RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 C6orf52Q5T4I8 152 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 KLHL6Q8WZ60 621 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 ACADLP28330 430 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 CDK9P50750 372 aaKnown RBP16.74■□□□□ 0.27
PTPN21-208ENST00000556564 OR4D1Q15615 310 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 MLF2Q15773 248 aaPredicted RBP16.74■□□□□ 0.27
PTPN21-208ENST00000556564 NIPAL1Q6NVV3 410 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 NPAS3Q8IXF0 933 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 LRCH3Q96II8 777 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 SLC22A12Q96S37 553 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 EHD3Q9NZN3 535 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 ATXN10Q9UBB4 475 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 THRBP10828 461 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 OMPP47874 163 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 SCML4Q8N228 414 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 OR5AR1Q8NGP9 310 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 ZNF347Q96SE7 839 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 MRPL39Q9NYK5 338 aaKnown RBP16.74■□□□□ 0.27
PTPN21-208ENST00000556564 SSR3Q9UNL2 185 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 PADI2Q9Y2J8 665 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 RENP00797 406 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 EGFP01133 1207 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 GPIP06744 558 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 GMPRP36959 345 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 TNFRSF4P43489 277 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 XKP51811 444 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 NNATQ16517 81 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.73■□□□□ 0.27
PTPN21-208ENST00000556564 COLEC12Q5KU26 742 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 SPANXN4Q5MJ08 99 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 CLEC12AQ5QGZ9 265 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 FIGLAQ6QHK4 219 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 NXPE4Q6UWF7 544 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 SYVN1Q86TM6 617 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 PNPLA1Q8N8W4 532 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 PROS1P07225 676 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 IL12RB1P42701 662 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 OR9I1Q8NGQ6 314 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 ATOH1Q92858 354 aaPredicted RBP16.73■□□□□ 0.27
PTPN21-208ENST00000556564 PNPLA3Q9NST1 481 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 MOCS1Q9NZB8 636 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 RBM7Q9Y580 266 aaKnown RBP16.73■□□□□ 0.27
PTPN21-208ENST00000556564 FADS3Q9Y5Q0 445 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 IL3P08700 152 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 RPS15P62841 145 aaKnown RBP16.73■□□□□ 0.27
PTPN21-208ENST00000556564 TECRLQ5HYJ1 363 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 C9orf50Q5SZB4 431 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 UBE2J2Q8N2K1 259 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 SFRP1Q8N474 314 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 ANKRD27Q96NW4 1050 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 NEUROD4Q9HD90 331 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 TVP23BQ9NYZ1 205 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 OR52A4PA6NMU1 304 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 AURKAO14965 403 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 FDXRP22570 491 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 DNAJB13P59910 316 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 PTGES3Q15185 160 aaKnown RBP16.73■□□□□ 0.27
PTPN21-208ENST00000556564 SPANXN2Q5MJ10 180 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 TMEM214Q6NUQ4 689 aaKnown RBP16.73■□□□□ 0.27
PTPN21-208ENST00000556564 PARM1Q6UWI2 310 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 CHERPQ8IWX8 916 aaKnown RBP16.73■□□□□ 0.27
PTPN21-208ENST00000556564 TMIEQ8NEW7 156 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 PEX11GQ96HA9 241 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 MRPS26Q9BYN8 205 aaKnown RBP16.73■□□□□ 0.27
PTPN21-208ENST00000556564 IL1RAPQ9NPH3 570 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 UBR3Q6ZT12 1888 aa16.73■□□□□ 0.27
PTPN21-208ENST00000556564 ITGA3P26006 1051 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 BNIP1Q12981 228 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 OR7A2PQ8NGA2 310 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 CGREF1Q99674 301 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 PLEKHA1Q9HB21 404 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 F11P03951 625 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 CBLP22681 906 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 IL4RP24394 825 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 HRH2P25021 359 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 ABATP80404 500 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 MRPS21P82921 87 aaKnown RBP16.72■□□□□ 0.27
PTPN21-208ENST00000556564 KRR1Q13601 381 aaKnown RBP16.72■□□□□ 0.27
PTPN21-208ENST00000556564 PPP1R3AQ16821 1122 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 RABEPKQ7Z6M1 372 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 GPR26Q8NDV2 337 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 OR6K6Q8NGW6 343 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 TRIB3Q96RU7 358 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 REEP4Q9H6H4 257 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 CKLFQ9UBR5 152 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 CLEC4AQ9UMR7 237 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 RSL1D1O76021 490 aaKnown RBP16.72■□□□□ 0.27
PTPN21-208ENST00000556564 ARF5P84085 180 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 DUS1LQ6P1R4 473 aaKnown RBP16.72■□□□□ 0.27
PTPN21-208ENST00000556564 EPGNQ6UW88 154 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 CWH43Q9H720 699 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 TPD52L2O43399 206 aaKnown RBP16.72■□□□□ 0.27
PTPN21-208ENST00000556564 AK4P27144 223 aaPredicted RBP16.72■□□□□ 0.27
PTPN21-208ENST00000556564 DNASE1L1P49184 302 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 ARFIP1P53367 373 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 FAM189BP81408 668 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 CDK3Q00526 305 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 ISG20Q96AZ6 181 aaKnown RBP16.72■□□□□ 0.27
PTPN21-208ENST00000556564 IL26Q9NPH9 171 aa16.72■□□□□ 0.27
PTPN21-208ENST00000556564 SLC22A2O15244 555 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 353.2 ms