RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.26■■□□□ 1.95
CCDC9-201ENST00000221922 CHPF2Q9P2E5 772 aa27.26■■□□□ 1.95
CCDC9-201ENST00000221922 SKOR2Q2VWA4 1001 aaPredicted RBP27.26■■□□□ 1.95
CCDC9-201ENST00000221922 CLEC17AQ6ZS10 378 aa27.25■■□□□ 1.95
CCDC9-201ENST00000221922 USP26Q9BXU7 913 aa27.25■■□□□ 1.95
CCDC9-201ENST00000221922 LRRCC1Q9C099 1032 aa27.25■■□□□ 1.95
CCDC9-201ENST00000221922 UBTFL1P0CB47 393 aaPredicted RBP27.25■■□□□ 1.95
CCDC9-201ENST00000221922 PDE1AP54750 535 aa27.25■■□□□ 1.95
CCDC9-201ENST00000221922 MEGF6O75095 1541 aa27.24■■□□□ 1.95
CCDC9-201ENST00000221922 TATP17735 454 aaPredicted RBP27.24■■□□□ 1.95
CCDC9-201ENST00000221922 BRINP3Q76B58 766 aa27.24■■□□□ 1.95
CCDC9-201ENST00000221922 CABLES1Q8TDN4 633 aa27.24■■□□□ 1.95
CCDC9-201ENST00000221922 USP44Q9H0E7 712 aa27.24■■□□□ 1.95
CCDC9-201ENST00000221922 PANK2Q9BZ23 570 aa27.23■■□□□ 1.95
CCDC9-201ENST00000221922 EXOC6BQ9Y2D4 811 aa27.23■■□□□ 1.95
CCDC9-201ENST00000221922 LRRFIP2Q9Y608 721 aaKnown RBP27.23■■□□□ 1.95
CCDC9-201ENST00000221922 PKD1L3Q7Z443 1732 aa27.23■■□□□ 1.95
CCDC9-201ENST00000221922 IBTKQ9P2D0 1353 aaPredicted RBP27.23■■□□□ 1.95
CCDC9-201ENST00000221922 GIGYF1O75420 1035 aaPredicted RBP27.23■■□□□ 1.95
CCDC9-201ENST00000221922 DBF4Q9UBU7 674 aaPredicted RBP27.23■■□□□ 1.95
CCDC9-201ENST00000221922 SPG7Q9UQ90 795 aa27.23■■□□□ 1.95
CCDC9-201ENST00000221922 TUBGCP6Q96RT7 1819 aa27.22■■□□□ 1.95
CCDC9-201ENST00000221922 SRCIN1Q9C0H9 1055 aa27.22■■□□□ 1.95
CCDC9-201ENST00000221922 PNMA6EA0A0J9YXQ4 647 aa27.21■■□□□ 1.95
CCDC9-201ENST00000221922 REC8O95072 547 aa27.21■■□□□ 1.95
CCDC9-201ENST00000221922 RRAGDQ9NQL2 400 aaPredicted RBP27.21■■□□□ 1.95
CCDC9-201ENST00000221922 KDM6AO15550 1401 aaPredicted RBP27.21■■□□□ 1.95
CCDC9-201ENST00000221922 ARXQ96QS3 562 aa27.21■■□□□ 1.95
CCDC9-201ENST00000221922 GRPEL1Q9HAV7 217 aa27.21■■□□□ 1.95
CCDC9-201ENST00000221922 FOXD4L1Q9NU39 408 aa27.2■■□□□ 1.95
CCDC9-201ENST00000221922 SALL3Q9BXA9 1300 aa27.2■■□□□ 1.94
CCDC9-201ENST00000221922 DNAAF4Q8WXU2 420 aa27.2■■□□□ 1.94
CCDC9-201ENST00000221922 CSB-PGBD3P0DP91 1061 aa27.19■■□□□ 1.94
CCDC9-201ENST00000221922 PHKG2P15735 406 aa27.19■■□□□ 1.94
CCDC9-201ENST00000221922 MRC1P22897 1456 aa27.18■■□□□ 1.94
CCDC9-201ENST00000221922 ADCY9O60503 1353 aa27.18■■□□□ 1.94
CCDC9-201ENST00000221922 CHRNA2Q15822 529 aa27.18■■□□□ 1.94
CCDC9-201ENST00000221922 BEND3Q5T5X7 828 aa27.18■■□□□ 1.94
CCDC9-201ENST00000221922 SSH3Q8TE77 659 aa27.17■■□□□ 1.94
CCDC9-201ENST00000221922 PI4KAP2A4QPH2 592 aa27.17■■□□□ 1.94
CCDC9-201ENST00000221922 ERC2O15083 957 aa27.17■■□□□ 1.94
CCDC9-201ENST00000221922 MX1P20591 662 aa27.17■■□□□ 1.94
CCDC9-201ENST00000221922 SSFA2P28290 1259 aa27.17■■□□□ 1.94
CCDC9-201ENST00000221922 PI4KAP1Q8N8J0 262 aa27.17■■□□□ 1.94
CCDC9-201ENST00000221922 SLC52A2Q9HAB3 445 aa27.17■■□□□ 1.94
CCDC9-201ENST00000221922 SOS2Q07890 1332 aaPredicted RBP27.16■■□□□ 1.94
CCDC9-201ENST00000221922 IFNL2Q8IZJ0 200 aa27.16■■□□□ 1.94
CCDC9-201ENST00000221922 RAB11FIP3O75154 756 aa27.15■■□□□ 1.94
CCDC9-201ENST00000221922 STAP2Q9UGK3 403 aa27.15■■□□□ 1.94
CCDC9-201ENST00000221922 AOX1Q06278 1338 aa27.15■■□□□ 1.94
CCDC9-201ENST00000221922 PARP4Q9UKK3 1724 aaKnown RBP27.14■■□□□ 1.94
CCDC9-201ENST00000221922 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.14■■□□□ 1.94
CCDC9-201ENST00000221922 SLAIN2Q9P270 581 aa27.13■■□□□ 1.93
CCDC9-201ENST00000221922 ANXA1P04083 346 aa27.13■■□□□ 1.93
CCDC9-201ENST00000221922 ZNF790Q6PG37 636 aa27.13■■□□□ 1.93
CCDC9-201ENST00000221922 HYPKQ9NX55 129 aa27.13■■□□□ 1.93
CCDC9-201ENST00000221922 C5P01031 1676 aa27.13■■□□□ 1.93
CCDC9-201ENST00000221922 ZNF335Q9H4Z2 1342 aaPredicted RBP27.13■■□□□ 1.93
CCDC9-201ENST00000221922 ABCA3Q99758 1704 aa27.12■■□□□ 1.93
CCDC9-201ENST00000221922 POLA2Q14181 598 aa27.12■■□□□ 1.93
CCDC9-201ENST00000221922 GOLGA6L22H0YM25 854 aa27.12■■□□□ 1.93
CCDC9-201ENST00000221922 DCAF5Q96JK2 942 aa27.11■■□□□ 1.93
CCDC9-201ENST00000221922 BAG4O95429 457 aaKnown RBP27.1■■□□□ 1.93
CCDC9-201ENST00000221922 PPP1R42Q7Z4L9 355 aa27.1■■□□□ 1.93
CCDC9-201ENST00000221922 GAS2L3Q86XJ1 694 aa27.1■■□□□ 1.93
CCDC9-201ENST00000221922 ALDH1L1O75891 902 aa27.1■■□□□ 1.93
CCDC9-201ENST00000221922 NUCB2P80303 420 aa27.1■■□□□ 1.93
CCDC9-201ENST00000221922 PROSER3Q2NL68 480 aa27.1■■□□□ 1.93
CCDC9-201ENST00000221922 KSR2Q6VAB6 950 aa27.1■■□□□ 1.93
CCDC9-201ENST00000221922 DDX21Q9NR30 783 aaKnown RBP eCLIP27.1■■□□□ 1.93
CCDC9-201ENST00000221922 PRAMEF22A3QJZ6 481 aa27.09■■□□□ 1.93
CCDC9-201ENST00000221922 CYP2E1P05181 493 aaPredicted RBP27.09■■□□□ 1.93
CCDC9-201ENST00000221922 CYP27B1O15528 508 aa27.09■■□□□ 1.93
CCDC9-201ENST00000221922 AK9Q5TCS8 1911 aa27.08■■□□□ 1.93
CCDC9-201ENST00000221922 ST18O60284 1047 aa27.08■■□□□ 1.93
CCDC9-201ENST00000221922 CWC22Q9HCG8 908 aaKnown RBP27.08■■□□□ 1.93
CCDC9-201ENST00000221922 NBPF7P0C2Y1 421 aaPredicted RBP27.07■■□□□ 1.92
CCDC9-201ENST00000221922 KLHL40Q2TBA0 621 aa27.07■■□□□ 1.92
CCDC9-201ENST00000221922 NFATC2IPQ8NCF5 419 aa27.07■■□□□ 1.92
CCDC9-201ENST00000221922 HDAC5Q9UQL6 1122 aa27.07■■□□□ 1.92
CCDC9-201ENST00000221922 MAP3K2Q9Y2U5 619 aa27.07■■□□□ 1.92
CCDC9-201ENST00000221922 WDR17Q8IZU2 1322 aa27.07■■□□□ 1.92
CCDC9-201ENST00000221922 NHSL1Q5SYE7 1610 aa27.07■■□□□ 1.92
CCDC9-201ENST00000221922 SURF6O75683 361 aaKnown RBP27.06■■□□□ 1.92
CCDC9-201ENST00000221922 HSP90AB4PQ58FF6 505 aa27.06■■□□□ 1.92
CCDC9-201ENST00000221922 PRDM11Q9NQV5 511 aa27.06■■□□□ 1.92
CCDC9-201ENST00000221922 SRGAP3O43295 1099 aa27.05■■□□□ 1.92
CCDC9-201ENST00000221922 ESYT1Q9BSJ8 1104 aa27.05■■□□□ 1.92
CCDC9-201ENST00000221922 DDX58O95786 925 aaKnown RBP27.05■■□□□ 1.92
CCDC9-201ENST00000221922 SLC39A6Q13433 755 aa27.05■■□□□ 1.92
CCDC9-201ENST00000221922 PDIA6Q15084 440 aa27.05■■□□□ 1.92
CCDC9-201ENST00000221922 TSHZ3Q63HK5 1081 aa27.05■■□□□ 1.92
CCDC9-201ENST00000221922 KIF1BPQ96EK5 621 aa27.05■■□□□ 1.92
CCDC9-201ENST00000221922 COL5A2P05997 1499 aaPredicted RBP27.05■■□□□ 1.92
CCDC9-201ENST00000221922 CLCN1P35523 988 aa27.04■■□□□ 1.92
CCDC9-201ENST00000221922 TRIM6-TRIM34B2RNG4 842 aa27.03■■□□□ 1.92
CCDC9-201ENST00000221922 MTX1Q13505 466 aa27.03■■□□□ 1.92
CCDC9-201ENST00000221922 RHPN1Q8TCX5 695 aa27.03■■□□□ 1.92
CCDC9-201ENST00000221922 MCCP23508 829 aa27.02■■□□□ 1.92
CCDC9-201ENST00000221922 CHMLP26374 656 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms