RNA–Protein interactions for RNA: ENSMUST00000193792.5

Sec61a2-209, Transcript of Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

TSL 1 (best) BASIC

Gene Sec61a2, Length 2,110 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2-209ENSMUST00000193792 SympkQ80X82 1284 aa18.89■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Atxn3Q9CVD2 355 aa18.89■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Cfap70D3YVL2 1141 aa18.88■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Esco1Q69Z69 843 aa18.88■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Dlg5E9Q9R9 1921 aa18.86■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Prdm11A2AGX3 565 aa18.86■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Bcl2l13P59017 434 aa18.86■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Magea6O89010 325 aa18.86■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Magea3Q6T340 320 aa18.86■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Cnksr1A2A9K7 700 aa18.85■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Hirip3Q8BLH7 601 aa18.85■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Ppm1fQ8CGA0 452 aa18.85■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Mrps5Q99N87 432 aaKnown RBP18.85■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Trip6Q9Z1Y4 480 aa18.85■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Slf2Q6P9P0 1278 aa18.85■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Ddx60E9PZQ1 1711 aa18.84■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Ankle2Q6P1H6 964 aa18.84■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Srp68Q8BMA6 625 aaKnown RBP18.84■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Ccdc30Q8BVF4 654 aa18.84■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Nlrp3Q8R4B8 1033 aa18.84■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 CpzQ8R4V4 654 aa18.84■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Tgfb2P27090 414 aa18.83■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 SowahdQ8BY98 327 aa18.83■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Slc39a6Q8C145 765 aa18.83■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Kank1E9Q238 1360 aa18.83■□□□□ 0.61
Sec61a2-209ENSMUST00000193792 Lama4P97927 1816 aa18.83■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Snai1Q02085 264 aa18.83■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 1810065E05RikQ5NC41 235 aa18.83■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Rad21Q61550 635 aaKnown RBP18.82■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Slfnl1Q8BHW9 410 aa18.82■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Ambra1A2AH22 1300 aa18.82■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 BcorQ8CGN4 1759 aa18.82■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Strn4P58404 760 aa18.82■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Kcna3P16390 528 aa18.81■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Tlr8P58682 1032 aa18.81■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Senp3Q9EP97 568 aaKnown RBP18.81■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Ksr2Q3UVC0 959 aa18.8■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 NgdnQ9DB96 315 aaKnown RBP18.8■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Zswim8Q3UHH1 1832 aaKnown RBP18.8■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Ccar1Q8CH18 1146 aaKnown RBP18.79■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Usp21Q9QZL6 566 aa18.79■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Lrp5Q91VN0 1614 aa18.78■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Supt5hO55201 1082 aaKnown RBP18.77■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Ifit1bl2Q3U687 466 aa18.77■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Trim34aQ99PP6 485 aa18.77■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Fkbp1aP26883 108 aaKnown RBP18.77■□□□□ 0.6
Sec61a2-209ENSMUST00000193792 Col4a1P02463 1669 aa18.77■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 CoilQ5SU73 570 aa18.76■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Ccdc171E9Q1U1 1324 aa18.76■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Gimap8Q75N62 688 aa18.76■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Tango6Q8C3S2 1079 aa18.76■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Vamp4O70480 141 aa18.75■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Rad23bP54728 416 aa18.75■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Zfp444Q3TDV8 331 aaKnown RBP18.74■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Kcnn1Q9EQR3 537 aa18.74■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Ssc5dQ8BV57 1371 aa18.74■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Sipa1l3G3X9J0 1776 aa18.74■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Npy5rO70342 466 aa18.74■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Irf9Q61179 399 aa18.74■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Zbtb40Q6PCS8 1258 aa18.74■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Echdc1Q9D9V3 322 aa18.74■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Mapk8ip1Q9WVI9 707 aa18.74■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Rtkn2Q14B46 604 aa18.73■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Arid3aQ62431 601 aa18.73■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 SnrkQ8VDU5 748 aa18.73■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Togaram1Q6A070 1776 aaKnown RBP18.73■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Hsp90ab1P11499 724 aaKnown RBP18.73■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Zc3h12cQ5DTV4 884 aa18.73■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Tktl2Q9D4D4 627 aa18.73■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Ttll7A4Q9F0 912 aa18.72■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Pde4bB1AWC9 736 aa18.72■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Chl1P70232 1209 aa18.72■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Rnf180Q3U827 592 aa18.72■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Cavin2Q63918 418 aaKnown RBP18.72■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Flt4P35917 1363 aa18.72■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Sv2bQ8BG39 683 aa18.71■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 St5Q924W7 1134 aa18.71■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 KarsQ99MN1 595 aaKnown RBP18.71■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Gm6268A2A3U9 297 aa18.71■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Cyp2c67Q569X9 491 aa18.71■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Ofd1Q80Z25 1017 aa18.71■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 Sgip1Q8VD37 806 aa18.71■□□□□ 0.59
Sec61a2-209ENSMUST00000193792 StrcQ8VIM6 1809 aa18.7■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 AbraQ8BUZ1 375 aa18.7■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 Duox1A2AQ92 1551 aa18.7■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 Stox1B2RQL2 990 aa18.69■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 IarsQ8BU30 1262 aa18.69■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 Lmnb1P14733 588 aaKnown RBP18.68■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 Igfbp6P47880 238 aa18.68■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 Ddx58Q6Q899 926 aa18.68■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 Camkk2Q8C078 588 aa18.68■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 Taf1dQ9D4V4 322 aa18.68■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 Rnaseh2aQ9CWY8 301 aa18.68■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 CltaO08585 235 aa18.67■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 Ccdc60Q8C4J0 545 aa18.67■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 Eif4g2Q62448 906 aaKnown RBP18.67■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 Ankib1Q6ZPS6 1085 aa18.66■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 Cyp2c23E9Q5K4 494 aa18.65■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 Fam83gQ5SWY7 812 aa18.65■□□□□ 0.58
Sec61a2-209ENSMUST00000193792 Mrc1Q61830 1456 aa18.65■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms