RNA–Protein interactions for RNA: ENSMUST00000129256.1

Vps53-204, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

TSL 1 (best) BASIC

Gene Vps53, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-204ENSMUST00000129256 Gm2244L7N2A3 218 aa19.03■□□□□ 0.64
Vps53-204ENSMUST00000129256 Gm3278L7N2D2 218 aa19.03■□□□□ 0.64
Vps53-204ENSMUST00000129256 Gm8271L7N2E2 218 aa19.03■□□□□ 0.64
Vps53-204ENSMUST00000129256 Ptcd1Q8C2E4 695 aaKnown RBP19.03■□□□□ 0.64
Vps53-204ENSMUST00000129256 Irx6Q9ER75 438 aa19.03■□□□□ 0.64
Vps53-204ENSMUST00000129256 Ppp1r3fQ9JIG4 799 aa19.03■□□□□ 0.64
Vps53-204ENSMUST00000129256 Setdb1O88974 1307 aa19.02■□□□□ 0.64
Vps53-204ENSMUST00000129256 Mtcl1Q3UHU5 1945 aa19.02■□□□□ 0.64
Vps53-204ENSMUST00000129256 Dusp27Q148W8 1138 aa19.02■□□□□ 0.64
Vps53-204ENSMUST00000129256 Pdzph1Q8BGR1 1238 aa19.02■□□□□ 0.64
Vps53-204ENSMUST00000129256 Prdm11A2AGX3 565 aa19.01■□□□□ 0.63
Vps53-204ENSMUST00000129256 Unc5clQ6R653 518 aa19.01■□□□□ 0.63
Vps53-204ENSMUST00000129256 Senp3Q9EP97 568 aaKnown RBP19.01■□□□□ 0.63
Vps53-204ENSMUST00000129256 Adcy9P51830 1353 aa18.99■□□□□ 0.63
Vps53-204ENSMUST00000129256 Cdca7Q9D0M2 382 aa18.99■□□□□ 0.63
Vps53-204ENSMUST00000129256 Kif13bA0A286YCV9 1847 aa18.99■□□□□ 0.63
Vps53-204ENSMUST00000129256 Tspoap1Q7TNF8 1846 aa18.99■□□□□ 0.63
Vps53-204ENSMUST00000129256 TmpoQ61033 693 aaKnown RBP18.98■□□□□ 0.63
Vps53-204ENSMUST00000129256 Zfp646Q6NV66 1788 aa18.97■□□□□ 0.63
Vps53-204ENSMUST00000129256 Arid3aQ62431 601 aa18.97■□□□□ 0.63
Vps53-204ENSMUST00000129256 Micall1Q8BGT6 870 aa18.97■□□□□ 0.63
Vps53-204ENSMUST00000129256 Prr5lA2AVJ5 370 aa18.96■□□□□ 0.63
Vps53-204ENSMUST00000129256 Stk31Q99MW1 1018 aa18.96■□□□□ 0.63
Vps53-204ENSMUST00000129256 MetP16056 1379 aa18.95■□□□□ 0.62
Vps53-204ENSMUST00000129256 NpcdF8VQB8 469 aa18.95■□□□□ 0.62
Vps53-204ENSMUST00000129256 Rapgef4Q9EQZ6 1011 aa18.95■□□□□ 0.62
Vps53-204ENSMUST00000129256 Cabp2Q9JLK4 216 aa18.95■□□□□ 0.62
Vps53-204ENSMUST00000129256 ClspnQ80YR7 1315 aa18.95■□□□□ 0.62
Vps53-204ENSMUST00000129256 Usp48Q3V0C5 1052 aa18.94■□□□□ 0.62
Vps53-204ENSMUST00000129256 Gm12185Q5NCB2 835 aa18.94■□□□□ 0.62
Vps53-204ENSMUST00000129256 Fbxo33Q8VE08 562 aa18.94■□□□□ 0.62
Vps53-204ENSMUST00000129256 Dpf1Q9QX66 387 aa18.94■□□□□ 0.62
Vps53-204ENSMUST00000129256 Ptf1aQ9QX98 324 aa18.94■□□□□ 0.62
Vps53-204ENSMUST00000129256 Usp19Q3UJD6 1360 aa18.93■□□□□ 0.62
Vps53-204ENSMUST00000129256 Lama2Q60675 3118 aaKnown RBP18.93■□□□□ 0.62
Vps53-204ENSMUST00000129256 Snai1Q02085 264 aa18.93■□□□□ 0.62
Vps53-204ENSMUST00000129256 Ddx60E9PZQ1 1711 aa18.92■□□□□ 0.62
Vps53-204ENSMUST00000129256 Plagl1Q9JLQ4 704 aa18.92■□□□□ 0.62
Vps53-204ENSMUST00000129256 Ambra1A2AH22 1300 aa18.92■□□□□ 0.62
Vps53-204ENSMUST00000129256 Col5a2Q3U962 1497 aa18.91■□□□□ 0.62
Vps53-204ENSMUST00000129256 Zfp777B9EKF4 885 aa18.91■□□□□ 0.62
Vps53-204ENSMUST00000129256 VegfbP49766 207 aa18.91■□□□□ 0.62
Vps53-204ENSMUST00000129256 Esco1Q69Z69 843 aa18.91■□□□□ 0.62
Vps53-204ENSMUST00000129256 Fam83gQ5SWY7 812 aa18.9■□□□□ 0.62
Vps53-204ENSMUST00000129256 Rasgrp4Q8BTM9 673 aa18.9■□□□□ 0.62
Vps53-204ENSMUST00000129256 Slc4a9E9PUP3 929 aa18.89■□□□□ 0.61
Vps53-204ENSMUST00000129256 Olfr247E9PVJ7 320 aa18.89■□□□□ 0.61
Vps53-204ENSMUST00000129256 Olfr819K7N727 320 aa18.89■□□□□ 0.61
Vps53-204ENSMUST00000129256 Btbd11Q6GQW0 1109 aa18.89■□□□□ 0.61
Vps53-204ENSMUST00000129256 Slf2Q6P9P0 1278 aa18.89■□□□□ 0.61
Vps53-204ENSMUST00000129256 Rab11fip3Q8CHD8 1047 aa18.89■□□□□ 0.61
Vps53-204ENSMUST00000129256 NefmP08553 848 aa18.88■□□□□ 0.61
Vps53-204ENSMUST00000129256 Cnnm1Q0GA42 951 aa18.88■□□□□ 0.61
Vps53-204ENSMUST00000129256 Cyp2c23E9Q5K4 494 aa18.87■□□□□ 0.61
Vps53-204ENSMUST00000129256 Dok7Q18PE0 504 aa18.87■□□□□ 0.61
Vps53-204ENSMUST00000129256 Fhdc1Q3ULZ2 1149 aa18.87■□□□□ 0.61
Vps53-204ENSMUST00000129256 Nlgn2Q69ZK9 836 aa18.87■□□□□ 0.61
Vps53-204ENSMUST00000129256 Mylk2Q8VCR8 613 aa18.87■□□□□ 0.61
Vps53-204ENSMUST00000129256 Glis2Q8VDL9 521 aa18.87■□□□□ 0.61
Vps53-204ENSMUST00000129256 Gigyf1Q99MR1 1044 aaKnown RBP18.87■□□□□ 0.61
Vps53-204ENSMUST00000129256 Nup188Q6ZQH8 1759 aa18.86■□□□□ 0.61
Vps53-204ENSMUST00000129256 Tsen2Q6P7W5 460 aa18.86■□□□□ 0.61
Vps53-204ENSMUST00000129256 Prkab2Q6PAM0 271 aa18.86■□□□□ 0.61
Vps53-204ENSMUST00000129256 St5Q924W7 1134 aa18.86■□□□□ 0.61
Vps53-204ENSMUST00000129256 Lama4P97927 1816 aa18.86■□□□□ 0.61
Vps53-204ENSMUST00000129256 Ifit1bl2Q3U687 466 aa18.85■□□□□ 0.61
Vps53-204ENSMUST00000129256 Slc39a6Q8C145 765 aa18.85■□□□□ 0.61
Vps53-204ENSMUST00000129256 Thsd7bQ6P4U0 1607 aa18.85■□□□□ 0.61
Vps53-204ENSMUST00000129256 Abcc12Q80WJ6 1366 aa18.84■□□□□ 0.61
Vps53-204ENSMUST00000129256 Csf1rP09581 977 aa18.84■□□□□ 0.61
Vps53-204ENSMUST00000129256 Bcl2l13P59017 434 aa18.84■□□□□ 0.61
Vps53-204ENSMUST00000129256 Adam1aQ60813 791 aa18.84■□□□□ 0.61
Vps53-204ENSMUST00000129256 Dbndd1Q9CZ00 160 aa18.84■□□□□ 0.61
Vps53-204ENSMUST00000129256 NgdnQ9DB96 315 aaKnown RBP18.84■□□□□ 0.61
Vps53-204ENSMUST00000129256 Zfp831A2ADM8 1628 aa18.82■□□□□ 0.6
Vps53-204ENSMUST00000129256 Trpm7Q923J1 1863 aa18.82■□□□□ 0.6
Vps53-204ENSMUST00000129256 Dcdc2bF7BCK0 340 aa18.82■□□□□ 0.6
Vps53-204ENSMUST00000129256 CltaO08585 235 aa18.82■□□□□ 0.6
Vps53-204ENSMUST00000129256 Dpf2Q61103 391 aaKnown RBP18.82■□□□□ 0.6
Vps53-204ENSMUST00000129256 Mical3Q8CJ19 1993 aa18.81■□□□□ 0.6
Vps53-204ENSMUST00000129256 Stox1B2RQL2 990 aa18.81■□□□□ 0.6
Vps53-204ENSMUST00000129256 Rbm5Q91YE7 815 aaKnown RBP18.81■□□□□ 0.6
Vps53-204ENSMUST00000129256 U2af1Q9D883 239 aaKnown RBP18.81■□□□□ 0.6
Vps53-204ENSMUST00000129256 Scn9aQ62205 1984 aa18.81■□□□□ 0.6
Vps53-204ENSMUST00000129256 Gpr101Q80T62 511 aa18.8■□□□□ 0.6
Vps53-204ENSMUST00000129256 Flad1Q8R123 492 aa18.8■□□□□ 0.6
Vps53-204ENSMUST00000129256 Prim1P20664 417 aa18.79■□□□□ 0.6
Vps53-204ENSMUST00000129256 Rtf1A2AQ19 715 aaKnown RBP18.78■□□□□ 0.6
Vps53-204ENSMUST00000129256 Dctn1O08788 1281 aa18.78■□□□□ 0.6
Vps53-204ENSMUST00000129256 Plekhg5Q66T02 1073 aa18.78■□□□□ 0.6
Vps53-204ENSMUST00000129256 Znf219Q6IQX8 726 aa18.78■□□□□ 0.6
Vps53-204ENSMUST00000129256 SowahdQ8BY98 327 aa18.78■□□□□ 0.6
Vps53-204ENSMUST00000129256 Nlrp6Q91WS2 869 aa18.78■□□□□ 0.6
Vps53-204ENSMUST00000129256 TefQ9JLC6 301 aa18.78■□□□□ 0.6
Vps53-204ENSMUST00000129256 Aebp2Q9Z248 504 aaKnown RBP18.78■□□□□ 0.6
Vps53-204ENSMUST00000129256 Pde4bB1AWC9 736 aa18.77■□□□□ 0.6
Vps53-204ENSMUST00000129256 Tbc1d32Q3URV1 1296 aa18.77■□□□□ 0.6
Vps53-204ENSMUST00000129256 Mrc1Q61830 1456 aa18.77■□□□□ 0.59
Vps53-204ENSMUST00000129256 PnnO35691 725 aaKnown RBP18.76■□□□□ 0.59
Vps53-204ENSMUST00000129256 Tnnt1O88346 262 aa18.76■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms