RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 FMNL2Q96PY5 1086 aa18.13■□□□□ 0.49
VEGFA-201ENST00000230480 BCL2L12Q9HB09 334 aa18.13■□□□□ 0.49
VEGFA-201ENST00000230480 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
VEGFA-201ENST00000230480 SRP68Q9UHB9 627 aaKnown RBP18.13■□□□□ 0.49
VEGFA-201ENST00000230480 RTCBQ9Y3I0 505 aaKnown RBP18.13■□□□□ 0.49
VEGFA-201ENST00000230480 NBPF26B4DH59 902 aa18.12■□□□□ 0.49
VEGFA-201ENST00000230480 GYS1P13807 737 aa18.12■□□□□ 0.49
VEGFA-201ENST00000230480 TRAPPC3LQ5T215 181 aa18.12■□□□□ 0.49
VEGFA-201ENST00000230480 NBPF10Q6P3W6 841 aaKnown RBP18.12■□□□□ 0.49
VEGFA-201ENST00000230480 TTC5Q8N0Z6 440 aa18.12■□□□□ 0.49
VEGFA-201ENST00000230480 NBPF15Q8N660 670 aa18.12■□□□□ 0.49
VEGFA-201ENST00000230480 CHL1O00533 1208 aa18.11■□□□□ 0.49
VEGFA-201ENST00000230480 MSH5O43196 834 aa18.11■□□□□ 0.49
VEGFA-201ENST00000230480 ZNF853P0CG23 659 aa18.11■□□□□ 0.49
VEGFA-201ENST00000230480 ARXQ96QS3 562 aa18.11■□□□□ 0.49
VEGFA-201ENST00000230480 GIGYF1O75420 1035 aaPredicted RBP18.1■□□□□ 0.49
VEGFA-201ENST00000230480 NEFMP07197 916 aa18.1■□□□□ 0.49
VEGFA-201ENST00000230480 ADRA2BP18089 450 aa18.1■□□□□ 0.49
VEGFA-201ENST00000230480 PIP4K2AP48426 406 aaPredicted RBP18.1■□□□□ 0.49
VEGFA-201ENST00000230480 SYT17Q9BSW7 474 aa18.1■□□□□ 0.49
VEGFA-201ENST00000230480 FHDC1Q9C0D6 1143 aaPredicted RBP18.1■□□□□ 0.49
VEGFA-201ENST00000230480 USP42Q9H9J4 1324 aaKnown RBP18.09■□□□□ 0.49
VEGFA-201ENST00000230480 HMGB2P26583 209 aaKnown RBP18.09■□□□□ 0.49
VEGFA-201ENST00000230480 KRT24Q2M2I5 525 aa18.09■□□□□ 0.49
VEGFA-201ENST00000230480 CANXP27824 592 aaKnown RBP18.08■□□□□ 0.48
VEGFA-201ENST00000230480 FKBP8Q14318 412 aa18.08■□□□□ 0.48
VEGFA-201ENST00000230480 LAMB4A4D0S4 1761 aa18.08■□□□□ 0.48
VEGFA-201ENST00000230480 SNRPA1P09661 255 aaKnown RBP18.07■□□□□ 0.48
VEGFA-201ENST00000230480 TEX13AQ9BXU3 409 aaPredicted RBP18.07■□□□□ 0.48
VEGFA-201ENST00000230480 KIAA1551Q9HCM1 1747 aa18.06■□□□□ 0.48
VEGFA-201ENST00000230480 COL15A1P39059 1388 aa18.06■□□□□ 0.48
VEGFA-201ENST00000230480 TM4SF1P30408 202 aa18.06■□□□□ 0.48
VEGFA-201ENST00000230480 DDR1Q08345 913 aa18.06■□□□□ 0.48
VEGFA-201ENST00000230480 LRP10Q7Z4F1 713 aa18.06■□□□□ 0.48
VEGFA-201ENST00000230480 PPP1R1BQ9UD71 204 aaPredicted RBP18.06■□□□□ 0.48
VEGFA-201ENST00000230480 KIF13BQ9NQT8 1826 aa18.05■□□□□ 0.48
VEGFA-201ENST00000230480 STARD3NLO95772 234 aa18.05■□□□□ 0.48
VEGFA-201ENST00000230480 PDIA6Q15084 440 aa18.05■□□□□ 0.48
VEGFA-201ENST00000230480 USPL1Q5W0Q7 1092 aa18.05■□□□□ 0.48
VEGFA-201ENST00000230480 NLGN2Q8NFZ4 835 aa18.05■□□□□ 0.48
VEGFA-201ENST00000230480 BABAM1Q9NWV8 329 aa18.05■□□□□ 0.48
VEGFA-201ENST00000230480 NARFQ9UHQ1 456 aa18.05■□□□□ 0.48
VEGFA-201ENST00000230480 MMP10P09238 476 aa18.04■□□□□ 0.48
VEGFA-201ENST00000230480 RFC4P35249 363 aa18.04■□□□□ 0.48
VEGFA-201ENST00000230480 IL6STP40189 918 aaPredicted RBP18.04■□□□□ 0.48
VEGFA-201ENST00000230480 LMOD3Q0VAK6 560 aa18.04■□□□□ 0.48
VEGFA-201ENST00000230480 TSPYL4Q9UJ04 414 aa18.04■□□□□ 0.48
VEGFA-201ENST00000230480 AFDNP55196 1824 aaKnown RBP18.04■□□□□ 0.48
VEGFA-201ENST00000230480 BCORQ6W2J9 1755 aa18.02■□□□□ 0.48
VEGFA-201ENST00000230480 POLD1P28340 1107 aa18.02■□□□□ 0.48
VEGFA-201ENST00000230480 CCDC27Q2M243 656 aa18.02■□□□□ 0.48
VEGFA-201ENST00000230480 WWC1Q8IX03 1113 aa18.02■□□□□ 0.48
VEGFA-201ENST00000230480 NLGN1Q8N2Q7 840 aa18.02■□□□□ 0.48
VEGFA-201ENST00000230480 CFAP44Q96MT7 982 aa18.02■□□□□ 0.48
VEGFA-201ENST00000230480 MBIPQ9NS73 344 aa18.02■□□□□ 0.48
VEGFA-201ENST00000230480 NRXN2Q9P2S2 1712 aa18.02■□□□□ 0.48
VEGFA-201ENST00000230480 TBC1D2BQ9UPU7 963 aa18.02■□□□□ 0.48
VEGFA-201ENST00000230480 SCN7AQ01118 1682 aa18.02■□□□□ 0.47
VEGFA-201ENST00000230480 CAMTA2O94983 1202 aa18.01■□□□□ 0.47
VEGFA-201ENST00000230480 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
VEGFA-201ENST00000230480 POLRMTO00411 1230 aaKnown RBP18■□□□□ 0.47
VEGFA-201ENST00000230480 NFIXQ14938 502 aa18■□□□□ 0.47
VEGFA-201ENST00000230480 PROSER3Q2NL68 480 aa18■□□□□ 0.47
VEGFA-201ENST00000230480 FAM9BQ8IZU0 186 aa18■□□□□ 0.47
VEGFA-201ENST00000230480 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
VEGFA-201ENST00000230480 MIER1Q8N108 512 aa17.98■□□□□ 0.47
VEGFA-201ENST00000230480 ANXA1P04083 346 aa17.97■□□□□ 0.47
VEGFA-201ENST00000230480 TBC1D9BQ66K14 1250 aa17.97■□□□□ 0.47
VEGFA-201ENST00000230480 TTLL7Q6ZT98 887 aa17.97■□□□□ 0.47
VEGFA-201ENST00000230480 IFT57Q9NWB7 429 aa17.97■□□□□ 0.47
VEGFA-201ENST00000230480 LAS1LQ9Y4W2 734 aaKnown RBP17.97■□□□□ 0.47
VEGFA-201ENST00000230480 CD2APQ9Y5K6 639 aa17.97■□□□□ 0.47
VEGFA-201ENST00000230480 NUP98P52948 1817 aa17.97■□□□□ 0.47
VEGFA-201ENST00000230480 C10orf71Q711Q0 1435 aa17.97■□□□□ 0.47
VEGFA-201ENST00000230480 ZNF521Q96K83 1311 aa17.97■□□□□ 0.47
VEGFA-201ENST00000230480 N4BP2Q86UW6 1770 aaPredicted RBP17.96■□□□□ 0.47
VEGFA-201ENST00000230480 DCAF8L1A6NGE4 600 aa17.96■□□□□ 0.47
VEGFA-201ENST00000230480 CCER2I3L3R5 266 aa17.96■□□□□ 0.47
VEGFA-201ENST00000230480 HLFQ16534 295 aa17.96■□□□□ 0.47
VEGFA-201ENST00000230480 C8orf58Q8NAV2 365 aa17.96■□□□□ 0.47
VEGFA-201ENST00000230480 BRCA1P38398 1863 aaKnown RBP17.95■□□□□ 0.46
VEGFA-201ENST00000230480 ANKRD31Q8N7Z5 1873 aa17.95■□□□□ 0.46
VEGFA-201ENST00000230480 ZPR1O75312 459 aa17.95■□□□□ 0.46
VEGFA-201ENST00000230480 DZIP3Q86Y13 1208 aaKnown RBP17.95■□□□□ 0.46
VEGFA-201ENST00000230480 TSPYL6Q8N831 410 aa17.95■□□□□ 0.46
VEGFA-201ENST00000230480 UTRNP46939 3433 aa17.95■□□□□ 0.46
VEGFA-201ENST00000230480 A0A087WZG4 1122 aa17.94■□□□□ 0.46
VEGFA-201ENST00000230480 KCNA3P22001 575 aa17.94■□□□□ 0.46
VEGFA-201ENST00000230480 TSR2Q969E8 191 aaKnown RBP17.94■□□□□ 0.46
VEGFA-201ENST00000230480 ZNF330Q9Y3S2 320 aaPredicted RBP17.94■□□□□ 0.46
VEGFA-201ENST00000230480 SALL2Q9Y467 1007 aaPredicted RBP17.94■□□□□ 0.46
VEGFA-201ENST00000230480 PXDNLA1KZ92 1463 aa17.94■□□□□ 0.46
VEGFA-201ENST00000230480 CARMIL3Q8ND23 1372 aa17.93■□□□□ 0.46
VEGFA-201ENST00000230480 YBX3P16989 372 aaKnown RBP eCLIP17.93■□□□□ 0.46
VEGFA-201ENST00000230480 EIF2S2P20042 333 aaKnown RBP17.93■□□□□ 0.46
VEGFA-201ENST00000230480 DUSP27Q5VZP5 1158 aa17.93■□□□□ 0.46
VEGFA-201ENST00000230480 DIEXFQ68CQ4 756 aaKnown RBP17.93■□□□□ 0.46
VEGFA-201ENST00000230480 GOLGB1Q14789 3259 aaKnown RBP17.93■□□□□ 0.46
VEGFA-201ENST00000230480 GNAI1P63096 354 aa17.92■□□□□ 0.46
VEGFA-201ENST00000230480 KLHL34Q8N239 644 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms