RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 Ccdc30Q8BVF4 654 aa18.23■□□□□ 0.51
Ccdc171-204ENSMUST00000126429 Nip7Q9CXK8 180 aaKnown RBP18.23■□□□□ 0.51
Ccdc171-204ENSMUST00000126429 Ankrd50F7BE84 1390 aa18.23■□□□□ 0.51
Ccdc171-204ENSMUST00000126429 Nav1Q8CH77 1875 aa18.22■□□□□ 0.51
Ccdc171-204ENSMUST00000126429 Zfp444Q3TDV8 331 aaKnown RBP18.22■□□□□ 0.51
Ccdc171-204ENSMUST00000126429 Prom2Q3UUY6 835 aa18.22■□□□□ 0.51
Ccdc171-204ENSMUST00000126429 Slc39a6Q8C145 765 aa18.22■□□□□ 0.51
Ccdc171-204ENSMUST00000126429 Col23a1Q8K4G2 532 aa18.22■□□□□ 0.51
Ccdc171-204ENSMUST00000126429 RtcbQ99LF4 505 aaKnown RBP18.22■□□□□ 0.51
Ccdc171-204ENSMUST00000126429 Gigyf1Q99MR1 1044 aaKnown RBP18.22■□□□□ 0.51
Ccdc171-204ENSMUST00000126429 MetP16056 1379 aa18.22■□□□□ 0.51
Ccdc171-204ENSMUST00000126429 Q3TQI7 289 aaKnown RBP18.21■□□□□ 0.51
Ccdc171-204ENSMUST00000126429 Znrd1-asQ8R0E5 213 aa18.21■□□□□ 0.51
Ccdc171-204ENSMUST00000126429 Cers3Q1A3B0 383 aa18.2■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Adgre1Q61549 931 aa18.2■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Tmem119Q8R138 280 aa18.2■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Tlr8P58682 1032 aa18.19■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 SympkQ80X82 1284 aa18.19■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 CpzQ8R4V4 654 aa18.19■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Rnaseh2aQ9CWY8 301 aa18.19■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Trip6Q9Z1Y4 480 aa18.19■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 C4bP01029 1738 aa18.19■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Ksr2Q3UVC0 959 aa18.18■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 HmcesQ8R1M0 353 aaKnown RBP18.18■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Sned1Q70E20 1403 aa18.18■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Igfbp6P47880 238 aa18.17■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Srp68Q8BMA6 625 aaKnown RBP18.17■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Amhr2Q8K592 568 aa18.17■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 CastP51125 788 aa18.17■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Atp1b3P97370 278 aa18.17■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Prr5lA2AVJ5 370 aa18.16■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Vamp4O70480 141 aa18.16■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Strn4P58404 760 aa18.16■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 PsapQ61207 557 aaKnown RBP18.16■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 NudcO35685 332 aaKnown RBP18.15■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Nsfl1cQ9CZ44 370 aaKnown RBP18.15■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Rapgef4Q9EQZ6 1011 aa18.15■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Dpf1Q9QX66 387 aa18.15■□□□□ 0.5
Ccdc171-204ENSMUST00000126429 Zfyve9A2A8R0 1397 aa18.14■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Ubr3Q5U430 1889 aa18.14■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Trim52Q8CDV4 233 aa18.14■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Anks4bQ8K3X6 423 aa18.14■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Erbb4Q61527 1308 aa18.13■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Ofd1Q80Z25 1017 aa18.13■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Ttll7A4Q9F0 912 aa18.12■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 1810065E05RikQ5NC41 235 aa18.12■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Esco1Q69Z69 843 aa18.12■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Spon1Q8VCC9 807 aa18.12■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Trim26Q99PN3 545 aa18.11■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Tktl2Q9D4D4 627 aa18.11■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Col11a2Q64739 1736 aa18.1■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Cnksr1A2A9K7 700 aa18.1■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Snai1Q02085 264 aa18.1■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Morc2aQ69ZX6 1030 aa18.1■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Ubn2Q80WC1 1314 aa18.1■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Dlg5E9Q9R9 1921 aa18.09■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Prr29B1ARI9 187 aa18.09■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Plekhh1Q80TI1 1356 aa18.08■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Gm6268A2A3U9 297 aa18.08■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Chl1P70232 1209 aa18.08■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Aplp1Q03157 653 aa18.08■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Ccar1Q8CH18 1146 aaKnown RBP18.08■□□□□ 0.49
Ccdc171-204ENSMUST00000126429 Cyp2c69E9PXC3 491 aa18.07■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Cyp2d11P24457 504 aa18.07■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Cyp2c40P56657 491 aa18.07■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 KarsQ99MN1 595 aaKnown RBP18.07■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Slurp2P0DP59 97 aa18.06■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Hspa2P17156 633 aa18.06■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 CoilQ5SU73 570 aa18.06■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Fam83gQ5SWY7 812 aa18.06■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Slf2Q6P9P0 1278 aa18.06■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 SnrkQ8VDU5 748 aa18.06■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Ssc5dQ8BV57 1371 aa18.06■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Plch1Q4KWH5 1682 aa18.06■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 SowahdQ8BY98 327 aa18.05■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Camkk2Q8C078 588 aa18.05■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Kank1E9Q238 1360 aa18.05■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Adam1aQ60813 791 aa18.04■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Rbm26Q6NZN0 1012 aaKnown RBP18.04■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Casz1Q9CWL2 1761 aa18.04■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Ankle2Q6P1H6 964 aa18.04■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Ccdc60Q8C4J0 545 aa18.04■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Nlrp3Q8R4B8 1033 aa18.04■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Ddx60E9PZQ1 1711 aa18.03■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Ifit1bl2Q3U687 466 aa18.03■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 BcorQ8CGN4 1759 aa18.02■□□□□ 0.48
Ccdc171-204ENSMUST00000126429 Irf9Q61179 399 aa18.02■□□□□ 0.47
Ccdc171-204ENSMUST00000126429 Sv2bQ8BG39 683 aa18.02■□□□□ 0.47
Ccdc171-204ENSMUST00000126429 Polr3glQ8R0C0 218 aa18.02■□□□□ 0.47
Ccdc171-204ENSMUST00000126429 Rangap1P46061 589 aaKnown RBP18.01■□□□□ 0.47
Ccdc171-204ENSMUST00000126429 Zbtb40Q6PCS8 1258 aa18.01■□□□□ 0.47
Ccdc171-204ENSMUST00000126429 Plekhm2Q80TQ5 1018 aa18.01■□□□□ 0.47
Ccdc171-204ENSMUST00000126429 Podxl2Q8CAE9 603 aa18.01■□□□□ 0.47
Ccdc171-204ENSMUST00000126429 Taf1dQ9D4V4 322 aa18.01■□□□□ 0.47
Ccdc171-204ENSMUST00000126429 Cyp2c23E9Q5K4 494 aa18■□□□□ 0.47
Ccdc171-204ENSMUST00000126429 Gnl3lQ6PGG6 577 aaKnown RBP18■□□□□ 0.47
Ccdc171-204ENSMUST00000126429 FktnQ8R507 461 aa18■□□□□ 0.47
Ccdc171-204ENSMUST00000126429 NgdnQ9DB96 315 aaKnown RBP18■□□□□ 0.47
Ccdc171-204ENSMUST00000126429 Ccdc171E9Q1U1 1324 aa18■□□□□ 0.47
Ccdc171-204ENSMUST00000126429 Akap2O54931 893 aa17.99■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 45.8 ms