RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 NFIXQ14938 502 aa24.55■■□□□ 1.52
LRPAP1-201ENST00000296325 AMOTQ4VCS5 1084 aa24.55■■□□□ 1.52
LRPAP1-201ENST00000296325 TTLL6Q8N841 843 aa24.55■■□□□ 1.52
LRPAP1-201ENST00000296325 NFATC2IPQ8NCF5 419 aa24.55■■□□□ 1.52
LRPAP1-201ENST00000296325 CCDC88AQ3V6T2 1871 aa24.54■■□□□ 1.52
LRPAP1-201ENST00000296325 FOXN1O15353 648 aa24.54■■□□□ 1.52
LRPAP1-201ENST00000296325 PRDM10Q9NQV6 1147 aa24.54■■□□□ 1.52
LRPAP1-201ENST00000296325 ZPR1O75312 459 aa24.53■■□□□ 1.52
LRPAP1-201ENST00000296325 MTHFSP49914 203 aa24.53■■□□□ 1.52
LRPAP1-201ENST00000296325 MKRN1Q9UHC7 482 aaKnown RBP24.52■■□□□ 1.52
LRPAP1-201ENST00000296325 BCL2L12Q9HB09 334 aa24.51■■□□□ 1.51
LRPAP1-201ENST00000296325 NARFQ9UHQ1 456 aa24.51■■□□□ 1.51
LRPAP1-201ENST00000296325 CHADLQ6NUI6 762 aa24.5■■□□□ 1.51
LRPAP1-201ENST00000296325 DPY19L2Q6NUT2 758 aa24.5■■□□□ 1.51
LRPAP1-201ENST00000296325 DNAJC10Q8IXB1 793 aa24.5■■□□□ 1.51
LRPAP1-201ENST00000296325 CNTNAP1P78357 1384 aa24.5■■□□□ 1.51
LRPAP1-201ENST00000296325 CARMIL3Q8ND23 1372 aa24.5■■□□□ 1.51
LRPAP1-201ENST00000296325 SERPINB2P05120 415 aa24.49■■□□□ 1.51
LRPAP1-201ENST00000296325 DICER1Q9UPY3 1922 aaKnown RBP24.48■■□□□ 1.51
LRPAP1-201ENST00000296325 COL15A1P39059 1388 aa24.47■■□□□ 1.51
LRPAP1-201ENST00000296325 POTEIP0CG38 1075 aa24.47■■□□□ 1.51
LRPAP1-201ENST00000296325 POTEJP0CG39 1038 aa24.47■■□□□ 1.51
LRPAP1-201ENST00000296325 CYP19A1P11511 503 aaPredicted RBP24.47■■□□□ 1.51
LRPAP1-201ENST00000296325 C2CD5Q86YS7 1000 aa24.47■■□□□ 1.51
LRPAP1-201ENST00000296325 SCN11AQ9UI33 1791 aa24.47■■□□□ 1.51
LRPAP1-201ENST00000296325 C1orf141Q5JVX7 400 aa24.46■■□□□ 1.51
LRPAP1-201ENST00000296325 AEBP1Q8IUX7 1158 aa24.46■■□□□ 1.51
LRPAP1-201ENST00000296325 FER1L6Q2WGJ9 1857 aa24.45■■□□□ 1.51
LRPAP1-201ENST00000296325 PASKQ96RG2 1323 aa24.45■■□□□ 1.5
LRPAP1-201ENST00000296325 H0YIN7 160 aa24.45■■□□□ 1.5
LRPAP1-201ENST00000296325 TNNT2P45379 298 aaPredicted RBP24.44■■□□□ 1.5
LRPAP1-201ENST00000296325 ERFEQ4G0M1 354 aa24.44■■□□□ 1.5
LRPAP1-201ENST00000296325 LTBP3Q9NS15 1303 aa24.43■■□□□ 1.5
LRPAP1-201ENST00000296325 CTCFP49711 727 aaPredicted RBP24.43■■□□□ 1.5
LRPAP1-201ENST00000296325 ZBTB1Q9Y2K1 713 aa24.43■■□□□ 1.5
LRPAP1-201ENST00000296325 MRC1P22897 1456 aa24.43■■□□□ 1.5
LRPAP1-201ENST00000296325 ANKRD31Q8N7Z5 1873 aa24.42■■□□□ 1.5
LRPAP1-201ENST00000296325 SLC52A2Q9HAB3 445 aa24.41■■□□□ 1.5
LRPAP1-201ENST00000296325 WBP1LQ9NX94 342 aa24.4■■□□□ 1.5
LRPAP1-201ENST00000296325 DDNO94850 711 aaPredicted RBP24.39■■□□□ 1.49
LRPAP1-201ENST00000296325 COL11A2P13942 1736 aaPredicted RBP24.38■■□□□ 1.49
LRPAP1-201ENST00000296325 C21orf2O43822 256 aa24.38■■□□□ 1.49
LRPAP1-201ENST00000296325 VEGFBP49765 207 aa24.38■■□□□ 1.49
LRPAP1-201ENST00000296325 PDZRN3Q9UPQ7 1066 aa24.38■■□□□ 1.49
LRPAP1-201ENST00000296325 VIRMAQ69YN4 1812 aaKnown RBP24.38■■□□□ 1.49
LRPAP1-201ENST00000296325 L3MBTL3Q96JM7 780 aaPredicted RBP24.37■■□□□ 1.49
LRPAP1-201ENST00000296325 LDHDQ86WU2 507 aa24.36■■□□□ 1.49
LRPAP1-201ENST00000296325 AIDAQ96BJ3 306 aa24.36■■□□□ 1.49
LRPAP1-201ENST00000296325 BRIP1Q9BX63 1249 aa24.36■■□□□ 1.49
LRPAP1-201ENST00000296325 TAOK3Q9H2K8 898 aa24.36■■□□□ 1.49
LRPAP1-201ENST00000296325 ITGBL1O95965 494 aaPredicted RBP24.35■■□□□ 1.49
LRPAP1-201ENST00000296325 LBX1P52954 281 aa24.35■■□□□ 1.49
LRPAP1-201ENST00000296325 SLC39A6Q13433 755 aa24.35■■□□□ 1.49
LRPAP1-201ENST00000296325 AKAP4Q5JQC9 854 aa24.35■■□□□ 1.49
LRPAP1-201ENST00000296325 SULT6B1Q6IMI4 303 aa24.35■■□□□ 1.49
LRPAP1-201ENST00000296325 LGR6Q9HBX8 967 aa24.35■■□□□ 1.49
LRPAP1-201ENST00000296325 EIF5P55010 431 aaKnown RBP24.34■■□□□ 1.49
LRPAP1-201ENST00000296325 FAM161AQ3B820 660 aa24.34■■□□□ 1.49
LRPAP1-201ENST00000296325 VSIG10Q8N0Z9 540 aa24.34■■□□□ 1.49
LRPAP1-201ENST00000296325 ZNF622Q969S3 477 aaKnown RBP eCLIP24.34■■□□□ 1.495e-7■□□□□ 10.8
LRPAP1-201ENST00000296325 SCN4AP35499 1836 aa24.33■■□□□ 1.49
LRPAP1-201ENST00000296325 IQCA1LA6NCM1 817 aa24.33■■□□□ 1.49
LRPAP1-201ENST00000296325 TMEM88BA6NKF7 163 aa24.33■■□□□ 1.49
LRPAP1-201ENST00000296325 PDE6BP35913 854 aa24.33■■□□□ 1.49
LRPAP1-201ENST00000296325 ABHD8Q96I13 439 aa24.33■■□□□ 1.49
LRPAP1-201ENST00000296325 TAF1DQ9H5J8 278 aaPredicted RBP24.33■■□□□ 1.49
LRPAP1-201ENST00000296325 TBC1D9BQ66K14 1250 aa24.32■■□□□ 1.48
LRPAP1-201ENST00000296325 PRR5LQ6MZQ0 368 aa24.32■■□□□ 1.48
LRPAP1-201ENST00000296325 BICDL1Q6ZP65 573 aa24.32■■□□□ 1.48
LRPAP1-201ENST00000296325 ZNF219Q9P2Y4 722 aaPredicted RBP24.32■■□□□ 1.48
LRPAP1-201ENST00000296325 ADAMTSL1Q8N6G6 1762 aa24.31■■□□□ 1.48
LRPAP1-201ENST00000296325 SCN7AQ01118 1682 aa24.31■■□□□ 1.48
LRPAP1-201ENST00000296325 RNMTO43148 476 aaKnown RBP24.31■■□□□ 1.48
LRPAP1-201ENST00000296325 HSPA8P11142 646 aaKnown RBP24.31■■□□□ 1.48
LRPAP1-201ENST00000296325 UBR2Q8IWV8 1755 aa24.31■■□□□ 1.48
LRPAP1-201ENST00000296325 SLX4Q8IY92 1834 aa24.31■■□□□ 1.48
LRPAP1-201ENST00000296325 IL13P35225 146 aa24.3■■□□□ 1.48
LRPAP1-201ENST00000296325 RASSF10A6NK89 507 aa24.29■■□□□ 1.48
LRPAP1-201ENST00000296325 CANXP27824 592 aaKnown RBP24.28■■□□□ 1.48
LRPAP1-201ENST00000296325 ARFGEF2Q9Y6D5 1785 aa24.28■■□□□ 1.48
LRPAP1-201ENST00000296325 STYK1Q6J9G0 422 aa24.27■■□□□ 1.48
LRPAP1-201ENST00000296325 PRPF40BQ6NWY9 871 aaKnown RBP24.27■■□□□ 1.48
LRPAP1-201ENST00000296325 CCDC24Q8N4L8 307 aa24.27■■□□□ 1.48
LRPAP1-201ENST00000296325 CNKSR1Q969H4 720 aa24.27■■□□□ 1.48
LRPAP1-201ENST00000296325 PCDH10Q9P2E7 1040 aa24.27■■□□□ 1.48
LRPAP1-201ENST00000296325 A0A087WZG4 1122 aa24.26■■□□□ 1.47
LRPAP1-201ENST00000296325 SRGNP10124 158 aa24.26■■□□□ 1.47
LRPAP1-201ENST00000296325 SOGA3Q5TF21 947 aa24.26■■□□□ 1.47
LRPAP1-201ENST00000296325 C7orf43Q8WVR3 580 aa24.26■■□□□ 1.47
LRPAP1-201ENST00000296325 RGS19P49795 217 aa24.25■■□□□ 1.47
LRPAP1-201ENST00000296325 STARD3NLO95772 234 aa24.23■■□□□ 1.47
LRPAP1-201ENST00000296325 THSD7BQ9C0I4 1608 aa24.22■■□□□ 1.47
LRPAP1-201ENST00000296325 ZNF541Q9H0D2 1346 aa24.22■■□□□ 1.47
LRPAP1-201ENST00000296325 MAP2K1Q02750 393 aaPredicted RBP24.22■■□□□ 1.47
LRPAP1-201ENST00000296325 DEFB115Q30KQ5 88 aa24.22■■□□□ 1.47
LRPAP1-201ENST00000296325 WDR33Q9C0J8 1336 aaKnown RBP24.21■■□□□ 1.47
LRPAP1-201ENST00000296325 CNBD1Q8NA66 436 aa24.21■■□□□ 1.47
LRPAP1-201ENST00000296325 MASTLQ96GX5 879 aa24.21■■□□□ 1.47
LRPAP1-201ENST00000296325 PANK3Q9H999 370 aa24.21■■□□□ 1.47
LRPAP1-201ENST00000296325 CACNA1SQ13698 1873 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms