518 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
IDH3A-201ENST00000299518 NPHP4O75161 1426 aaPredicted RBP13.69□□□□□ -0.22
IDH3A-201ENST00000299518 PLEKHO1Q53GL0 409 aaPredicted RBP13.69□□□□□ -0.22
IDH3A-201ENST00000299518 AKAP4Q5JQC9 854 aa13.69□□□□□ -0.22
IDH3A-201ENST00000299518 NFATC2IPQ8NCF5 419 aa13.69□□□□□ -0.22
IDH3A-201ENST00000299518 CHMLP26374 656 aa13.68□□□□□ -0.22
IDH3A-201ENST00000299518 GIGYF1O75420 1035 aaPredicted RBP13.68□□□□□ -0.22
IDH3A-201ENST00000299518 CPA1P15085 419 aa13.68□□□□□ -0.22
IDH3A-201ENST00000299518 ESYT1Q9BSJ8 1104 aa13.68□□□□□ -0.22
IDH3A-201ENST00000299518 SIL1Q9H173 461 aa13.68□□□□□ -0.22
IDH3A-201ENST00000299518 RHPN1Q8TCX5 695 aa13.67□□□□□ -0.22
IDH3A-201ENST00000299518 OS9Q13438 667 aaPredicted RBP13.67□□□□□ -0.22
IDH3A-201ENST00000299518 RABEP1Q15276 862 aa13.67□□□□□ -0.22
IDH3A-201ENST00000299518 MCTP1Q6DN14 999 aa13.67□□□□□ -0.22
IDH3A-201ENST00000299518 CASC1Q6TDU7 716 aa13.67□□□□□ -0.22
IDH3A-201ENST00000299518 SSH3Q8TE77 659 aa13.66□□□□□ -0.22
IDH3A-201ENST00000299518 SPG7Q9UQ90 795 aa13.66□□□□□ -0.22
IDH3A-201ENST00000299518 CSB-PGBD3P0DP91 1061 aa13.66□□□□□ -0.22
IDH3A-201ENST00000299518 COL9A3Q14050 684 aaPredicted RBP13.66□□□□□ -0.22
IDH3A-201ENST00000299518 OSBPL3Q9H4L5 887 aa13.66□□□□□ -0.22
IDH3A-201ENST00000299518 C9orf78Q9NZ63 289 aaPredicted RBP13.66□□□□□ -0.22
IDH3A-201ENST00000299518 GOLGA6L3A6NEY3 463 aa13.66□□□□□ -0.22
IDH3A-201ENST00000299518 NCLP19338 710 aaKnown RBP13.66□□□□□ -0.22
IDH3A-201ENST00000299518 ZDHHC9Q9Y397 364 aa13.65□□□□□ -0.22
IDH3A-201ENST00000299518 CCDC9Q9Y3X0 531 aaKnown RBP13.65□□□□□ -0.22
IDH3A-201ENST00000299518 REC8O95072 547 aa13.65□□□□□ -0.22
IDH3A-201ENST00000299518 CWC27Q6UX04 472 aaKnown RBP13.65□□□□□ -0.22
IDH3A-201ENST00000299518 NDUFB9Q9Y6M9 179 aa13.65□□□□□ -0.22
IDH3A-201ENST00000299518 BAG4O95429 457 aaKnown RBP13.64□□□□□ -0.23
IDH3A-201ENST00000299518 ERBB3P21860 1342 aa13.64□□□□□ -0.23
IDH3A-201ENST00000299518 PI4K2BQ8TCG2 481 aa13.64□□□□□ -0.23
IDH3A-201ENST00000299518 USP16Q9Y5T5 823 aa13.64□□□□□ -0.23
IDH3A-201ENST00000299518 KAZALD1Q96I82 304 aa13.64□□□□□ -0.23
IDH3A-201ENST00000299518 CHGBP05060 677 aa13.63□□□□□ -0.23
IDH3A-201ENST00000299518 SUCLG2Q96I99 432 aa13.63□□□□□ -0.23
IDH3A-201ENST00000299518 TLR7Q9NYK1 1049 aaKnown RBP13.63□□□□□ -0.23
IDH3A-201ENST00000299518 DBF4Q9UBU7 674 aaPredicted RBP13.63□□□□□ -0.23
IDH3A-201ENST00000299518 POLA2Q14181 598 aa13.63□□□□□ -0.23
IDH3A-201ENST00000299518 ZNF496Q96IT1 587 aaPredicted RBP13.63□□□□□ -0.23
IDH3A-201ENST00000299518 TMX3Q96JJ7 454 aa13.63□□□□□ -0.23
IDH3A-201ENST00000299518 CCDC8Q9H0W5 538 aaPredicted RBP13.63□□□□□ -0.23
IDH3A-201ENST00000299518 PDIA6Q15084 440 aa13.62□□□□□ -0.23
IDH3A-201ENST00000299518 GOLGB1Q14789 3259 aaKnown RBP13.62□□□□□ -0.23
IDH3A-201ENST00000299518 C19orf44Q9H6X5 657 aa13.62□□□□□ -0.23
IDH3A-201ENST00000299518 RBM27Q9P2N5 1060 aaKnown RBP13.62□□□□□ -0.23
IDH3A-201ENST00000299518 NSFL1CQ9UNZ2 370 aaKnown RBP13.62□□□□□ -0.23
IDH3A-201ENST00000299518 TMEM94Q12767 1356 aa13.62□□□□□ -0.23
IDH3A-201ENST00000299518 FSD2A1L4K1 749 aa13.62□□□□□ -0.23
IDH3A-201ENST00000299518 DDX11L8A8MPP1 907 aa13.62□□□□□ -0.23
IDH3A-201ENST00000299518 BICC1Q9H694 974 aaKnown RBP13.62□□□□□ -0.23
IDH3A-201ENST00000299518 C1orf167Q5SNV9 1468 aa13.62□□□□□ -0.23
IDH3A-201ENST00000299518 ATP5J2-PTCD1G3V325 749 aa13.62□□□□□ -0.23
IDH3A-201ENST00000299518 PTCD1O75127 700 aaKnown RBP13.62□□□□□ -0.23
IDH3A-201ENST00000299518 EPHA10Q5JZY3 1008 aa13.62□□□□□ -0.23
IDH3A-201ENST00000299518 RASEFQ8IZ41 740 aa13.62□□□□□ -0.23
IDH3A-201ENST00000299518 RAPGEF4Q8WZA2 1011 aa13.62□□□□□ -0.23
IDH3A-201ENST00000299518 EDC3Q96F86 508 aaKnown RBP13.62□□□□□ -0.23
IDH3A-201ENST00000299518 GBP4Q96PP9 640 aa13.62□□□□□ -0.23
IDH3A-201ENST00000299518 ANO8Q9HCE9 1232 aaPredicted RBP13.62□□□□□ -0.23
IDH3A-201ENST00000299518 RRAGDQ9NQL2 400 aaPredicted RBP13.62□□□□□ -0.23
IDH3A-201ENST00000299518 CACNA1FO60840 1977 aa13.61□□□□□ -0.23
IDH3A-201ENST00000299518 ST18O60284 1047 aa13.61□□□□□ -0.23
IDH3A-201ENST00000299518 ATF3P18847 181 aa13.61□□□□□ -0.23
IDH3A-201ENST00000299518 GDPD2Q9HCC8 539 aa13.61□□□□□ -0.23
IDH3A-201ENST00000299518 KAT6BQ8WYB5 2073 aa13.61□□□□□ -0.23
IDH3A-201ENST00000299518 DDX49Q9Y6V7 483 aaKnown RBP13.61□□□□□ -0.23
IDH3A-201ENST00000299518 IGKV5-2P06315 115 aa13.61□□□□□ -0.23
IDH3A-201ENST00000299518 ZNF790Q6PG37 636 aa13.61□□□□□ -0.23
IDH3A-201ENST00000299518 CYP27B1O15528 508 aa13.6□□□□□ -0.23
IDH3A-201ENST00000299518 PRPF40AO75400 957 aaKnown RBP13.6□□□□□ -0.23
IDH3A-201ENST00000299518 AMOTQ4VCS5 1084 aa13.6□□□□□ -0.23
IDH3A-201ENST00000299518 COPS6Q7L5N1 327 aa13.6□□□□□ -0.23
IDH3A-201ENST00000299518 XAGE3Q8WTP9 111 aa13.6□□□□□ -0.23
IDH3A-201ENST00000299518 STAP2Q9UGK3 403 aa13.6□□□□□ -0.23
IDH3A-201ENST00000299518 KSR2Q6VAB6 950 aa13.6□□□□□ -0.23
IDH3A-201ENST00000299518 RIC3Q7Z5B4 369 aa13.6□□□□□ -0.23
IDH3A-201ENST00000299518 CIZ1Q9ULV3 898 aaPredicted RBP13.59□□□□□ -0.23
IDH3A-201ENST00000299518 CAVIN1Q6NZI2 390 aaKnown RBP13.59□□□□□ -0.23
IDH3A-201ENST00000299518 MYD88Q99836 296 aa13.59□□□□□ -0.23
IDH3A-201ENST00000299518 KDM3BQ7LBC6 1761 aa13.59□□□□□ -0.23
IDH3A-201ENST00000299518 MEGF6O75095 1541 aa13.59□□□□□ -0.23
IDH3A-201ENST00000299518 KIF1BPQ96EK5 621 aa13.59□□□□□ -0.23
IDH3A-201ENST00000299518 PTH1RQ03431 593 aa13.58□□□□□ -0.23
IDH3A-201ENST00000299518 AACSQ86V21 672 aa13.58□□□□□ -0.23
IDH3A-201ENST00000299518 GRPEL1Q9HAV7 217 aa13.58□□□□□ -0.23
IDH3A-201ENST00000299518 BABAM1Q9NWV8 329 aa13.58□□□□□ -0.23
IDH3A-201ENST00000299518 MED1Q15648 1581 aaPredicted RBP13.58□□□□□ -0.24
IDH3A-201ENST00000299518 KDM6AO15550 1401 aaPredicted RBP13.58□□□□□ -0.24
IDH3A-201ENST00000299518 TUBGCP6Q96RT7 1819 aa13.58□□□□□ -0.24
IDH3A-201ENST00000299518 SASH1O94885 1247 aa13.58□□□□□ -0.24
IDH3A-201ENST00000299518 NPHP3Q7Z494 1330 aa13.58□□□□□ -0.24
IDH3A-201ENST00000299518 ADAMTSL3P82987 1691 aa13.58□□□□□ -0.24
IDH3A-201ENST00000299518 PHKG2P15735 406 aa13.58□□□□□ -0.24
IDH3A-201ENST00000299518 EAF2Q96CJ1 260 aaPredicted RBP13.58□□□□□ -0.24
IDH3A-201ENST00000299518 TCEANC2Q96MN5 208 aa13.58□□□□□ -0.24
IDH3A-201ENST00000299518 FAM227BQ96M60 508 aa13.57□□□□□ -0.24
IDH3A-201ENST00000299518 BOLA2Q9H3K6 86 aa13.57□□□□□ -0.24
IDH3A-201ENST00000299518 SLC52A2Q9HAB3 445 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms