RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 TMEM132EQ6IEE7 984 aa4.71□□□□□ -1.65
SCN3A-201ENST00000283254 CCDC174Q6PII3 467 aa4.71□□□□□ -1.65
SCN3A-201ENST00000283254 KIF1BPQ96EK5 621 aa4.71□□□□□ -1.65
SCN3A-201ENST00000283254 UTP14AQ9BVJ6 771 aaKnown RBP4.71□□□□□ -1.65
SCN3A-201ENST00000283254 POTEB2H3BUK9 544 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 PPP2R1AP30153 589 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 CADPS2Q86UW7 1296 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 FMNL3Q8IVF7 1028 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 MSANTD4Q8NCY6 345 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 NAA15Q9BXJ9 866 aaKnown RBP4.71□□□□□ -1.66
SCN3A-201ENST00000283254 IKBKGQ9Y6K9 419 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 CFAP70Q5T0N1 1121 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 CATIPQ7Z7H3 387 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 TTC12Q9H892 705 aaPredicted RBP4.71□□□□□ -1.66
SCN3A-201ENST00000283254 TCP11L1Q9NUJ3 509 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 USO1O60763 962 aaKnown RBP4.71□□□□□ -1.66
SCN3A-201ENST00000283254 PRPHP41219 470 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 LRSAM1Q6UWE0 723 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 CABP1Q9NZU7 370 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 HDAC9Q9UKV0 1011 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 AQRO60306 1485 aaKnown RBP eCLIP4.71□□□□□ -1.66
SCN3A-201ENST00000283254 MACROD2A1Z1Q3 448 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 MX1P20591 662 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 CCDC117Q8IWD4 279 aaPredicted RBP4.71□□□□□ -1.66
SCN3A-201ENST00000283254 DYDC1Q8WWB3 177 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 FAM107BQ9H098 131 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 AKNAQ7Z591 1439 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 ERBINQ96RT1 1412 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 FSD2A1L4K1 749 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 GOLGA6L9A6NEM1 432 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 YEATS4O95619 227 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 EXOSC9Q06265 439 aaKnown RBP4.71□□□□□ -1.66
SCN3A-201ENST00000283254 CACNA2D4Q7Z3S7 1137 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 OGFOD1Q8N543 542 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 SLC12A7Q9Y666 1083 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 CTAGE5O15320 804 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 NEMFO60524 1076 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 PLCG2P16885 1265 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 PIP4K2BP78356 416 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 ST5P78524 1137 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 RNF214Q8ND24 703 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 IMPG2Q9BZV3 1241 aa4.71□□□□□ -1.66
SCN3A-201ENST00000283254 SLU7O95391 586 aaKnown RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 NCBP1Q09161 790 aaKnown RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 BICDL1Q6ZP65 573 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 PPP1R42Q7Z4L9 355 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 DHX37Q8IY37 1157 aaKnown RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 BCL11BQ9C0K0 894 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 DHX29Q7Z478 1369 aaKnown RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 SMARCC1Q92922 1105 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 SHTN1A0MZ66 631 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 KIF5CO60282 957 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 MVPQ14764 893 aaKnown RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 MAP3K11Q16584 847 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 CFAP100Q494V2 611 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 CALML4Q96GE6 196 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 DBF4Q9UBU7 674 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 POLD1P28340 1107 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 DDX46Q7L014 1031 aaKnown RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 ADAMTS8Q9UP79 889 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 MYL6BP14649 208 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 CASTP20810 708 aaKnown RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 BRDTQ58F21 947 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 C6orf163Q5TEZ5 329 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 SPECC1LQ69YQ0 1117 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 UBXN4Q92575 508 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 FAM135AQ9P2D6 1515 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 K7ELQ4 463 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 NFE2L2Q16236 605 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 IFI16Q16666 785 aaKnown RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 TAF3Q5VWG9 929 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 ZNF444Q8N0Y2 327 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 JAKMIP1Q96N16 626 aaKnown RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 TRMT112Q9UI30 125 aaKnown RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 CEBPZQ03701 1054 aaKnown RBP4.7□□□□□ -1.66
SCN3A-201ENST00000283254 CCDC14Q49A88 953 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 CCDC171Q6TFL3 1326 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 RAD54L2Q9Y4B4 1467 aa4.7□□□□□ -1.66
SCN3A-201ENST00000283254 UBA5Q9GZZ9 404 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 CAMSAP2Q08AD1 1489 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 EXOC5O00471 708 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 PAFAH1B1P43034 410 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 SPAG1Q07617 926 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 IFFO1Q0D2I5 559 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 KANK3Q6NY19 840 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 RAB3IL1Q8TBN0 382 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 DDX11Q96FC9 970 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 HMG20BQ9P0W2 317 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 CLIP2Q9UDT6 1046 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 PRPF40AO75400 957 aaKnown RBP4.69□□□□□ -1.66
SCN3A-201ENST00000283254 CCDC175P0C221 793 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 ALDH1L2Q3SY69 923 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 NBPF6Q5VWK0 638 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 NBPF5PQ86XG9 351 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-201ENST00000283254 JDP2Q8WYK2 163 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 HOOK2Q96ED9 719 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 NBPF4Q96M43 638 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 SH2D4AQ9H788 454 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 C6orf229H3BNL8 230 aa4.69□□□□□ -1.66
SCN3A-201ENST00000283254 POLR3GO15318 223 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms