RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 KDM4AO75164 1064 aa16.89■□□□□ 0.29
PCDHB3-201ENST00000231130 SLC52A1Q9NWF4 448 aa16.89■□□□□ 0.29
PCDHB3-201ENST00000231130 ABCC3O15438 1527 aa16.89■□□□□ 0.29
PCDHB3-201ENST00000231130 ASXL2Q76L83 1435 aa16.89■□□□□ 0.29
PCDHB3-201ENST00000231130 AP5Z1O43299 807 aa16.89■□□□□ 0.29
PCDHB3-201ENST00000231130 ZSCAN22P10073 491 aaPredicted RBP16.89■□□□□ 0.29
PCDHB3-201ENST00000231130 CASTP20810 708 aaKnown RBP16.89■□□□□ 0.29
PCDHB3-201ENST00000231130 OS9Q13438 667 aaPredicted RBP16.89■□□□□ 0.29
PCDHB3-201ENST00000231130 RASEFQ8IZ41 740 aa16.89■□□□□ 0.29
PCDHB3-201ENST00000231130 FAM184AQ8NB25 1140 aa16.89■□□□□ 0.29
PCDHB3-201ENST00000231130 POGZQ7Z3K3 1410 aa16.88■□□□□ 0.29
PCDHB3-201ENST00000231130 NECAB1Q8N987 351 aa16.88■□□□□ 0.29
PCDHB3-201ENST00000231130 INTS4Q96HW7 963 aaKnown RBP16.88■□□□□ 0.29
PCDHB3-201ENST00000231130 ARHGEF28Q8N1W1 1705 aaKnown RBP16.88■□□□□ 0.29
PCDHB3-201ENST00000231130 PTPRCP08575 1304 aa16.88■□□□□ 0.29
PCDHB3-201ENST00000231130 CCT4P50991 539 aaKnown RBP16.88■□□□□ 0.29
PCDHB3-201ENST00000231130 TCEANC2Q96MN5 208 aa16.88■□□□□ 0.29
PCDHB3-201ENST00000231130 LARGE1O95461 756 aa16.87■□□□□ 0.29
PCDHB3-201ENST00000231130 EIF2S2P20042 333 aaKnown RBP16.87■□□□□ 0.29
PCDHB3-201ENST00000231130 LTV1Q96GA3 475 aaPredicted RBP16.87■□□□□ 0.29
PCDHB3-201ENST00000231130 PTGS1P23219 599 aa16.87■□□□□ 0.29
PCDHB3-201ENST00000231130 GABPB1Q06547 395 aaPredicted RBP16.87■□□□□ 0.29
PCDHB3-201ENST00000231130 ARHGEF40Q8TER5 1519 aa16.86■□□□□ 0.29
PCDHB3-201ENST00000231130 GJB2P29033 226 aa16.86■□□□□ 0.29
PCDHB3-201ENST00000231130 UBE2HP62256 183 aa16.86■□□□□ 0.29
PCDHB3-201ENST00000231130 FLIIQ13045 1269 aa16.86■□□□□ 0.29
PCDHB3-201ENST00000231130 CALCOCO1Q9P1Z2 691 aa16.86■□□□□ 0.29
PCDHB3-201ENST00000231130 SLFN14P0C7P3 912 aa16.86■□□□□ 0.29
PCDHB3-201ENST00000231130 LRMPQ12912 555 aa16.86■□□□□ 0.29
PCDHB3-201ENST00000231130 LUZP1Q86V48 1076 aa16.86■□□□□ 0.29
PCDHB3-201ENST00000231130 CHMP4CQ96CF2 233 aa16.86■□□□□ 0.29
PCDHB3-201ENST00000231130 WASLO00401 505 aaPredicted RBP16.85■□□□□ 0.29
PCDHB3-201ENST00000231130 OSBPL3Q9H4L5 887 aa16.85■□□□□ 0.29
PCDHB3-201ENST00000231130 MAP2P11137 1827 aaKnown RBP16.85■□□□□ 0.29
PCDHB3-201ENST00000231130 KIDINS220Q9ULH0 1771 aa16.85■□□□□ 0.29
PCDHB3-201ENST00000231130 UBTFL1P0CB47 393 aaPredicted RBP16.85■□□□□ 0.29
PCDHB3-201ENST00000231130 NCBP1Q09161 790 aaKnown RBP16.85■□□□□ 0.29
PCDHB3-201ENST00000231130 CCDC112Q8NEF3 446 aa16.85■□□□□ 0.29
PCDHB3-201ENST00000231130 TMX1Q9H3N1 280 aa16.85■□□□□ 0.29
PCDHB3-201ENST00000231130 TFIP11Q9UBB9 837 aaKnown RBP16.85■□□□□ 0.29
PCDHB3-201ENST00000231130 GOLGA6L4A6NEF3 574 aa16.85■□□□□ 0.29
PCDHB3-201ENST00000231130 F13A1P00488 732 aa16.85■□□□□ 0.29
PCDHB3-201ENST00000231130 MTHFSDQ2M296 383 aaKnown RBP16.85■□□□□ 0.29
PCDHB3-201ENST00000231130 KCNF1Q9H3M0 494 aa16.85■□□□□ 0.29
PCDHB3-201ENST00000231130 SNX14Q9Y5W7 946 aa16.85■□□□□ 0.29
PCDHB3-201ENST00000231130 RGS12O14924 1447 aa16.84■□□□□ 0.29
PCDHB3-201ENST00000231130 GOLGA6L6A8MZA4 724 aa16.84■□□□□ 0.29
PCDHB3-201ENST00000231130 UVSSAQ2YD98 709 aa16.84■□□□□ 0.29
PCDHB3-201ENST00000231130 RUFY3Q7L099 469 aa16.84■□□□□ 0.29
PCDHB3-201ENST00000231130 JAKMIP1Q96N16 626 aaKnown RBP16.84■□□□□ 0.29
PCDHB3-201ENST00000231130 PRPF40BQ6NWY9 871 aaKnown RBP16.84■□□□□ 0.29
PCDHB3-201ENST00000231130 KRT222Q8N1A0 295 aa16.84■□□□□ 0.29
PCDHB3-201ENST00000231130 PTPRMP28827 1452 aa16.84■□□□□ 0.29
PCDHB3-201ENST00000231130 GNAI3P08754 354 aa16.83■□□□□ 0.29
PCDHB3-201ENST00000231130 ANAPC15P60006 121 aa16.83■□□□□ 0.29
PCDHB3-201ENST00000231130 TERF2Q15554 542 aa16.83■□□□□ 0.29
PCDHB3-201ENST00000231130 NUTM2GQ5VZR2 741 aa16.83■□□□□ 0.28
PCDHB3-201ENST00000231130 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
PCDHB3-201ENST00000231130 CCDC186Q7Z3E2 898 aa16.83■□□□□ 0.28
PCDHB3-201ENST00000231130 ANKRD7Q92527 254 aa16.83■□□□□ 0.28
PCDHB3-201ENST00000231130 FBXW7Q969H0 707 aa16.83■□□□□ 0.28
PCDHB3-201ENST00000231130 NRBP1Q9UHY1 535 aa16.83■□□□□ 0.28
PCDHB3-201ENST00000231130 CTNNA3Q9UI47 895 aa16.83■□□□□ 0.28
PCDHB3-201ENST00000231130 LIMCH1Q9UPQ0 1083 aa16.83■□□□□ 0.28
PCDHB3-201ENST00000231130 CCDC61Q9Y6R9 512 aa16.83■□□□□ 0.28
PCDHB3-201ENST00000231130 SRGAP3O43295 1099 aa16.83■□□□□ 0.28
PCDHB3-201ENST00000231130 TNNT1P13805 278 aa16.83■□□□□ 0.28
PCDHB3-201ENST00000231130 STK3Q13188 491 aa16.83■□□□□ 0.28
PCDHB3-201ENST00000231130 TRIM5Q9C035 493 aa16.83■□□□□ 0.28
PCDHB3-201ENST00000231130 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.83■□□□□ 0.28
PCDHB3-201ENST00000231130 NEURL4Q96JN8 1562 aa16.82■□□□□ 0.28
PCDHB3-201ENST00000231130 ARHGAP31Q2M1Z3 1444 aa16.82■□□□□ 0.28
PCDHB3-201ENST00000231130 ATP8B2P98198 1209 aa16.82■□□□□ 0.28
PCDHB3-201ENST00000231130 ANXA1P04083 346 aa16.82■□□□□ 0.28
PCDHB3-201ENST00000231130 HSPA4P34932 840 aa16.82■□□□□ 0.28
PCDHB3-201ENST00000231130 PPP1R42Q7Z4L9 355 aa16.82■□□□□ 0.28
PCDHB3-201ENST00000231130 ST7Q9NRC1 585 aa16.82■□□□□ 0.28
PCDHB3-201ENST00000231130 NEXMIFQ5QGS0 1516 aa16.82■□□□□ 0.28
PCDHB3-201ENST00000231130 FOSBP53539 338 aa16.81■□□□□ 0.28
PCDHB3-201ENST00000231130 TPD52L1Q16890 204 aaPredicted RBP16.81■□□□□ 0.28
PCDHB3-201ENST00000231130 KIAA1524Q8TCG1 905 aa16.81■□□□□ 0.28
PCDHB3-201ENST00000231130 RPAP1Q9BWH6 1393 aaPredicted RBP16.81■□□□□ 0.28
PCDHB3-201ENST00000231130 ADCK5Q3MIX3 580 aa16.81■□□□□ 0.28
PCDHB3-201ENST00000231130 PHAXQ9H814 394 aaKnown RBP16.81■□□□□ 0.28
PCDHB3-201ENST00000231130 KIF24Q5T7B8 1368 aa16.81■□□□□ 0.28
PCDHB3-201ENST00000231130 CCDC192P0DO97 292 aa16.81■□□□□ 0.28
PCDHB3-201ENST00000231130 ATP6V1DQ9Y5K8 247 aa16.81■□□□□ 0.28
PCDHB3-201ENST00000231130 CEBPZQ03701 1054 aaKnown RBP16.8■□□□□ 0.28
PCDHB3-201ENST00000231130 UHRF1BP1LA0JNW5 1464 aa16.8■□□□□ 0.28
PCDHB3-201ENST00000231130 LARP1BQ659C4 914 aaKnown RBP16.8■□□□□ 0.28
PCDHB3-201ENST00000231130 SPTLC3Q9NUV7 552 aa16.8■□□□□ 0.28
PCDHB3-201ENST00000231130 PDRG1Q9NUG6 133 aa16.8■□□□□ 0.28
PCDHB3-201ENST00000231130 DDX41Q9UJV9 622 aaKnown RBP16.8■□□□□ 0.28
PCDHB3-201ENST00000231130 LIG1P18858 919 aa16.79■□□□□ 0.28
PCDHB3-201ENST00000231130 PPFIA3O75145 1194 aa16.78■□□□□ 0.28
PCDHB3-201ENST00000231130 CAPN2P17655 700 aa16.78■□□□□ 0.28
PCDHB3-201ENST00000231130 AMPHP49418 695 aa16.78■□□□□ 0.28
PCDHB3-201ENST00000231130 RHPN1Q8TCX5 695 aa16.78■□□□□ 0.28
PCDHB3-201ENST00000231130 USP44Q9H0E7 712 aa16.78■□□□□ 0.28
PCDHB3-201ENST00000231130 PTH1RQ03431 593 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms