RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Isy1Q69ZQ2 285 aaKnown RBP11.07□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Gigyf2Q6Y7W8 1291 aaKnown RBP11.07□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Serinc2Q8K0E7 450 aa11.07□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Trim8Q99PJ2 551 aa11.07□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Dnaja1P63037 397 aaKnown RBP11.07□□□□□ -0.64
Upf3b-201ENSMUST00000076265 MlecQ6ZQI3 291 aaKnown RBP11.07□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Sgsm3Q8VCZ6 750 aa11.07□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Tnfrsf10bQ9QZM4 381 aa11.07□□□□□ -0.64
Upf3b-201ENSMUST00000076265 AU022751B1B0V2 589 aa11.06□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Epas1P97481 874 aa11.06□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Spout1Q3UHX9 385 aaKnown RBP11.06□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Klhl23Q6GQU2 558 aa11.06□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Pip4k2bQ80XI4 416 aa11.06□□□□□ -0.64
Upf3b-201ENSMUST00000076265 LppQ8BFW7 613 aa11.06□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Znf131Q8K3J5 619 aa11.06□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Filip1Q9CS72 1211 aa11.06□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Sbno2Q7TNB8 1349 aa11.06□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Tspan6O70401 245 aa11.06□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Foxk1P42128 719 aaKnown RBP11.06□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Fdxacb1Q3UY23 622 aa11.06□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Casc1Q6TDU8 730 aa11.06□□□□□ -0.64
Upf3b-201ENSMUST00000076265 TtpalQ9D3D0 343 aa11.06□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Synj2Q9D2G5 1434 aa11.05□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Nhsl2B1AXH1 854 aa11.05□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Zfp850J3QPC5 689 aa11.05□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Kcna6Q61923 529 aa11.05□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Ccdc57Q6PHN1 1016 aa11.05□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Adam1bQ8R534 806 aa11.05□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Cd248Q91V98 765 aa11.05□□□□□ -0.64
Upf3b-201ENSMUST00000076265 BcamQ9R069 622 aa11.05□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Sptlc1O35704 473 aa11.04□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Rph3aP47708 681 aa11.04□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Naip1Q9QWK5 1403 aa11.04□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Ercc3P49135 783 aa11.04□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Eepd1Q3TGW2 569 aa11.04□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Ildr1Q8CBR1 537 aa11.04□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Synpo2Q91YE8 1087 aaKnown RBP11.04□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Nr1h3Q9Z0Y9 445 aa11.04□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Kcna2P63141 499 aa11.03□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Mctp2Q5RJH2 878 aa11.03□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Psmd2Q8VDM4 908 aa11.03□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Hdac9Q99N13 588 aa11.03□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Naip2Q9QUK4 1447 aa11.03□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Fam184aE9PW83 1143 aa11.03□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Nfxl1E9Q8I7 918 aaKnown RBP11.03□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Tcea3P23881 347 aaKnown RBP11.03□□□□□ -0.64
Upf3b-201ENSMUST00000076265 IbspQ61711 324 aa11.03□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Rapgef3Q8VCC8 918 aa11.03□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Kiaa0556Q8C753 1610 aa11.03□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Tnnt2P50752 301 aa11.02□□□□□ -0.64
Upf3b-201ENSMUST00000076265 G3bp2P97379 482 aaKnown RBP11.02□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Sfi1Q3UZY0 1216 aaKnown RBP11.02□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Abl2Q4JIM5 1182 aa11.02□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Cyp2c67Q569X9 491 aa11.02□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Bms1Q6PGF5 1284 aaKnown RBP11.02□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Fermt3Q8K1B8 665 aa11.02□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Fam13bQ8K2H3 851 aa11.02□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Nolc1E9Q5C9 702 aaKnown RBP11.02□□□□□ -0.65
Upf3b-201ENSMUST00000076265 VgfQ0VGU4 617 aa11.02□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Cep131Q62036 1060 aa11.02□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Wwc2Q6NXJ0 1187 aa11.02□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Fmnl3Q6ZPF4 1028 aa11.02□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Enox1Q8BHR2 643 aaKnown RBP11.02□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Tmcc3Q8R310 477 aa11.02□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Rrp15Q9CYX7 281 aaKnown RBP11.02□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Maged1Q9QYH6 775 aaKnown RBP11.02□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Arhgap5P97393 1501 aa11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Ncapd3Q6ZQK0 1506 aa11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 CblbQ3TTA7 982 aa11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Ice2Q3UZ18 988 aaKnown RBP11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Nol10Q5RJG1 687 aaKnown RBP11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Nlrp10Q8CCN1 673 aa11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Asb16Q8VHS5 453 aa11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Tcea2Q9QVN7 299 aa11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Hecw2Q6I6G8 1578 aa11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Kdm6bQ5NCY0 1641 aa11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Ccng2O08918 344 aa11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Map4P27546 1125 aaKnown RBP11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Drc7Q6V3W6 876 aa11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 SrlQ7TQ48 910 aa11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Smarcal1Q8BJL0 910 aa11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 LarsQ8BMJ2 1178 aa11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Zfp449Q8CB76 518 aa11.01□□□□□ -0.65
Upf3b-201ENSMUST00000076265 NexmifQ5DTT1 1515 aa11□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Ttll3A4Q9E5 927 aa11□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Ssfa2Q922B9 1252 aa11□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Trappc8E9PWG2 1437 aa11□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Tmf1B9EKI3 1091 aa11□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Pde6aP27664 859 aa11□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Rapgef1Q3UHC1 1224 aa11□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Cpa6Q5U901 438 aa11□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Cavin2Q63918 418 aaKnown RBP11□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Stox1B2RQL2 990 aa10.99□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Cald1E9QA15 768 aaKnown RBP10.99□□□□□ -0.65
Upf3b-201ENSMUST00000076265 CalrP14211 416 aaKnown RBP10.99□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Znf710Q3U288 666 aa10.99□□□□□ -0.65
Upf3b-201ENSMUST00000076265 L1td1Q587J6 782 aaKnown RBP10.99□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Sh3tc2Q80VA5 1289 aa10.99□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Bloc1s4Q8VED2 215 aa10.99□□□□□ -0.65
Upf3b-201ENSMUST00000076265 Lrrfip2Q91WK0 415 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms