RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 GOLGA6L19H0YKK7 550 aa20.46■□□□□ 0.87
PTPN18-201ENST00000175756 RAB11FIP3O75154 756 aa20.46■□□□□ 0.87
PTPN18-201ENST00000175756 NPHP1O15259 732 aa20.46■□□□□ 0.87
PTPN18-201ENST00000175756 MPRIPQ6WCQ1 1025 aa20.46■□□□□ 0.87
PTPN18-201ENST00000175756 ZNF330Q9Y3S2 320 aaPredicted RBP20.46■□□□□ 0.87
PTPN18-201ENST00000175756 KIF3AQ9Y496 699 aa20.46■□□□□ 0.87
PTPN18-201ENST00000175756 PIK3R4Q99570 1358 aa20.45■□□□□ 0.86
PTPN18-201ENST00000175756 BECN2A8MW95 431 aa20.45■□□□□ 0.86
PTPN18-201ENST00000175756 C1orf141Q5JVX7 400 aa20.45■□□□□ 0.86
PTPN18-201ENST00000175756 TNMDQ9H2S6 317 aa20.45■□□□□ 0.86
PTPN18-201ENST00000175756 EDC4Q6P2E9 1401 aaKnown RBP20.45■□□□□ 0.86
PTPN18-201ENST00000175756 ADGRB1O14514 1584 aa20.45■□□□□ 0.86
PTPN18-201ENST00000175756 LETM1O95202 739 aaPredicted RBP20.45■□□□□ 0.86
PTPN18-201ENST00000175756 MCM5P33992 734 aa20.45■□□□□ 0.86
PTPN18-201ENST00000175756 UBE2HP62256 183 aa20.45■□□□□ 0.86
PTPN18-201ENST00000175756 KRT85P78386 507 aa20.45■□□□□ 0.86
PTPN18-201ENST00000175756 HMGN5P82970 282 aaKnown RBP20.45■□□□□ 0.86
PTPN18-201ENST00000175756 CHPF2Q9P2E5 772 aa20.45■□□□□ 0.86
PTPN18-201ENST00000175756 DYNC1I1O14576 645 aa20.44■□□□□ 0.86
PTPN18-201ENST00000175756 NBPF7P0C2Y1 421 aaPredicted RBP20.44■□□□□ 0.86
PTPN18-201ENST00000175756 ANAPC15P60006 121 aa20.44■□□□□ 0.86
PTPN18-201ENST00000175756 MROH2AA6NES4 1674 aa20.44■□□□□ 0.86
PTPN18-201ENST00000175756 SHPRHQ149N8 1683 aa20.44■□□□□ 0.86
PTPN18-201ENST00000175756 CYP2E1P05181 493 aaPredicted RBP20.43■□□□□ 0.86
PTPN18-201ENST00000175756 ZNF530Q6P9A1 599 aaPredicted RBP20.43■□□□□ 0.86
PTPN18-201ENST00000175756 INTS4Q96HW7 963 aaKnown RBP20.43■□□□□ 0.86
PTPN18-201ENST00000175756 DNAJC2Q99543 621 aaKnown RBP20.43■□□□□ 0.86
PTPN18-201ENST00000175756 GLRX3O76003 335 aaKnown RBP20.43■□□□□ 0.86
PTPN18-201ENST00000175756 DNAAF4Q8WXU2 420 aa20.43■□□□□ 0.86
PTPN18-201ENST00000175756 USP44Q9H0E7 712 aa20.43■□□□□ 0.86
PTPN18-201ENST00000175756 NUP62CLQ9H1M0 184 aa20.43■□□□□ 0.86
PTPN18-201ENST00000175756 RNF20Q5VTR2 975 aa20.42■□□□□ 0.86
PTPN18-201ENST00000175756 RIC3Q7Z5B4 369 aa20.42■□□□□ 0.86
PTPN18-201ENST00000175756 RASEFQ8IZ41 740 aa20.42■□□□□ 0.86
PTPN18-201ENST00000175756 SNX14Q9Y5W7 946 aa20.42■□□□□ 0.86
PTPN18-201ENST00000175756 ZNF500O60304 480 aaPredicted RBP20.42■□□□□ 0.86
PTPN18-201ENST00000175756 F13A1P00488 732 aa20.42■□□□□ 0.86
PTPN18-201ENST00000175756 BLOC1S2Q6QNY1 142 aa20.42■□□□□ 0.86
PTPN18-201ENST00000175756 MTERF4Q7Z6M4 381 aaKnown RBP20.42■□□□□ 0.86
PTPN18-201ENST00000175756 IGSF3O75054 1194 aa20.42■□□□□ 0.86
PTPN18-201ENST00000175756 MYL6BP14649 208 aa20.42■□□□□ 0.86
PTPN18-201ENST00000175756 SPATA32Q96LK8 384 aa20.42■□□□□ 0.86
PTPN18-201ENST00000175756 METP08581 1390 aa20.41■□□□□ 0.86
PTPN18-201ENST00000175756 ABCC3O15438 1527 aa20.41■□□□□ 0.86
PTPN18-201ENST00000175756 BTBD11A6QL63 1104 aa20.41■□□□□ 0.86
PTPN18-201ENST00000175756 C16orf45Q96MC5 204 aaPredicted RBP20.41■□□□□ 0.86
PTPN18-201ENST00000175756 AMOTL2Q9Y2J4 779 aa20.41■□□□□ 0.86
PTPN18-201ENST00000175756 NRXN1Q9ULB1 1477 aa20.4■□□□□ 0.86
PTPN18-201ENST00000175756 KIAA1210Q9ULL0 1709 aa20.4■□□□□ 0.86
PTPN18-201ENST00000175756 SETBP1Q9Y6X0 1596 aa20.4■□□□□ 0.86
PTPN18-201ENST00000175756 PSME1Q06323 249 aa20.4■□□□□ 0.86
PTPN18-201ENST00000175756 CLEC17AQ6ZS10 378 aa20.4■□□□□ 0.86
PTPN18-201ENST00000175756 KDM4AO75164 1064 aa20.4■□□□□ 0.86
PTPN18-201ENST00000175756 SOS1Q07889 1333 aaPredicted RBP20.4■□□□□ 0.86
PTPN18-201ENST00000175756 MAP3K11Q16584 847 aa20.4■□□□□ 0.86
PTPN18-201ENST00000175756 TPD52L1Q16890 204 aaPredicted RBP20.4■□□□□ 0.86
PTPN18-201ENST00000175756 PRR36Q9H6K5 1346 aa20.39■□□□□ 0.86
PTPN18-201ENST00000175756 PPP4R3BQ5MIZ7 849 aa20.39■□□□□ 0.86
PTPN18-201ENST00000175756 FMNL2Q96PY5 1086 aa20.39■□□□□ 0.86
PTPN18-201ENST00000175756 IBTKQ9P2D0 1353 aaPredicted RBP20.39■□□□□ 0.85
PTPN18-201ENST00000175756 NEUROD6Q96NK8 337 aa20.39■□□□□ 0.85
PTPN18-201ENST00000175756 SF3A1Q15459 793 aaKnown RBP20.38■□□□□ 0.85
PTPN18-201ENST00000175756 FILIP1Q7Z7B0 1213 aa20.38■□□□□ 0.85
PTPN18-201ENST00000175756 PSMA5P28066 241 aa20.38■□□□□ 0.85
PTPN18-201ENST00000175756 CWF19L2Q2TBE0 894 aaKnown RBP20.38■□□□□ 0.85
PTPN18-201ENST00000175756 IL25Q9H293 177 aa20.38■□□□□ 0.85
PTPN18-201ENST00000175756 ECHDC1Q9NTX5 307 aa20.38■□□□□ 0.85
PTPN18-201ENST00000175756 MED14O60244 1454 aa20.38■□□□□ 0.85
PTPN18-201ENST00000175756 LUZP1Q86V48 1076 aa20.37■□□□□ 0.85
PTPN18-201ENST00000175756 LRRC2Q9BYS8 371 aa20.37■□□□□ 0.85
PTPN18-201ENST00000175756 SGSM2O43147 1006 aa20.37■□□□□ 0.85
PTPN18-201ENST00000175756 HTATSF1O43719 755 aaKnown RBP20.37■□□□□ 0.85
PTPN18-201ENST00000175756 HSPA4P34932 840 aa20.37■□□□□ 0.85
PTPN18-201ENST00000175756 PDCL2Q8N4E4 241 aa20.37■□□□□ 0.85
PTPN18-201ENST00000175756 CSB-PGBD3P0DP91 1061 aa20.37■□□□□ 0.85
PTPN18-201ENST00000175756 NEXNQ0ZGT2 675 aa20.37■□□□□ 0.85
PTPN18-201ENST00000175756 MAP3K2Q9Y2U5 619 aa20.37■□□□□ 0.85
PTPN18-201ENST00000175756 PDCP20941 246 aa20.36■□□□□ 0.85
PTPN18-201ENST00000175756 PDLIM2Q96JY6 352 aa20.36■□□□□ 0.85
PTPN18-201ENST00000175756 OSBPL3Q9H4L5 887 aa20.36■□□□□ 0.85
PTPN18-201ENST00000175756 DACT1Q9NYF0 836 aa20.36■□□□□ 0.85
PTPN18-201ENST00000175756 HDAC5Q9UQL6 1122 aa20.36■□□□□ 0.85
PTPN18-201ENST00000175756 RBM8AQ9Y5S9 174 aaKnown RBP20.36■□□□□ 0.85
PTPN18-201ENST00000175756 INO80Q9ULG1 1556 aaPredicted RBP20.36■□□□□ 0.85
PTPN18-201ENST00000175756 RUFY3Q7L099 469 aa20.35■□□□□ 0.85
PTPN18-201ENST00000175756 IL17REQ8NFR9 667 aa20.35■□□□□ 0.85
PTPN18-201ENST00000175756 PTGS1P23219 599 aa20.35■□□□□ 0.85
PTPN18-201ENST00000175756 GUCY1B3Q02153 619 aa20.35■□□□□ 0.85
PTPN18-201ENST00000175756 CUL4AQ13619 759 aa20.35■□□□□ 0.85
PTPN18-201ENST00000175756 ZNF771Q7L3S4 317 aaPredicted RBP20.35■□□□□ 0.85
PTPN18-201ENST00000175756 CCDC186Q7Z3E2 898 aa20.35■□□□□ 0.85
PTPN18-201ENST00000175756 PTH1RQ03431 593 aa20.35■□□□□ 0.85
PTPN18-201ENST00000175756 ZSCAN31Q96LW9 406 aaPredicted RBP20.35■□□□□ 0.85
PTPN18-201ENST00000175756 LGR6Q9HBX8 967 aa20.35■□□□□ 0.85
PTPN18-201ENST00000175756 CHMP4AQ9BY43 222 aa20.34■□□□□ 0.85
PTPN18-201ENST00000175756 KIF24Q5T7B8 1368 aa20.34■□□□□ 0.85
PTPN18-201ENST00000175756 KCNQ3O43525 872 aa20.34■□□□□ 0.85
PTPN18-201ENST00000175756 LARGE1O95461 756 aa20.34■□□□□ 0.85
PTPN18-201ENST00000175756 ADCK5Q3MIX3 580 aa20.34■□□□□ 0.85
PTPN18-201ENST00000175756 KIAA0232Q92628 1395 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms