RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 TMOD3Q9NYL9 352 aa12.02□□□□□ -0.49
NIP7-202ENST00000254941 KCPQ6ZWJ8 1503 aa12.01□□□□□ -0.49
NIP7-202ENST00000254941 PRAMEF22A3QJZ6 481 aa12.01□□□□□ -0.49
NIP7-202ENST00000254941 SNRPA1P09661 255 aaKnown RBP12.01□□□□□ -0.49
NIP7-202ENST00000254941 DBF4Q9UBU7 674 aaPredicted RBP12.01□□□□□ -0.49
NIP7-202ENST00000254941 THSD7AQ9UPZ6 1657 aa12.01□□□□□ -0.49
NIP7-202ENST00000254941 FAM98CQ17RN3 349 aaKnown RBP12□□□□□ -0.49
NIP7-202ENST00000254941 INTS3Q68E01 1043 aaKnown RBP12□□□□□ -0.49
NIP7-202ENST00000254941 CHPF2Q9P2E5 772 aa12□□□□□ -0.49
NIP7-202ENST00000254941 AFF2P51816 1311 aa12□□□□□ -0.49
NIP7-202ENST00000254941 BCL9O00512 1426 aa12□□□□□ -0.49
NIP7-202ENST00000254941 MARCH10Q8NA82 808 aaPredicted RBP12□□□□□ -0.49
NIP7-202ENST00000254941 PIGBQ92521 554 aa12□□□□□ -0.49
NIP7-202ENST00000254941 ZBTB40Q9NUA8 1239 aa12□□□□□ -0.49
NIP7-202ENST00000254941 ZBTB7BO15156 539 aaPredicted RBP11.99□□□□□ -0.49
NIP7-202ENST00000254941 FKBP5Q13451 457 aaPredicted RBP11.99□□□□□ -0.49
NIP7-202ENST00000254941 CHMP4BQ9H444 224 aaKnown RBP11.99□□□□□ -0.49
NIP7-202ENST00000254941 ATRNO75882 1429 aa11.99□□□□□ -0.49
NIP7-202ENST00000254941 GJD4Q96KN9 370 aaPredicted RBP11.98□□□□□ -0.49
NIP7-202ENST00000254941 PHAXQ9H814 394 aaKnown RBP11.98□□□□□ -0.49
NIP7-202ENST00000254941 KDM2BQ8NHM5 1336 aa11.98□□□□□ -0.49
NIP7-202ENST00000254941 DDX21Q9NR30 783 aaKnown RBP eCLIP11.97□□□□□ -0.49
NIP7-202ENST00000254941 HYPKQ9NX55 129 aa11.97□□□□□ -0.49
NIP7-202ENST00000254941 PCDHB15Q9Y5E8 787 aa11.97□□□□□ -0.49
NIP7-202ENST00000254941 PXDNLA1KZ92 1463 aa11.97□□□□□ -0.49
NIP7-202ENST00000254941 F6X3S4 739 aa11.97□□□□□ -0.49
NIP7-202ENST00000254941 PDIA6Q15084 440 aa11.97□□□□□ -0.49
NIP7-202ENST00000254941 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
NIP7-202ENST00000254941 ATG3Q9NT62 314 aa11.97□□□□□ -0.49
NIP7-202ENST00000254941 TRPC5Q9UL62 973 aaPredicted RBP11.97□□□□□ -0.49
NIP7-202ENST00000254941 ASAP1Q9ULH1 1129 aa11.97□□□□□ -0.49
NIP7-202ENST00000254941 USP16Q9Y5T5 823 aa11.97□□□□□ -0.49
NIP7-202ENST00000254941 ONECUT3O60422 494 aaPredicted RBP11.96□□□□□ -0.49
NIP7-202ENST00000254941 PTCD1O75127 700 aaKnown RBP11.96□□□□□ -0.49
NIP7-202ENST00000254941 PRIM1P49642 420 aaKnown RBP11.96□□□□□ -0.49
NIP7-202ENST00000254941 CCT4P50991 539 aaKnown RBP11.96□□□□□ -0.49
NIP7-202ENST00000254941 PROSER3Q2NL68 480 aa11.96□□□□□ -0.49
NIP7-202ENST00000254941 CENPQQ7L2Z9 268 aaPredicted RBP11.96□□□□□ -0.49
NIP7-202ENST00000254941 ANXA1P04083 346 aa11.95□□□□□ -0.5
NIP7-202ENST00000254941 VSIG10Q8N0Z9 540 aa11.95□□□□□ -0.5
NIP7-202ENST00000254941 SLC4A10Q6U841 1118 aa11.95□□□□□ -0.5
NIP7-202ENST00000254941 SYTL4Q96C24 671 aaPredicted RBP11.95□□□□□ -0.5
NIP7-202ENST00000254941 EP400Q96L91 3159 aa11.95□□□□□ -0.5
NIP7-202ENST00000254941 ERBB4Q15303 1308 aa11.94□□□□□ -0.5
NIP7-202ENST00000254941 IGHDP01880 384 aa11.94□□□□□ -0.5
NIP7-202ENST00000254941 LRP10Q7Z4F1 713 aa11.94□□□□□ -0.5
NIP7-202ENST00000254941 SBF2Q86WG5 1849 aa11.94□□□□□ -0.5
NIP7-202ENST00000254941 ADCY9O60503 1353 aa11.94□□□□□ -0.5
NIP7-202ENST00000254941 PI4KAP2A4QPH2 592 aa11.93□□□□□ -0.5
NIP7-202ENST00000254941 PI4KAP1Q8N8J0 262 aa11.93□□□□□ -0.5
NIP7-202ENST00000254941 TEX13AQ9BXU3 409 aaPredicted RBP11.93□□□□□ -0.5
NIP7-202ENST00000254941 A0A0G2JS52 829 aa11.93□□□□□ -0.5
NIP7-202ENST00000254941 MYT1Q01538 1121 aa11.93□□□□□ -0.5
NIP7-202ENST00000254941 DNAAF4Q8WXU2 420 aa11.93□□□□□ -0.5
NIP7-202ENST00000254941 QTRT2Q9H974 415 aaKnown RBP11.93□□□□□ -0.5
NIP7-202ENST00000254941 TJP1Q07157 1748 aa11.92□□□□□ -0.5
NIP7-202ENST00000254941 DDX58O95786 925 aaKnown RBP11.92□□□□□ -0.5
NIP7-202ENST00000254941 MYL6BP14649 208 aa11.92□□□□□ -0.5
NIP7-202ENST00000254941 HDAC1Q13547 482 aaPredicted RBP11.92□□□□□ -0.5
NIP7-202ENST00000254941 KSR2Q6VAB6 950 aa11.92□□□□□ -0.5
NIP7-202ENST00000254941 ACSBG1Q96GR2 724 aa11.92□□□□□ -0.5
NIP7-202ENST00000254941 RWDD1Q9H446 243 aaPredicted RBP11.92□□□□□ -0.5
NIP7-202ENST00000254941 CICQ96RK0 1608 aaPredicted RBP11.92□□□□□ -0.5
NIP7-202ENST00000254941 ATP10DQ9P241 1426 aa11.92□□□□□ -0.5
NIP7-202ENST00000254941 ARFGEF2Q9Y6D5 1785 aa11.92□□□□□ -0.5
NIP7-202ENST00000254941 NHSQ6T4R5 1651 aa11.92□□□□□ -0.5
NIP7-202ENST00000254941 BRWD3Q6RI45 1802 aa11.91□□□□□ -0.5
NIP7-202ENST00000254941 MEIS3Q99687 375 aa11.91□□□□□ -0.5
NIP7-202ENST00000254941 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
NIP7-202ENST00000254941 NBPF26B4DH59 902 aa11.91□□□□□ -0.5
NIP7-202ENST00000254941 BEND3Q5T5X7 828 aa11.91□□□□□ -0.5
NIP7-202ENST00000254941 NBPF14Q5TI25 921 aa11.91□□□□□ -0.5
NIP7-202ENST00000254941 NBPF10Q6P3W6 841 aaKnown RBP11.91□□□□□ -0.5
NIP7-202ENST00000254941 NBPF15Q8N660 670 aa11.91□□□□□ -0.5
NIP7-202ENST00000254941 SLC4A9Q96Q91 983 aa11.91□□□□□ -0.5
NIP7-202ENST00000254941 RBM42Q9BTD8 480 aaKnown RBP11.91□□□□□ -0.5
NIP7-202ENST00000254941 MAP3K2Q9Y2U5 619 aa11.91□□□□□ -0.5
NIP7-202ENST00000254941 BTAF1O14981 1849 aa11.91□□□□□ -0.5
NIP7-202ENST00000254941 STARD3NLO95772 234 aa11.9□□□□□ -0.5
NIP7-202ENST00000254941 AIMP1Q12904 312 aaKnown RBP11.9□□□□□ -0.5
NIP7-202ENST00000254941 COPS6Q7L5N1 327 aa11.9□□□□□ -0.5
NIP7-202ENST00000254941 XAGE3Q8WTP9 111 aa11.9□□□□□ -0.5
NIP7-202ENST00000254941 SRCIN1Q9C0H9 1055 aa11.9□□□□□ -0.5
NIP7-202ENST00000254941 NUP188Q5SRE5 1749 aa11.9□□□□□ -0.5
NIP7-202ENST00000254941 AFDNP55196 1824 aaKnown RBP11.9□□□□□ -0.51
NIP7-202ENST00000254941 KCNQ2O43526 872 aa11.89□□□□□ -0.51
NIP7-202ENST00000254941 A1BGP04217 495 aa11.89□□□□□ -0.51
NIP7-202ENST00000254941 PIP4K2AP48426 406 aaPredicted RBP11.89□□□□□ -0.51
NIP7-202ENST00000254941 ANKRD13DQ6ZTN6 518 aa11.89□□□□□ -0.51
NIP7-202ENST00000254941 DNAJC10Q8IXB1 793 aa11.89□□□□□ -0.51
NIP7-202ENST00000254941 SEPT12Q8IYM1 358 aa11.89□□□□□ -0.51
NIP7-202ENST00000254941 C1orf115Q9H7X2 142 aa11.89□□□□□ -0.51
NIP7-202ENST00000254941 GNAI3P08754 354 aa11.89□□□□□ -0.51
NIP7-202ENST00000254941 ZNF772Q68DY9 489 aaPredicted RBP11.89□□□□□ -0.51
NIP7-202ENST00000254941 USP44Q9H0E7 712 aa11.89□□□□□ -0.51
NIP7-202ENST00000254941 IBTKQ9P2D0 1353 aaPredicted RBP11.89□□□□□ -0.51
NIP7-202ENST00000254941 MYH14Q7Z406 1995 aaKnown RBP11.88□□□□□ -0.51
NIP7-202ENST00000254941 COL5A3P25940 1745 aaPredicted RBP11.88□□□□□ -0.51
NIP7-202ENST00000254941 NPM3O75607 178 aaKnown RBP11.88□□□□□ -0.51
NIP7-202ENST00000254941 RIC3Q7Z5B4 369 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms