RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 LEKR1Q6ZMV7 388 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 PALM2Q8IXS6 379 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 NLRP2Q9NX02 1062 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 CETN3O15182 167 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 LIG1P18858 919 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 CTNNA2P26232 953 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 OTUD7BQ6GQQ9 843 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 WDR63Q8IWG1 891 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 ZFP91Q96JP5 570 aaPredicted RBP5.08□□□□□ -1.6
NCOA1-201ENST00000288599 RAI14Q9P0K7 980 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 ZKSCAN5Q9Y2L8 839 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 ZNF644Q9H582 1327 aaPredicted RBP5.08□□□□□ -1.6
NCOA1-201ENST00000288599 JAKMIP3Q5VZ66 844 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 N4BP2L2Q92802 583 aaPredicted RBP5.08□□□□□ -1.6
NCOA1-201ENST00000288599 LMCD1Q9NZU5 365 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.08□□□□□ -1.6
NCOA1-201ENST00000288599 NR1I2O75469 434 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 FAM43AQ8N2R8 423 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 CABP2Q9NPB3 220 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 ATXN8OSP0DMR3 200 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 BRPF1P55201 1214 aaPredicted RBP5.07□□□□□ -1.6
NCOA1-201ENST00000288599 FKBP15Q5T1M5 1219 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 ATF7IPQ6VMQ6 1270 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 BICD2Q8TD16 824 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 TMEM106CQ9BVX2 250 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 SYNDIG1Q9H7V2 258 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 ESYT2A0FGR8 921 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 GOLGA6L10A6NI86 522 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 ATP2C2O75185 946 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 EXOC4Q96A65 974 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 TANGO6Q9C0B7 1094 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 CFAP45Q9UL16 551 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 TROQ12816 1431 aaPredicted RBP5.07□□□□□ -1.6
NCOA1-201ENST00000288599 SHANK2Q9UPX8 1470 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 CT47B1P0C2W7 299 aaPredicted RBP5.07□□□□□ -1.6
NCOA1-201ENST00000288599 PFDN4Q9NQP4 134 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 PRG4Q92954 1404 aaPredicted RBP5.07□□□□□ -1.6
NCOA1-201ENST00000288599 ERLIN1O75477 346 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 ERCC5P28715 1186 aaPredicted RBP5.07□□□□□ -1.6
NCOA1-201ENST00000288599 PIP4K2AP48426 406 aaPredicted RBP5.07□□□□□ -1.6
NCOA1-201ENST00000288599 RNF214Q8ND24 703 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 ZC3H15Q8WU90 426 aaKnown RBP5.07□□□□□ -1.6
NCOA1-201ENST00000288599 JDP2Q8WYK2 163 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 RPGRQ92834 1020 aaKnown RBP5.07□□□□□ -1.6
NCOA1-201ENST00000288599 ZNF622Q969S3 477 aaKnown RBP eCLIP5.07□□□□□ -1.69e-7■■■□□ 16.8
NCOA1-201ENST00000288599 COPRSQ9NQ92 184 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 ZNF449Q6P9G9 518 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 CCDC174Q6PII3 467 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 CCT6BQ92526 530 aa5.07□□□□□ -1.6
NCOA1-201ENST00000288599 SRPK1Q96SB4 655 aaKnown RBP5.07□□□□□ -1.6
NCOA1-201ENST00000288599 CDC42BPBQ9Y5S2 1711 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 CDR2Q01850 454 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 INF2Q27J81 1249 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 KIF4BQ2VIQ3 1234 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 UIMC1Q96RL1 719 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 MKRN1Q9UHC7 482 aaKnown RBP5.06□□□□□ -1.6
NCOA1-201ENST00000288599 DDX11L8A8MPP1 907 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 M0QZ92 97 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 WDR46O15213 610 aaKnown RBP5.06□□□□□ -1.6
NCOA1-201ENST00000288599 ST18O60284 1047 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 FCHSD2O94868 740 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 GAS8O95995 478 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 MYD88Q99836 296 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 GMNNO75496 209 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 PRKCQQ04759 706 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 G3BP1Q13283 466 aaKnown RBP eCLIP5.06□□□□□ -1.6
NCOA1-201ENST00000288599 E4F1Q66K89 784 aaPredicted RBP5.06□□□□□ -1.6
NCOA1-201ENST00000288599 FAM177A1Q8N128 213 aaPredicted RBP5.06□□□□□ -1.6
NCOA1-201ENST00000288599 ERCC4Q92889 916 aaPredicted RBP5.06□□□□□ -1.6
NCOA1-201ENST00000288599 L3MBTL3Q96JM7 780 aaPredicted RBP5.06□□□□□ -1.6
NCOA1-201ENST00000288599 BRPF3Q9ULD4 1205 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 ATP10AO60312 1499 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 MAGI1Q96QZ7 1491 aaPredicted RBP5.06□□□□□ -1.6
NCOA1-201ENST00000288599 ATP2B3Q16720 1220 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 SLF2Q8IX21 1173 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 KRT23Q9C075 422 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 ZFYVE1Q9HBF4 777 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 ATP10BO94823 1461 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 KIAA0754O94854 1291 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 GABPAQ06546 454 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 PROSER2Q86WR7 435 aaPredicted RBP5.06□□□□□ -1.6
NCOA1-201ENST00000288599 CNNM1Q9NRU3 951 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 ZSCAN32Q9NX65 697 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 CNTLNQ9NXG0 1405 aa5.06□□□□□ -1.6
NCOA1-201ENST00000288599 CCDC66A2RUB6 948 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 SPECC1L-ADORA2AF8WAN1 911 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 FAM13AO94988 1023 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 SSBP05455 408 aaKnown RBP eCLIP5.05□□□□□ -1.6
NCOA1-201ENST00000288599 USP5P45974 858 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 BPIFB4P59827 614 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 STIM1Q13586 685 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 PATL1Q86TB9 770 aaKnown RBP5.05□□□□□ -1.6
NCOA1-201ENST00000288599 ZCRB1Q8TBF4 217 aaKnown RBP5.05□□□□□ -1.6
NCOA1-201ENST00000288599 GANCQ8TET4 914 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 PARD3BQ8TEW8 1205 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 NFKBIL1Q9UBC1 381 aaPredicted RBP5.05□□□□□ -1.6
NCOA1-201ENST00000288599 ATP6V1DQ9Y5K8 247 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 IVNS1ABPQ9Y6Y0 642 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 ADGBQ8N7X0 1667 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 CAMSAP2Q08AD1 1489 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms