RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 CCDC174Q6PII3 467 aa15.29■□□□□ 0.04
PRDM16-201ENST00000270722 PLCD3Q8N3E9 789 aa15.29■□□□□ 0.04
PRDM16-201ENST00000270722 DDX54Q8TDD1 881 aaKnown RBP15.29■□□□□ 0.04
PRDM16-201ENST00000270722 USH1CQ9Y6N9 552 aa15.29■□□□□ 0.04
PRDM16-201ENST00000270722 NOL3O60936 208 aaKnown RBP15.29■□□□□ 0.04
PRDM16-201ENST00000270722 A0A087WZG4 1122 aa15.29■□□□□ 0.04
PRDM16-201ENST00000270722 NUTM2BA6NNL0 878 aaPredicted RBP15.29■□□□□ 0.04
PRDM16-201ENST00000270722 NUTM2EB1AL46 878 aaPredicted RBP15.29■□□□□ 0.04
PRDM16-201ENST00000270722 KANK4Q5T7N3 995 aaPredicted RBP15.29■□□□□ 0.04
PRDM16-201ENST00000270722 NUTM2AQ8IVF1 878 aaPredicted RBP15.29■□□□□ 0.04
PRDM16-201ENST00000270722 TEX13AQ9BXU3 409 aaPredicted RBP15.29■□□□□ 0.04
PRDM16-201ENST00000270722 POLR3DP05423 398 aaPredicted RBP15.29■□□□□ 0.04
PRDM16-201ENST00000270722 NCBP1Q09161 790 aaKnown RBP15.29■□□□□ 0.04
PRDM16-201ENST00000270722 TWISTNBQ3B726 338 aaPredicted RBP15.29■□□□□ 0.04
PRDM16-201ENST00000270722 ZSCAN30Q86W11 494 aa15.29■□□□□ 0.04
PRDM16-201ENST00000270722 SPTY2D1Q68D10 685 aaPredicted RBP15.29■□□□□ 0.04
PRDM16-201ENST00000270722 RPGRIP1LQ68CZ1 1315 aa15.29■□□□□ 0.04
PRDM16-201ENST00000270722 KIF5BP33176 963 aa15.29■□□□□ 0.04
PRDM16-201ENST00000270722 CBX1P83916 185 aa15.29■□□□□ 0.04
PRDM16-201ENST00000270722 FKBP4Q02790 459 aaKnown RBP eCLIP15.29■□□□□ 0.04
PRDM16-201ENST00000270722 MAP3K12Q12852 859 aa15.28■□□□□ 0.04
PRDM16-201ENST00000270722 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.28■□□□□ 0.04
PRDM16-201ENST00000270722 MAP3K9P80192 1104 aa15.28■□□□□ 0.04
PRDM16-201ENST00000270722 LARP1Q6PKG0 1096 aaKnown RBP15.28■□□□□ 0.04
PRDM16-201ENST00000270722 APBB1IPQ7Z5R6 666 aaPredicted RBP15.28■□□□□ 0.04
PRDM16-201ENST00000270722 PRDM10Q9NQV6 1147 aa15.28■□□□□ 0.04
PRDM16-201ENST00000270722 MCM5P33992 734 aa15.28■□□□□ 0.04
PRDM16-201ENST00000270722 PDE3AQ14432 1141 aa15.28■□□□□ 0.04
PRDM16-201ENST00000270722 NAA15Q9BXJ9 866 aaKnown RBP15.28■□□□□ 0.04
PRDM16-201ENST00000270722 A0A1B0GUL7 405 aa15.28■□□□□ 0.04
PRDM16-201ENST00000270722 HLA-DOAP06340 250 aa15.28■□□□□ 0.04
PRDM16-201ENST00000270722 BAG3O95817 575 aa15.28■□□□□ 0.04
PRDM16-201ENST00000270722 BMS1Q14692 1282 aaKnown RBP15.28■□□□□ 0.04
PRDM16-201ENST00000270722 AMOTQ4VCS5 1084 aa15.28■□□□□ 0.04
PRDM16-201ENST00000270722 ANKRD30BQ9BXX2 1392 aa15.27■□□□□ 0.04
PRDM16-201ENST00000270722 TTC12Q9H892 705 aaPredicted RBP15.27■□□□□ 0.04
PRDM16-201ENST00000270722 LIMCH1Q9UPQ0 1083 aa15.27■□□□□ 0.04
PRDM16-201ENST00000270722 LARP1BQ659C4 914 aaKnown RBP15.27■□□□□ 0.03
PRDM16-201ENST00000270722 DHX37Q8IY37 1157 aaKnown RBP15.27■□□□□ 0.03
PRDM16-201ENST00000270722 CCDC178Q5BJE1 867 aa15.27■□□□□ 0.03
PRDM16-201ENST00000270722 RNF214Q8ND24 703 aa15.27■□□□□ 0.03
PRDM16-201ENST00000270722 ANKRD50Q9ULJ7 1429 aa15.27■□□□□ 0.03
PRDM16-201ENST00000270722 CCDC14Q49A88 953 aa15.26■□□□□ 0.03
PRDM16-201ENST00000270722 USO1O60763 962 aaKnown RBP15.26■□□□□ 0.03
PRDM16-201ENST00000270722 CABP5Q9NP86 173 aa15.26■□□□□ 0.03
PRDM16-201ENST00000270722 FSD2A1L4K1 749 aa15.26■□□□□ 0.03
PRDM16-201ENST00000270722 ZSCAN12O43309 604 aa15.26■□□□□ 0.03
PRDM16-201ENST00000270722 CACNA2D4Q7Z3S7 1137 aa15.26■□□□□ 0.03
PRDM16-201ENST00000270722 CHMP2AO43633 222 aa15.26■□□□□ 0.03
PRDM16-201ENST00000270722 UIMC1Q96RL1 719 aa15.26■□□□□ 0.03
PRDM16-201ENST00000270722 SKIDA1Q1XH10 827 aa15.26■□□□□ 0.03
PRDM16-201ENST00000270722 CCDC38Q502W7 563 aa15.26■□□□□ 0.03
PRDM16-201ENST00000270722 FILIP1Q7Z7B0 1213 aa15.26■□□□□ 0.03
PRDM16-201ENST00000270722 TMOD3Q9NYL9 352 aa15.26■□□□□ 0.03
PRDM16-201ENST00000270722 CCDC117Q8IWD4 279 aaPredicted RBP15.26■□□□□ 0.03
PRDM16-201ENST00000270722 C16orf71Q8IYS4 520 aaPredicted RBP15.25■□□□□ 0.03
PRDM16-201ENST00000270722 ZNF444Q8N0Y2 327 aaPredicted RBP15.25■□□□□ 0.03
PRDM16-201ENST00000270722 RAB3IL1Q8TBN0 382 aa15.25■□□□□ 0.03
PRDM16-201ENST00000270722 SATB2Q9UPW6 733 aa15.25■□□□□ 0.03
PRDM16-201ENST00000270722 FIBPO43427 364 aa15.25■□□□□ 0.03
PRDM16-201ENST00000270722 RNF8O76064 485 aa15.25■□□□□ 0.03
PRDM16-201ENST00000270722 KRT222Q8N1A0 295 aa15.25■□□□□ 0.03
PRDM16-201ENST00000270722 KIAA1524Q8TCG1 905 aa15.25■□□□□ 0.03
PRDM16-201ENST00000270722 UPF3BQ9BZI7 483 aaKnown RBP15.25■□□□□ 0.03
PRDM16-201ENST00000270722 IKBKGQ9Y6K9 419 aa15.25■□□□□ 0.03
PRDM16-201ENST00000270722 RGS22Q8NE09 1264 aa15.25■□□□□ 0.03
PRDM16-201ENST00000270722 ZC4H2Q9NQZ6 224 aa15.25■□□□□ 0.03
PRDM16-201ENST00000270722 SMC6Q96SB8 1091 aa15.24■□□□□ 0.03
PRDM16-201ENST00000270722 IFI16Q16666 785 aaKnown RBP15.24■□□□□ 0.03
PRDM16-201ENST00000270722 NUTM2GQ5VZR2 741 aa15.24■□□□□ 0.03
PRDM16-201ENST00000270722 CASTP20810 708 aaKnown RBP15.24■□□□□ 0.03
PRDM16-201ENST00000270722 ANKS4BQ8N8V4 417 aa15.24■□□□□ 0.03
PRDM16-201ENST00000270722 NAPBQ9H115 298 aa15.24■□□□□ 0.03
PRDM16-201ENST00000270722 BTBD11A6QL63 1104 aa15.24■□□□□ 0.03
PRDM16-201ENST00000270722 UBXN4Q92575 508 aa15.24■□□□□ 0.03
PRDM16-201ENST00000270722 RAB11FIP3O75154 756 aa15.24■□□□□ 0.03
PRDM16-201ENST00000270722 SLC5A1P13866 664 aa15.24■□□□□ 0.03
PRDM16-201ENST00000270722 PDCD7Q8N8D1 485 aaKnown RBP15.24■□□□□ 0.03
PRDM16-201ENST00000270722 PRKAR2BP31323 418 aa15.23■□□□□ 0.03
PRDM16-201ENST00000270722 ERMNQ8TAM6 284 aa15.23■□□□□ 0.03
PRDM16-201ENST00000270722 SPATA32Q96LK8 384 aa15.23■□□□□ 0.03
PRDM16-201ENST00000270722 PRIMPOLQ96LW4 560 aa15.23■□□□□ 0.03
PRDM16-201ENST00000270722 ABCF2Q9UG63 623 aa15.23■□□□□ 0.03
PRDM16-201ENST00000270722 MYO15BQ96JP2 1530 aa15.23■□□□□ 0.03
PRDM16-201ENST00000270722 TACC1O75410 805 aa15.23■□□□□ 0.03
PRDM16-201ENST00000270722 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
PRDM16-201ENST00000270722 PAFAH1B1P43034 410 aa15.23■□□□□ 0.03
PRDM16-201ENST00000270722 METTL24Q5JXM2 366 aa15.23■□□□□ 0.03
PRDM16-201ENST00000270722 RABGAP1Q9Y3P9 1069 aa15.23■□□□□ 0.03
PRDM16-201ENST00000270722 CDC5LQ99459 802 aaKnown RBP15.23■□□□□ 0.03
PRDM16-201ENST00000270722 GGNBP2Q9H3C7 697 aa15.23■□□□□ 0.03
PRDM16-201ENST00000270722 TRIM35Q9UPQ4 493 aa15.23■□□□□ 0.03
PRDM16-201ENST00000270722 TTF1Q15361 905 aaPredicted RBP15.23■□□□□ 0.03
PRDM16-201ENST00000270722 MRPS9P82933 396 aaKnown RBP15.22■□□□□ 0.03
PRDM16-201ENST00000270722 AACSQ86V21 672 aa15.22■□□□□ 0.03
PRDM16-201ENST00000270722 RTEL1-TNFRSF6BF6WH68 1400 aa15.22■□□□□ 0.03
PRDM16-201ENST00000270722 ZGPATQ8N5A5 531 aaKnown RBP15.22■□□□□ 0.03
PRDM16-201ENST00000270722 KIF21BO75037 1637 aa15.22■□□□□ 0.03
PRDM16-201ENST00000270722 IDH1O75874 414 aaKnown RBP15.22■□□□□ 0.03
PRDM16-201ENST00000270722 TCP11L1Q9NUJ3 509 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms