RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 TRIM36Q9NQ86 728 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 MCM8Q9UJA3 840 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 SLC7A11Q9UPY5 501 aa11.58□□□□□ -0.55
NEK9-210ENST00000557026 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.58□□□□□ -0.55
NEK9-210ENST00000557026 CAPN8A6NHC0 703 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 ENO4A6NNW6 628 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 CCT3P49368 545 aaKnown RBP11.58□□□□□ -0.56
NEK9-210ENST00000557026 CD47Q08722 323 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 CBFBQ13951 182 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 C1orf52Q8N6N3 182 aaKnown RBP11.58□□□□□ -0.56
NEK9-210ENST00000557026 UCN3Q969E3 161 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 COL21A1Q96P44 957 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 REEP4Q9H6H4 257 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 WDR45Q9Y484 360 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 SETD1AO15047 1707 aaKnown RBP11.58□□□□□ -0.56
NEK9-210ENST00000557026 BHMG1C9JSJ3 638 aaPredicted RBP11.58□□□□□ -0.56
NEK9-210ENST00000557026 GDI2P50395 445 aaKnown RBP11.58□□□□□ -0.56
NEK9-210ENST00000557026 DMWDQ09019 674 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 LMAN2Q12907 356 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 UBAP2LQ14157 1087 aaKnown RBP11.58□□□□□ -0.56
NEK9-210ENST00000557026 ZIK1Q3SY52 487 aaPredicted RBP11.58□□□□□ -0.56
NEK9-210ENST00000557026 TTMPQ5BVD1 217 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 SYCE2Q6PIF2 218 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 ARMCX6Q7L4S7 300 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 PIM3Q86V86 326 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 SLC39A11Q8N1S5 342 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 SPATA6LQ8N4H0 392 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 POC5Q8NA72 575 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 GNPDA2Q8TDQ7 276 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 RNF39Q9H2S5 420 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 CXorf56Q9H5V9 222 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 WASF2Q9Y6W5 498 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 LRP6O75581 1613 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 IGKV6D-21A0A0A0MT36 114 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 LEFTY1O75610 366 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 S100A7P31151 101 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 KCTD8Q6ZWB6 473 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 ZNF433Q8N7K0 673 aaPredicted RBP11.58□□□□□ -0.56
NEK9-210ENST00000557026 C2CD4AQ8NCU7 369 aaPredicted RBP11.58□□□□□ -0.56
NEK9-210ENST00000557026 TMIEQ8NEW7 156 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 OR13C4Q8NGS5 318 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 PHOSPHO1Q8TCT1 267 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 KCNN1Q92952 543 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 MPP4Q96JB8 637 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 AMDHD1Q96NU7 426 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 ORAI3Q9BRQ5 295 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 FBRSL1Q9HCM7 1045 aaKnown RBP11.58□□□□□ -0.56
NEK9-210ENST00000557026 GRHPRQ9UBQ7 328 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 KCNK6Q9Y257 313 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 PLEKHA6Q9Y2H5 1048 aa11.58□□□□□ -0.56
NEK9-210ENST00000557026 CBFA2T3O75081 653 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 ENTPD6O75354 484 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 EDN1P05305 212 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 SLC6A8P48029 635 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 XKP51811 444 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 ARHGAP8P85298 464 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 TARDBPQ13148 414 aaKnown RBP eCLIP11.57□□□□□ -0.56
NEK9-210ENST00000557026 RBM48Q5RL73 367 aaKnown RBP11.57□□□□□ -0.56
NEK9-210ENST00000557026 DDI2Q5TDH0 399 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 REEP3Q6NUK4 255 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 CLNKQ7Z7G1 428 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 SLC5A8Q8N695 610 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 VN1R2Q8NFZ6 395 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 BORCS5Q969J3 196 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 NPAS2Q99743 824 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 SLC17A9Q9BYT1 436 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 SLC17A7Q9P2U7 560 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 OARD1Q9Y530 152 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 MBLAC1A4D2B0 266 aaPredicted RBP11.57□□□□□ -0.56
NEK9-210ENST00000557026 M0R129 80 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 F8A1P23610 371 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 FOLR3P41439 243 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 MAGEA8P43361 318 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 GSCP56915 257 aaPredicted RBP11.57□□□□□ -0.56
NEK9-210ENST00000557026 NRG1Q02297 640 aaPredicted RBP11.57□□□□□ -0.56
NEK9-210ENST00000557026 Q8N9G6 341 aaPredicted RBP11.57□□□□□ -0.56
NEK9-210ENST00000557026 RAB39BQ96DA2 213 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 MMABQ96EY8 250 aaPredicted RBP11.57□□□□□ -0.56
NEK9-210ENST00000557026 C11orf24Q96F05 449 aaPredicted RBP11.57□□□□□ -0.56
NEK9-210ENST00000557026 PGAP3Q96FM1 320 aaPredicted RBP11.57□□□□□ -0.56
NEK9-210ENST00000557026 IMP4Q96G21 291 aaKnown RBP11.57□□□□□ -0.56
NEK9-210ENST00000557026 FRMD6Q96NE9 622 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 EHD1Q9H4M9 534 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 ANKRA2Q9H9E1 313 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 STOML2Q9UJZ1 356 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 MRPL42Q9Y6G3 142 aaKnown RBP11.57□□□□□ -0.56
NEK9-210ENST00000557026 A0A1W2PPM1 405 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 TBX18O95935 607 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 PDYNP01213 254 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 C8BP07358 591 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 PTGIRP43119 386 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 GJA8P48165 433 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 YPEL5P62699 121 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 KIR2DS3Q14952 304 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 ARHGAP19Q14CB8 494 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 OCLNQ16625 522 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 FAM131AQ6UXB0 335 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 HEATR4Q86WZ0 1026 aa11.57□□□□□ -0.56
NEK9-210ENST00000557026 ZC3H3Q8IXZ2 948 aaKnown RBP11.57□□□□□ -0.56
NEK9-210ENST00000557026 OR10H4Q8NGA5 316 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms