RNA–Protein interactions for RNA: ENST00000288050.8

PDPR-201, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPR, Length 9,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-201ENST00000288050 KIF6Q6ZMV9 814 aa11.43□□□□□ -0.58
PDPR-201ENST00000288050 CIB2O75838 187 aa11.42□□□□□ -0.58
PDPR-201ENST00000288050 SRRTQ9BXP5 876 aaKnown RBP11.42□□□□□ -0.58
PDPR-201ENST00000288050 GRPEL1Q9HAV7 217 aa11.42□□□□□ -0.58
PDPR-201ENST00000288050 USP47Q96K76 1375 aa11.42□□□□□ -0.58
PDPR-201ENST00000288050 CTAGE6Q86UF2 777 aa11.42□□□□□ -0.58
PDPR-201ENST00000288050 CCDC89Q8N998 374 aa11.42□□□□□ -0.58
PDPR-201ENST00000288050 CABP2Q9NPB3 220 aa11.42□□□□□ -0.58
PDPR-201ENST00000288050 CEP131Q9UPN4 1083 aa11.42□□□□□ -0.58
PDPR-201ENST00000288050 ATP6V1E1P36543 226 aa11.42□□□□□ -0.58
PDPR-201ENST00000288050 SH2D4BQ5SQS7 431 aa11.42□□□□□ -0.58
PDPR-201ENST00000288050 WDR33Q9C0J8 1336 aaKnown RBP11.42□□□□□ -0.58
PDPR-201ENST00000288050 NAA16Q6N069 864 aaPredicted RBP11.42□□□□□ -0.58
PDPR-201ENST00000288050 ESCO1Q5FWF5 840 aa11.42□□□□□ -0.58
PDPR-201ENST00000288050 CCDC170Q8IYT3 715 aa11.42□□□□□ -0.58
PDPR-201ENST00000288050 CRBNQ96SW2 442 aa11.42□□□□□ -0.58
PDPR-201ENST00000288050 NUP88Q99567 741 aaPredicted RBP11.42□□□□□ -0.58
PDPR-201ENST00000288050 NLRP2Q9NX02 1062 aa11.42□□□□□ -0.58
PDPR-201ENST00000288050 RASAL2Q9UJF2 1139 aa11.42□□□□□ -0.58
PDPR-201ENST00000288050 MAP7Q14244 749 aa11.41□□□□□ -0.58
PDPR-201ENST00000288050 SPATA32Q96LK8 384 aa11.41□□□□□ -0.58
PDPR-201ENST00000288050 NACAP1Q9BZK3 213 aa11.41□□□□□ -0.58
PDPR-201ENST00000288050 A0A1B0GUA9 196 aa11.41□□□□□ -0.58
PDPR-201ENST00000288050 GOLIM4O00461 696 aa11.41□□□□□ -0.58
PDPR-201ENST00000288050 TTC39AQ5SRH9 613 aa11.41□□□□□ -0.58
PDPR-201ENST00000288050 ZNF644Q9H582 1327 aaPredicted RBP11.41□□□□□ -0.58
PDPR-201ENST00000288050 PFDN4Q9NQP4 134 aa11.41□□□□□ -0.58
PDPR-201ENST00000288050 MYBBP1AQ9BQG0 1328 aaKnown RBP11.41□□□□□ -0.58
PDPR-201ENST00000288050 UBTFL1P0CB47 393 aaPredicted RBP11.41□□□□□ -0.58
PDPR-201ENST00000288050 CCDC63Q8NA47 563 aa11.41□□□□□ -0.58
PDPR-201ENST00000288050 NUP62CLQ9H1M0 184 aa11.41□□□□□ -0.58
PDPR-201ENST00000288050 PRPF4BQ13523 1007 aaKnown RBP11.4□□□□□ -0.58
PDPR-201ENST00000288050 CFAP157Q5JU67 520 aa11.4□□□□□ -0.58
PDPR-201ENST00000288050 CHMP4BP1P59074 171 aa11.4□□□□□ -0.58
PDPR-201ENST00000288050 MVPQ14764 893 aaKnown RBP11.4□□□□□ -0.58
PDPR-201ENST00000288050 CUX1P39880 1505 aa11.4□□□□□ -0.58
PDPR-201ENST00000288050 CETN1Q12798 172 aa11.4□□□□□ -0.58
PDPR-201ENST00000288050 CALCOCO2Q13137 446 aa11.4□□□□□ -0.58
PDPR-201ENST00000288050 CCDC144CPQ8IYA2 1237 aa11.4□□□□□ -0.58
PDPR-201ENST00000288050 PDCD7Q8N8D1 485 aaKnown RBP11.4□□□□□ -0.58
PDPR-201ENST00000288050 PLVAPQ9BX97 442 aa11.4□□□□□ -0.58
PDPR-201ENST00000288050 TMEM132EQ6IEE7 984 aa11.4□□□□□ -0.58
PDPR-201ENST00000288050 CEP128Q6ZU80 1094 aa11.4□□□□□ -0.58
PDPR-201ENST00000288050 CACNA2D3Q8IZS8 1091 aa11.4□□□□□ -0.58
PDPR-201ENST00000288050 ALDH3A1P30838 453 aa11.4□□□□□ -0.58
PDPR-201ENST00000288050 MPNDQ8N594 471 aa11.4□□□□□ -0.59
PDPR-201ENST00000288050 ATP11AP98196 1134 aa11.39□□□□□ -0.59
PDPR-201ENST00000288050 CNGA1P29973 690 aa11.39□□□□□ -0.59
PDPR-201ENST00000288050 RIPK4P57078 832 aa11.39□□□□□ -0.59
PDPR-201ENST00000288050 EHBP1Q8NDI1 1231 aa11.39□□□□□ -0.59
PDPR-201ENST00000288050 RAB3IPQ96QF0 476 aaPredicted RBP11.39□□□□□ -0.59
PDPR-201ENST00000288050 PPP4R3BQ5MIZ7 849 aa11.39□□□□□ -0.59
PDPR-201ENST00000288050 VCXQ9H320 206 aa11.39□□□□□ -0.59
PDPR-201ENST00000288050 LACTBP83111 547 aaPredicted RBP11.39□□□□□ -0.59
PDPR-201ENST00000288050 WASF1Q92558 559 aa11.39□□□□□ -0.59
PDPR-201ENST00000288050 ESPNB1AK53 854 aa11.39□□□□□ -0.59
PDPR-201ENST00000288050 NEK4P51957 841 aa11.39□□□□□ -0.59
PDPR-201ENST00000288050 KIAA1524Q8TCG1 905 aa11.39□□□□□ -0.59
PDPR-201ENST00000288050 CYP46A1Q9Y6A2 500 aa11.39□□□□□ -0.59
PDPR-201ENST00000288050 YEATS4O95619 227 aa11.39□□□□□ -0.59
PDPR-201ENST00000288050 KIAA0753Q2KHM9 967 aa11.39□□□□□ -0.59
PDPR-201ENST00000288050 ABTB2Q8N961 1025 aa11.39□□□□□ -0.59
PDPR-201ENST00000288050 RAPGEF4Q8WZA2 1011 aa11.39□□□□□ -0.59
PDPR-201ENST00000288050 URI1O94763 535 aaPredicted RBP11.38□□□□□ -0.59
PDPR-201ENST00000288050 LIG1P18858 919 aa11.38□□□□□ -0.59
PDPR-201ENST00000288050 AAMPQ13685 434 aa11.38□□□□□ -0.59
PDPR-201ENST00000288050 LMNTD2Q8IXW0 634 aa11.38□□□□□ -0.59
PDPR-201ENST00000288050 TTC12Q9H892 705 aaPredicted RBP11.38□□□□□ -0.59
PDPR-201ENST00000288050 RSPH14Q9UHP6 348 aa11.38□□□□□ -0.59
PDPR-201ENST00000288050 SF3B2Q13435 895 aaKnown RBP11.38□□□□□ -0.59
PDPR-201ENST00000288050 LRRC43Q8N309 656 aa11.38□□□□□ -0.59
PDPR-201ENST00000288050 TSPYL4Q9UJ04 414 aa11.38□□□□□ -0.59
PDPR-201ENST00000288050 KIF21BO75037 1637 aa11.38□□□□□ -0.59
PDPR-201ENST00000288050 CACYBPQ9HB71 228 aaKnown RBP11.38□□□□□ -0.59
PDPR-201ENST00000288050 TOP1P11387 765 aaKnown RBP11.37□□□□□ -0.59
PDPR-201ENST00000288050 GBP1P32455 592 aa11.37□□□□□ -0.59
PDPR-201ENST00000288050 IFI16Q16666 785 aaKnown RBP11.37□□□□□ -0.59
PDPR-201ENST00000288050 RUFY3Q7L099 469 aa11.37□□□□□ -0.59
PDPR-201ENST00000288050 MICALL1Q8N3F8 863 aa11.37□□□□□ -0.59
PDPR-201ENST00000288050 TRIM7Q9C029 511 aa11.37□□□□□ -0.59
PDPR-201ENST00000288050 JADE2Q9NQC1 790 aa11.37□□□□□ -0.59
PDPR-201ENST00000288050 SEC63Q9UGP8 760 aaKnown RBP11.37□□□□□ -0.59
PDPR-201ENST00000288050 MAP3K11Q16584 847 aa11.37□□□□□ -0.59
PDPR-201ENST00000288050 TDRD12Q587J7 1177 aaKnown RBP11.37□□□□□ -0.59
PDPR-201ENST00000288050 MIER3Q7Z3K6 550 aa11.37□□□□□ -0.59
PDPR-201ENST00000288050 ZMYND15Q9H091 742 aa11.37□□□□□ -0.59
PDPR-201ENST00000288050 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.37□□□□□ -0.59
PDPR-201ENST00000288050 CLIP2Q9UDT6 1046 aa11.37□□□□□ -0.59
PDPR-201ENST00000288050 LRSAM1Q6UWE0 723 aa11.37□□□□□ -0.59
PDPR-201ENST00000288050 ZSCAN30Q86W11 494 aa11.37□□□□□ -0.59
PDPR-201ENST00000288050 CRCPO75575 148 aa11.37□□□□□ -0.59
PDPR-201ENST00000288050 WDHD1O75717 1129 aaPredicted RBP11.37□□□□□ -0.59
PDPR-201ENST00000288050 ZNF354CQ86Y25 554 aa11.36□□□□□ -0.59
PDPR-201ENST00000288050 TACC3Q9Y6A5 838 aa11.36□□□□□ -0.59
PDPR-201ENST00000288050 ERCC6LQ2NKX8 1250 aa11.36□□□□□ -0.59
PDPR-201ENST00000288050 CCDC77Q9BR77 488 aa11.36□□□□□ -0.59
PDPR-201ENST00000288050 NESP48681 1621 aa11.36□□□□□ -0.59
PDPR-201ENST00000288050 INPP1P49441 399 aa11.36□□□□□ -0.59
PDPR-201ENST00000288050 LNPKQ9C0E8 428 aa11.36□□□□□ -0.59
PDPR-201ENST00000288050 UBA5Q9GZZ9 404 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms