RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 KIF1AQ12756 1690 aa10.75□□□□□ -0.69
CALCOCO2-201ENST00000258947 CEMIPQ8WUJ3 1361 aa10.75□□□□□ -0.69
CALCOCO2-201ENST00000258947 ATP5J2-PTCD1G3V325 749 aa10.75□□□□□ -0.69
CALCOCO2-201ENST00000258947 EXOC5O00471 708 aa10.75□□□□□ -0.69
CALCOCO2-201ENST00000258947 NBPF7P0C2Y1 421 aaPredicted RBP10.75□□□□□ -0.69
CALCOCO2-201ENST00000258947 PPP1R42Q7Z4L9 355 aa10.75□□□□□ -0.69
CALCOCO2-201ENST00000258947 DCTPP1Q9H773 170 aa10.75□□□□□ -0.69
CALCOCO2-201ENST00000258947 HDAC5Q9UQL6 1122 aa10.75□□□□□ -0.69
CALCOCO2-201ENST00000258947 SOS1Q07889 1333 aaPredicted RBP10.75□□□□□ -0.69
CALCOCO2-201ENST00000258947 C22orf23Q9BZE7 217 aa10.74□□□□□ -0.69
CALCOCO2-201ENST00000258947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.74□□□□□ -0.693e-7■■■■□ 24.7
CALCOCO2-201ENST00000258947 PNMA6EA0A0J9YXQ4 647 aa10.74□□□□□ -0.69
CALCOCO2-201ENST00000258947 KSR2Q6VAB6 950 aa10.74□□□□□ -0.69
CALCOCO2-201ENST00000258947 OTUD7AQ8TE49 926 aaPredicted RBP10.74□□□□□ -0.69
CALCOCO2-201ENST00000258947 SIL1Q9H173 461 aa10.74□□□□□ -0.69
CALCOCO2-201ENST00000258947 DDX21Q9NR30 783 aaKnown RBP eCLIP10.74□□□□□ -0.69
CALCOCO2-201ENST00000258947 CARD10Q9BWT7 1032 aa10.74□□□□□ -0.69
CALCOCO2-201ENST00000258947 USP44Q9H0E7 712 aa10.73□□□□□ -0.69
CALCOCO2-201ENST00000258947 NGLY1Q96IV0 654 aa10.73□□□□□ -0.69
CALCOCO2-201ENST00000258947 ZBTB3Q9H5J0 574 aa10.73□□□□□ -0.69
CALCOCO2-201ENST00000258947 MEGF6O75095 1541 aa10.73□□□□□ -0.69
CALCOCO2-201ENST00000258947 ANKRD13DQ6ZTN6 518 aa10.73□□□□□ -0.69
CALCOCO2-201ENST00000258947 NUTM1Q86Y26 1132 aa10.72□□□□□ -0.69
CALCOCO2-201ENST00000258947 C8orf37Q96NL8 207 aa10.72□□□□□ -0.69
CALCOCO2-201ENST00000258947 ACSBG1Q96GR2 724 aa10.72□□□□□ -0.69
CALCOCO2-201ENST00000258947 CDC45O75419 566 aa10.72□□□□□ -0.69
CALCOCO2-201ENST00000258947 MEX3CQ5U5Q3 659 aaKnown RBP10.72□□□□□ -0.69
CALCOCO2-201ENST00000258947 SLIT3O75094 1523 aa10.71□□□□□ -0.69
CALCOCO2-201ENST00000258947 MED1Q15648 1581 aaPredicted RBP10.71□□□□□ -0.69
CALCOCO2-201ENST00000258947 MAP4K4O95819 1239 aaPredicted RBP10.71□□□□□ -0.69
CALCOCO2-201ENST00000258947 ATP8B2P98198 1209 aa10.71□□□□□ -0.69
CALCOCO2-201ENST00000258947 G3BP1Q13283 466 aaKnown RBP eCLIP10.71□□□□□ -0.697e-6■□□□□ 8.9
CALCOCO2-201ENST00000258947 A1BGP04217 495 aa10.71□□□□□ -0.69
CALCOCO2-201ENST00000258947 NCAPD2Q15021 1401 aa10.71□□□□□ -0.7
CALCOCO2-201ENST00000258947 BMP2KLQ5H9B9 411 aa10.71□□□□□ -0.7
CALCOCO2-201ENST00000258947 UBE3BQ7Z3V4 1068 aa10.71□□□□□ -0.7
CALCOCO2-201ENST00000258947 CPDO75976 1380 aa10.71□□□□□ -0.7
CALCOCO2-201ENST00000258947 STRCP1A6NGW2 1772 aa10.7□□□□□ -0.7
CALCOCO2-201ENST00000258947 RGPD1P0DJD0 1748 aa10.7□□□□□ -0.7
CALCOCO2-201ENST00000258947 BEND3Q5T5X7 828 aa10.7□□□□□ -0.7
CALCOCO2-201ENST00000258947 HSCBQ8IWL3 235 aa10.7□□□□□ -0.7
CALCOCO2-201ENST00000258947 IFIT2P09913 472 aaKnown RBP10.7□□□□□ -0.7
CALCOCO2-201ENST00000258947 PLEKHM2Q8IWE5 1019 aa10.7□□□□□ -0.7
CALCOCO2-201ENST00000258947 LINS1Q8NG48 757 aa10.7□□□□□ -0.7
CALCOCO2-201ENST00000258947 A0A087WZG4 1122 aa10.7□□□□□ -0.7
CALCOCO2-201ENST00000258947 GRM8O00222 908 aa10.7□□□□□ -0.7
CALCOCO2-201ENST00000258947 DDB1Q16531 1140 aa10.7□□□□□ -0.7
CALCOCO2-201ENST00000258947 PA2G4Q9UQ80 394 aaKnown RBP10.7□□□□□ -0.7
CALCOCO2-201ENST00000258947 FAM177BA6PVY3 158 aa10.69□□□□□ -0.7
CALCOCO2-201ENST00000258947 CLASRPQ8N2M8 674 aaKnown RBP10.69□□□□□ -0.7
CALCOCO2-201ENST00000258947 CCDC85AQ96PX6 553 aaPredicted RBP10.69□□□□□ -0.7
CALCOCO2-201ENST00000258947 MX1P20591 662 aa10.69□□□□□ -0.7
CALCOCO2-201ENST00000258947 HSP90AB4PQ58FF6 505 aa10.69□□□□□ -0.7
CALCOCO2-201ENST00000258947 TBC1D9Q6ZT07 1266 aa10.69□□□□□ -0.7
CALCOCO2-201ENST00000258947 RGPD2P0DJD1 1756 aa10.69□□□□□ -0.7
CALCOCO2-201ENST00000258947 ALDH1L1O75891 902 aa10.68□□□□□ -0.7
CALCOCO2-201ENST00000258947 FOXD4L1Q9NU39 408 aa10.68□□□□□ -0.7
CALCOCO2-201ENST00000258947 ASAP1Q9ULH1 1129 aa10.68□□□□□ -0.7
CALCOCO2-201ENST00000258947 ERVV-2B6SEH9 535 aa10.68□□□□□ -0.7
CALCOCO2-201ENST00000258947 STARD3NLO95772 234 aa10.68□□□□□ -0.7
CALCOCO2-201ENST00000258947 TAF7LQ5H9L4 462 aa10.68□□□□□ -0.7
CALCOCO2-201ENST00000258947 TTC22Q5TAA0 569 aa10.68□□□□□ -0.7
CALCOCO2-201ENST00000258947 KIF6Q6ZMV9 814 aa10.68□□□□□ -0.7
CALCOCO2-201ENST00000258947 RGS12O14924 1447 aa10.68□□□□□ -0.7
CALCOCO2-201ENST00000258947 GPATCH3Q96I76 525 aa10.68□□□□□ -0.7
CALCOCO2-201ENST00000258947 KDM6AO15550 1401 aaPredicted RBP10.67□□□□□ -0.7
CALCOCO2-201ENST00000258947 PRIM1P49642 420 aaKnown RBP10.67□□□□□ -0.7
CALCOCO2-201ENST00000258947 KIF1BPQ96EK5 621 aa10.67□□□□□ -0.7
CALCOCO2-201ENST00000258947 DNAJC10Q8IXB1 793 aa10.67□□□□□ -0.7
CALCOCO2-201ENST00000258947 RHPN1Q8TCX5 695 aa10.67□□□□□ -0.7
CALCOCO2-201ENST00000258947 BICC1Q9H694 974 aaKnown RBP10.67□□□□□ -0.7
CALCOCO2-201ENST00000258947 SDSP20132 328 aa10.66□□□□□ -0.7
CALCOCO2-201ENST00000258947 PDE1AP54750 535 aa10.66□□□□□ -0.7
CALCOCO2-201ENST00000258947 KLHDC4Q8TBB5 520 aa10.66□□□□□ -0.7
CALCOCO2-201ENST00000258947 ANO2Q9NQ90 1003 aa10.66□□□□□ -0.7
CALCOCO2-201ENST00000258947 GPTP24298 496 aa10.66□□□□□ -0.7
CALCOCO2-201ENST00000258947 TTLL7Q6ZT98 887 aa10.66□□□□□ -0.7
CALCOCO2-201ENST00000258947 AACSQ86V21 672 aa10.66□□□□□ -0.7
CALCOCO2-201ENST00000258947 TBC1D32Q96NH3 1257 aa10.66□□□□□ -0.7
CALCOCO2-201ENST00000258947 CAMTA1Q9Y6Y1 1673 aa10.66□□□□□ -0.7
CALCOCO2-201ENST00000258947 SUCLG2Q96I99 432 aa10.66□□□□□ -0.7
CALCOCO2-201ENST00000258947 COL5A2P05997 1499 aaPredicted RBP10.66□□□□□ -0.7
CALCOCO2-201ENST00000258947 ADCY9O60503 1353 aa10.65□□□□□ -0.7
CALCOCO2-201ENST00000258947 FAM98CQ17RN3 349 aaKnown RBP10.65□□□□□ -0.7
CALCOCO2-201ENST00000258947 METTL22Q9BUU2 404 aaPredicted RBP10.65□□□□□ -0.7
CALCOCO2-201ENST00000258947 EIF5BO60841 1220 aaKnown RBP10.65□□□□□ -0.7
CALCOCO2-201ENST00000258947 GSPT1P15170 499 aaKnown RBP10.65□□□□□ -0.7
CALCOCO2-201ENST00000258947 KCNJ4P48050 445 aa10.65□□□□□ -0.7
CALCOCO2-201ENST00000258947 PIGBQ92521 554 aa10.65□□□□□ -0.7
CALCOCO2-201ENST00000258947 TRPM3Q9HCF6 1732 aaPredicted RBP10.65□□□□□ -0.7
CALCOCO2-201ENST00000258947 STRCQ7RTU9 1775 aa10.65□□□□□ -0.7
CALCOCO2-201ENST00000258947 RGPD5Q99666 1765 aa10.65□□□□□ -0.7
CALCOCO2-201ENST00000258947 NOL8Q76FK4 1167 aaKnown RBP10.65□□□□□ -0.7
CALCOCO2-201ENST00000258947 CCDC8Q9H0W5 538 aaPredicted RBP10.65□□□□□ -0.7
CALCOCO2-201ENST00000258947 MARF1Q9Y4F3 1742 aaKnown RBP10.64□□□□□ -0.71
CALCOCO2-201ENST00000258947 ATP10DQ9P241 1426 aa10.64□□□□□ -0.71
CALCOCO2-201ENST00000258947 NEURL1BA8MQ27 555 aa10.64□□□□□ -0.71
CALCOCO2-201ENST00000258947 RAB11FIP3O75154 756 aa10.64□□□□□ -0.71
CALCOCO2-201ENST00000258947 REC8O95072 547 aa10.64□□□□□ -0.71
CALCOCO2-201ENST00000258947 NEUROD6Q96NK8 337 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms