RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 ZNF778Q96MU6 729 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 ZNF48Q96MX3 618 aaPredicted RBP4.64□□□□□ -1.67
LINC00397-202ENST00000606785 POLE3Q9NRF9 147 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 PIGVQ9NUD9 493 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 PLEKHA6Q9Y2H5 1048 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 NSG2Q9Y328 171 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 TMED7Q9Y3B3 224 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 RIPK3Q9Y572 518 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 AP1M2Q9Y6Q5 423 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 MYMKA6NI61 221 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 KPNA7A9QM74 516 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 PSMD3O43242 534 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 NOL3O60936 208 aaKnown RBP4.63□□□□□ -1.67
LINC00397-202ENST00000606785 ATP6V1G1O75348 118 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 GRAP2O75791 330 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 ZBTB11O95625 1053 aaPredicted RBP4.63□□□□□ -1.67
LINC00397-202ENST00000606785 CXCL10P02778 98 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 YES1P07947 543 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 NR1D1P20393 614 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 LHCGRP22888 699 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 SRD5A2P31213 254 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 FMO5P49326 533 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 DMP1Q13316 513 aaPredicted RBP4.63□□□□□ -1.67
LINC00397-202ENST00000606785 EPC2Q52LR7 807 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 PDLIM3Q53GG5 364 aaPredicted RBP4.63□□□□□ -1.67
LINC00397-202ENST00000606785 TAF1BQ53T94 588 aaPredicted RBP4.63□□□□□ -1.67
LINC00397-202ENST00000606785 HSP90AA5PQ58FG0 334 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 PRAMEF7Q5VXH5 474 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 C9orf47Q6ZRZ4 202 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 C1QL2Q7Z5L3 287 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 LCA5Q86VQ0 697 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 STHQ8IWL8 128 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 TMEM99Q8N816 258 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 METTL21AQ8WXB1 218 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 PIK3R3Q92569 461 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 HAS2Q92819 552 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 NEUROG1Q92886 237 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 SYAP1Q96A49 352 aaPredicted RBP4.63□□□□□ -1.67
LINC00397-202ENST00000606785 C14orf79Q96F83 325 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 C4orf45Q96LM5 186 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 BTBD9Q96Q07 612 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 CDCA3Q99618 268 aaPredicted RBP4.63□□□□□ -1.67
LINC00397-202ENST00000606785 SLC29A3Q9BZD2 475 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 CPVLQ9H3G5 476 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 RPF1Q9H9Y2 349 aaKnown RBP4.63□□□□□ -1.67
LINC00397-202ENST00000606785 PPANQ9NQ55 473 aaKnown RBP4.63□□□□□ -1.67
LINC00397-202ENST00000606785 ECHDC1Q9NTX5 307 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 SUN2Q9UH99 717 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 SH3GLB1Q9Y371 365 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 R4GN57 208 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 FAM205AQ6ZU69 1335 aa4.63□□□□□ -1.67
LINC00397-202ENST00000606785 TRBV5-5A0A0J9YX44 114 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 TULP2O00295 520 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 ATP6V0E1O15342 81 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 KIF5CO60282 957 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 OR6B1O95007 311 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 STBD1O95210 358 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 PTBP3O95758 552 aaKnown RBP4.62□□□□□ -1.67
LINC00397-202ENST00000606785 NR3C1P04150 777 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 NUDT17P0C025 328 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 CCDC172P0C7W6 258 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 DARSP14868 501 aaKnown RBP4.62□□□□□ -1.67
LINC00397-202ENST00000606785 PAX7P23759 505 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 CCND2P30279 289 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 CHRNA3P32297 505 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 ZNF132P52740 706 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 DSCR9P59020 149 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 UNC5DQ6UXZ4 953 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 MACC1Q6ZN28 852 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 SLC16A9Q7RTY1 509 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 OR4C15Q8NGM1 316 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 OR13C3Q8NGS6 347 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 OR4A16Q8NH70 328 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 SECTM1Q8WVN6 248 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 ALG14Q96F25 216 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 ZNF583Q96ND8 569 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 GUCD1Q96NT3 240 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 IL17FQ96PD4 163 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 RHNO1Q9BSD3 238 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 TMEM204Q9BSN7 226 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 LRRC2Q9BYS8 371 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 SHARPINQ9H0F6 387 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 NGBQ9NPG2 151 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 TMOD3Q9NYL9 352 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 IL36AQ9UHA7 158 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 MAN1B1Q9UKM7 699 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 TNNQ9UQP3 1299 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 NUDCQ9Y266 331 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 UBE4BO95155 1302 aa4.62□□□□□ -1.67
LINC00397-202ENST00000606785 IGLV9-49A0A0B4J1Y8 123 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 TRIM64CA6NLI5 447 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 TEX28O15482 410 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 PRKNO60260 465 aaPredicted RBP4.61□□□□□ -1.67
LINC00397-202ENST00000606785 CLN5O75503 358 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 IFNB1P01574 187 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 TPM2P07951 284 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 ZNF853P0CG23 659 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 KRT5P13647 590 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 LIFP15018 202 aa4.61□□□□□ -1.67
LINC00397-202ENST00000606785 CYP3A5P20815 502 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms