RNA–Protein interactions for RNA: ENSMUST00000035340.13

Usp54-202, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-202ENSMUST00000035340 Xrcc4Q924T3 326 aa9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Efcab2Q9CQ46 164 aa9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Adgrl2Q8JZZ7 1487 aa9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Abcd1P48410 736 aa9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Plekhm2Q80TQ5 1018 aa9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Ncf1Q09014 390 aa9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Tmco3Q8BH01 678 aa9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Cog6Q8R3I3 657 aa9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 SrrtQ99MR6 875 aaKnown RBP9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Fam184aE9PW83 1143 aa9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Cnnm3Q32NY4 713 aa9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Glg1Q61543 1175 aaKnown RBP9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Atp2b4Q6Q477 1205 aa9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Ccdc150Q8CDI7 1110 aa9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Dnaaf4Q8R368 420 aa9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Znf518aB2RRF6 1478 aaKnown RBP9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Ccdc155Q80VJ8 648 aa9.03□□□□□ -0.96
Usp54-202ENSMUST00000035340 Nolc1E9Q5C9 702 aaKnown RBP9.02□□□□□ -0.96
Usp54-202ENSMUST00000035340 Sptbn5F6UCX4 1208 aa9.02□□□□□ -0.96
Usp54-202ENSMUST00000035340 Tbc1d2bQ3U0J8 965 aa9.02□□□□□ -0.96
Usp54-202ENSMUST00000035340 TxlnaQ6PAM1 554 aaKnown RBP9.02□□□□□ -0.96
Usp54-202ENSMUST00000035340 Nup88Q8CEC0 753 aaKnown RBP9.02□□□□□ -0.96
Usp54-202ENSMUST00000035340 Synj2Q9D2G5 1434 aa9.02□□□□□ -0.96
Usp54-202ENSMUST00000035340 Bag1Q60739 355 aa9.02□□□□□ -0.97
Usp54-202ENSMUST00000035340 Sh3tc1G3X9F6 1346 aa9.02□□□□□ -0.97
Usp54-202ENSMUST00000035340 Map3k2Q61083 619 aa9.02□□□□□ -0.97
Usp54-202ENSMUST00000035340 Samd9lQ69Z37 1561 aa9.02□□□□□ -0.97
Usp54-202ENSMUST00000035340 GnaqP21279 359 aa9.02□□□□□ -0.97
Usp54-202ENSMUST00000035340 Chpf2Q3UU43 768 aa9.02□□□□□ -0.97
Usp54-202ENSMUST00000035340 Larp1Q6ZQ58 1072 aaKnown RBP9.02□□□□□ -0.97
Usp54-202ENSMUST00000035340 Pm20d1Q8C165 503 aa9.02□□□□□ -0.97
Usp54-202ENSMUST00000035340 RarsQ9D0I9 660 aaKnown RBP9.02□□□□□ -0.97
Usp54-202ENSMUST00000035340 Prkar2bP31324 416 aa9.02□□□□□ -0.97
Usp54-202ENSMUST00000035340 Usp37Q8C0R0 979 aa9.02□□□□□ -0.97
Usp54-202ENSMUST00000035340 Pla2r1Q62028 1487 aa9.02□□□□□ -0.97
Usp54-202ENSMUST00000035340 DesP31001 469 aaKnown RBP9.01□□□□□ -0.97
Usp54-202ENSMUST00000035340 Cnnm2Q3TWN3 875 aa9.01□□□□□ -0.97
Usp54-202ENSMUST00000035340 Ppip5k2Q6ZQB6 1129 aa9.01□□□□□ -0.97
Usp54-202ENSMUST00000035340 Thoc2B1AZI6 1594 aaKnown RBP9.01□□□□□ -0.97
Usp54-202ENSMUST00000035340 RtcbQ99LF4 505 aaKnown RBP9.01□□□□□ -0.97
Usp54-202ENSMUST00000035340 Ccnl1Q52KE7 532 aaKnown RBP9.01□□□□□ -0.97
Usp54-202ENSMUST00000035340 NsmfQ99NF2 532 aa9.01□□□□□ -0.97
Usp54-202ENSMUST00000035340 Mybbp1aQ7TPV4 1344 aaKnown RBP9.01□□□□□ -0.97
Usp54-202ENSMUST00000035340 Cavin2Q63918 418 aaKnown RBP9.01□□□□□ -0.97
Usp54-202ENSMUST00000035340 Tmem67Q8BR76 992 aa9.01□□□□□ -0.97
Usp54-202ENSMUST00000035340 Krt25Q8VCW2 446 aa9.01□□□□□ -0.97
Usp54-202ENSMUST00000035340 Prdm11A2AGX3 565 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Cacna2d4Q5RJF7 1116 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Slc13a4Q8BZ82 625 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Pmfbp1Q9WVQ0 1022 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Gli2Q0VGT2 1544 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Arhgef12Q8R4H2 1543 aaKnown RBP9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Gnat2P50149 354 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Def6Q8C2K1 630 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Mrvi1Q9WUX5 899 aaKnown RBP9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Knop1Q9Z2Q2 478 aaKnown RBP9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Vps36Q91XD6 386 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Mipol1Q9D9F8 279 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Ces1hD3Z298 562 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Limch1Q3UH68 1057 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Morc2aQ69ZX6 1030 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Nol12Q8BG17 217 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Svs3aF2Z472 265 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Sde2Q8K1J5 448 aaKnown RBP9□□□□□ -0.97
Usp54-202ENSMUST00000035340 GptQ8QZR5 496 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Fam213aQ9CYH2 218 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Uchl5Q9WUP7 329 aa9□□□□□ -0.97
Usp54-202ENSMUST00000035340 Arid4aF8VPQ2 1261 aaKnown RBP8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 Fermt1P59113 677 aa8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 Tnpo1Q8BFY9 898 aaKnown RBP8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 Cfap53Q9D439 514 aa8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 VeztQ3ZK22 780 aa8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 Rbm17Q8JZX4 405 aaKnown RBP8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 Adgrl3Q80TS3 1537 aa8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 Slc27a3O88561 667 aa8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 NefhP19246 1090 aa8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 Nup160Q9Z0W3 1402 aaKnown RBP8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 WizO88286 1684 aaKnown RBP8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 Ncoa1P70365 1447 aa8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 PalldQ9ET54 1408 aa8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 DlatQ8BMF4 642 aa8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 Arhgef6Q8K4I3 771 aa8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 Kif21aQ9QXL2 1672 aa8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 Rusc2Q80U22 1514 aa8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 Skint5A7XUY5 1461 aa8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 Hdgfl1Q2VPR5 283 aa8.99□□□□□ -0.97
Usp54-202ENSMUST00000035340 Wdr33Q8K4P0 1330 aaKnown RBP8.98□□□□□ -0.97
Usp54-202ENSMUST00000035340 Anapc15-psA0A140T8L6 141 aa8.98□□□□□ -0.97
Usp54-202ENSMUST00000035340 Map9Q3TRR0 646 aa8.98□□□□□ -0.97
Usp54-202ENSMUST00000035340 Rdm1Q9CQK3 281 aa8.98□□□□□ -0.97
Usp54-202ENSMUST00000035340 Trappc8E9PWG2 1437 aa8.98□□□□□ -0.97
Usp54-202ENSMUST00000035340 Pafah1b1P63005 410 aaKnown RBP8.98□□□□□ -0.97
Usp54-202ENSMUST00000035340 P4ha1Q60715 534 aa8.98□□□□□ -0.97
Usp54-202ENSMUST00000035340 Nap1l4Q78ZA7 375 aaKnown RBP8.98□□□□□ -0.97
Usp54-202ENSMUST00000035340 Dnajc5bQ9CQ94 199 aa8.98□□□□□ -0.97
Usp54-202ENSMUST00000035340 ZwintQ9CQU5 252 aa8.98□□□□□ -0.97
Usp54-202ENSMUST00000035340 BC005561E9Q5E2 1589 aa8.98□□□□□ -0.97
Usp54-202ENSMUST00000035340 Abcc2Q8VI47 1543 aa8.98□□□□□ -0.97
Usp54-202ENSMUST00000035340 Mctp1E9PV86 951 aa8.98□□□□□ -0.97
Usp54-202ENSMUST00000035340 Calm1P0DP26 149 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms