RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.26■■□□□ 1.95
CCDC9-201ENST00000221922 CHPF2Q9P2E5 772 aa27.26■■□□□ 1.95
CCDC9-201ENST00000221922 SKOR2Q2VWA4 1001 aaPredicted RBP27.26■■□□□ 1.95
CCDC9-201ENST00000221922 CLEC17AQ6ZS10 378 aa27.25■■□□□ 1.95
CCDC9-201ENST00000221922 USP26Q9BXU7 913 aa27.25■■□□□ 1.95
CCDC9-201ENST00000221922 LRRCC1Q9C099 1032 aa27.25■■□□□ 1.95
CCDC9-201ENST00000221922 UBTFL1P0CB47 393 aaPredicted RBP27.25■■□□□ 1.95
CCDC9-201ENST00000221922 PDE1AP54750 535 aa27.25■■□□□ 1.95
CCDC9-201ENST00000221922 MEGF6O75095 1541 aa27.24■■□□□ 1.95
CCDC9-201ENST00000221922 TATP17735 454 aaPredicted RBP27.24■■□□□ 1.95
CCDC9-201ENST00000221922 BRINP3Q76B58 766 aa27.24■■□□□ 1.95
CCDC9-201ENST00000221922 CABLES1Q8TDN4 633 aa27.24■■□□□ 1.95
CCDC9-201ENST00000221922 USP44Q9H0E7 712 aa27.24■■□□□ 1.95
CCDC9-201ENST00000221922 PANK2Q9BZ23 570 aa27.23■■□□□ 1.95
CCDC9-201ENST00000221922 EXOC6BQ9Y2D4 811 aa27.23■■□□□ 1.95
CCDC9-201ENST00000221922 LRRFIP2Q9Y608 721 aaKnown RBP27.23■■□□□ 1.95
CCDC9-201ENST00000221922 PKD1L3Q7Z443 1732 aa27.23■■□□□ 1.95
CCDC9-201ENST00000221922 IBTKQ9P2D0 1353 aaPredicted RBP27.23■■□□□ 1.95
CCDC9-201ENST00000221922 GIGYF1O75420 1035 aaPredicted RBP27.23■■□□□ 1.95
CCDC9-201ENST00000221922 DBF4Q9UBU7 674 aaPredicted RBP27.23■■□□□ 1.95
CCDC9-201ENST00000221922 SPG7Q9UQ90 795 aa27.23■■□□□ 1.95
CCDC9-201ENST00000221922 TUBGCP6Q96RT7 1819 aa27.22■■□□□ 1.95
CCDC9-201ENST00000221922 SRCIN1Q9C0H9 1055 aa27.22■■□□□ 1.95
CCDC9-201ENST00000221922 PNMA6EA0A0J9YXQ4 647 aa27.21■■□□□ 1.95
CCDC9-201ENST00000221922 REC8O95072 547 aa27.21■■□□□ 1.95
CCDC9-201ENST00000221922 RRAGDQ9NQL2 400 aaPredicted RBP27.21■■□□□ 1.95
CCDC9-201ENST00000221922 KDM6AO15550 1401 aaPredicted RBP27.21■■□□□ 1.95
CCDC9-201ENST00000221922 ARXQ96QS3 562 aa27.21■■□□□ 1.95
CCDC9-201ENST00000221922 GRPEL1Q9HAV7 217 aa27.21■■□□□ 1.95
CCDC9-201ENST00000221922 FOXD4L1Q9NU39 408 aa27.2■■□□□ 1.95
CCDC9-201ENST00000221922 SALL3Q9BXA9 1300 aa27.2■■□□□ 1.94
CCDC9-201ENST00000221922 DNAAF4Q8WXU2 420 aa27.2■■□□□ 1.94
CCDC9-201ENST00000221922 CSB-PGBD3P0DP91 1061 aa27.19■■□□□ 1.94
CCDC9-201ENST00000221922 PHKG2P15735 406 aa27.19■■□□□ 1.94
CCDC9-201ENST00000221922 MRC1P22897 1456 aa27.18■■□□□ 1.94
CCDC9-201ENST00000221922 ADCY9O60503 1353 aa27.18■■□□□ 1.94
CCDC9-201ENST00000221922 CHRNA2Q15822 529 aa27.18■■□□□ 1.94
CCDC9-201ENST00000221922 BEND3Q5T5X7 828 aa27.18■■□□□ 1.94
CCDC9-201ENST00000221922 SSH3Q8TE77 659 aa27.17■■□□□ 1.94
CCDC9-201ENST00000221922 PI4KAP2A4QPH2 592 aa27.17■■□□□ 1.94
CCDC9-201ENST00000221922 ERC2O15083 957 aa27.17■■□□□ 1.94
CCDC9-201ENST00000221922 MX1P20591 662 aa27.17■■□□□ 1.94
CCDC9-201ENST00000221922 SSFA2P28290 1259 aa27.17■■□□□ 1.94
CCDC9-201ENST00000221922 PI4KAP1Q8N8J0 262 aa27.17■■□□□ 1.94
CCDC9-201ENST00000221922 SLC52A2Q9HAB3 445 aa27.17■■□□□ 1.94
CCDC9-201ENST00000221922 SOS2Q07890 1332 aaPredicted RBP27.16■■□□□ 1.94
CCDC9-201ENST00000221922 IFNL2Q8IZJ0 200 aa27.16■■□□□ 1.94
CCDC9-201ENST00000221922 RAB11FIP3O75154 756 aa27.15■■□□□ 1.94
CCDC9-201ENST00000221922 STAP2Q9UGK3 403 aa27.15■■□□□ 1.94
CCDC9-201ENST00000221922 AOX1Q06278 1338 aa27.15■■□□□ 1.94
CCDC9-201ENST00000221922 PARP4Q9UKK3 1724 aaKnown RBP27.14■■□□□ 1.94
CCDC9-201ENST00000221922 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.14■■□□□ 1.94
CCDC9-201ENST00000221922 SLAIN2Q9P270 581 aa27.13■■□□□ 1.93
CCDC9-201ENST00000221922 ANXA1P04083 346 aa27.13■■□□□ 1.93
CCDC9-201ENST00000221922 ZNF790Q6PG37 636 aa27.13■■□□□ 1.93
CCDC9-201ENST00000221922 HYPKQ9NX55 129 aa27.13■■□□□ 1.93
CCDC9-201ENST00000221922 C5P01031 1676 aa27.13■■□□□ 1.93
CCDC9-201ENST00000221922 ZNF335Q9H4Z2 1342 aaPredicted RBP27.13■■□□□ 1.93
CCDC9-201ENST00000221922 ABCA3Q99758 1704 aa27.12■■□□□ 1.93
CCDC9-201ENST00000221922 POLA2Q14181 598 aa27.12■■□□□ 1.93
CCDC9-201ENST00000221922 GOLGA6L22H0YM25 854 aa27.12■■□□□ 1.93
CCDC9-201ENST00000221922 DCAF5Q96JK2 942 aa27.11■■□□□ 1.93
CCDC9-201ENST00000221922 BAG4O95429 457 aaKnown RBP27.1■■□□□ 1.93
CCDC9-201ENST00000221922 PPP1R42Q7Z4L9 355 aa27.1■■□□□ 1.93
CCDC9-201ENST00000221922 GAS2L3Q86XJ1 694 aa27.1■■□□□ 1.93
CCDC9-201ENST00000221922 ALDH1L1O75891 902 aa27.1■■□□□ 1.93
CCDC9-201ENST00000221922 NUCB2P80303 420 aa27.1■■□□□ 1.93
CCDC9-201ENST00000221922 PROSER3Q2NL68 480 aa27.1■■□□□ 1.93
CCDC9-201ENST00000221922 KSR2Q6VAB6 950 aa27.1■■□□□ 1.93
CCDC9-201ENST00000221922 DDX21Q9NR30 783 aaKnown RBP eCLIP27.1■■□□□ 1.93
CCDC9-201ENST00000221922 PRAMEF22A3QJZ6 481 aa27.09■■□□□ 1.93
CCDC9-201ENST00000221922 CYP2E1P05181 493 aaPredicted RBP27.09■■□□□ 1.93
CCDC9-201ENST00000221922 CYP27B1O15528 508 aa27.09■■□□□ 1.93
CCDC9-201ENST00000221922 AK9Q5TCS8 1911 aa27.08■■□□□ 1.93
CCDC9-201ENST00000221922 ST18O60284 1047 aa27.08■■□□□ 1.93
CCDC9-201ENST00000221922 CWC22Q9HCG8 908 aaKnown RBP27.08■■□□□ 1.93
CCDC9-201ENST00000221922 NBPF7P0C2Y1 421 aaPredicted RBP27.07■■□□□ 1.92
CCDC9-201ENST00000221922 KLHL40Q2TBA0 621 aa27.07■■□□□ 1.92
CCDC9-201ENST00000221922 NFATC2IPQ8NCF5 419 aa27.07■■□□□ 1.92
CCDC9-201ENST00000221922 HDAC5Q9UQL6 1122 aa27.07■■□□□ 1.92
CCDC9-201ENST00000221922 MAP3K2Q9Y2U5 619 aa27.07■■□□□ 1.92
CCDC9-201ENST00000221922 WDR17Q8IZU2 1322 aa27.07■■□□□ 1.92
CCDC9-201ENST00000221922 NHSL1Q5SYE7 1610 aa27.07■■□□□ 1.92
CCDC9-201ENST00000221922 SURF6O75683 361 aaKnown RBP27.06■■□□□ 1.92
CCDC9-201ENST00000221922 HSP90AB4PQ58FF6 505 aa27.06■■□□□ 1.92
CCDC9-201ENST00000221922 PRDM11Q9NQV5 511 aa27.06■■□□□ 1.92
CCDC9-201ENST00000221922 SRGAP3O43295 1099 aa27.05■■□□□ 1.92
CCDC9-201ENST00000221922 ESYT1Q9BSJ8 1104 aa27.05■■□□□ 1.92
CCDC9-201ENST00000221922 DDX58O95786 925 aaKnown RBP27.05■■□□□ 1.92
CCDC9-201ENST00000221922 SLC39A6Q13433 755 aa27.05■■□□□ 1.92
CCDC9-201ENST00000221922 PDIA6Q15084 440 aa27.05■■□□□ 1.92
CCDC9-201ENST00000221922 TSHZ3Q63HK5 1081 aa27.05■■□□□ 1.92
CCDC9-201ENST00000221922 KIF1BPQ96EK5 621 aa27.05■■□□□ 1.92
CCDC9-201ENST00000221922 COL5A2P05997 1499 aaPredicted RBP27.05■■□□□ 1.92
CCDC9-201ENST00000221922 CLCN1P35523 988 aa27.04■■□□□ 1.92
CCDC9-201ENST00000221922 TRIM6-TRIM34B2RNG4 842 aa27.03■■□□□ 1.92
CCDC9-201ENST00000221922 MTX1Q13505 466 aa27.03■■□□□ 1.92
CCDC9-201ENST00000221922 RHPN1Q8TCX5 695 aa27.03■■□□□ 1.92
CCDC9-201ENST00000221922 MCCP23508 829 aa27.02■■□□□ 1.92
CCDC9-201ENST00000221922 CHMLP26374 656 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms