RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 GFAPP14136 432 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 CNTFP26441 200 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 AHRP35869 848 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 HNF4AP41235 474 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 MAGEA12P43365 314 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 PGDP52209 483 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 PWP1Q13610 501 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 XKR6Q5GH73 641 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 DCAF10Q5QP82 559 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 PRICKLE2Q7Z3G6 844 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 PDSS2Q86YH6 399 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 KRT78Q8N1N4 520 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 PLD6Q8N2A8 252 aaKnown RBP11.21□□□□□ -0.61
RAB5C-204ENST00000547517 CLEC1AQ8NC01 280 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 RHEBL1Q8TAI7 183 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 NT5CQ8TCD5 201 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 UBTD2Q8WUN7 234 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 CCT6BQ92526 530 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 SCYL1Q96KG9 808 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 MESP1Q9BRJ9 268 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 RBCK1Q9BYM8 510 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 TXLNGYQ9BZA5 131 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 CD244Q9BZW8 370 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 CPSF2Q9P2I0 782 aaKnown RBP11.21□□□□□ -0.61
RAB5C-204ENST00000547517 G3BP2Q9UN86 482 aaKnown RBP11.21□□□□□ -0.61
RAB5C-204ENST00000547517 NAALAD2Q9Y3Q0 740 aa11.21□□□□□ -0.61
RAB5C-204ENST00000547517 CCDC88CQ9P219 2028 aa11.21□□□□□ -0.62
RAB5C-204ENST00000547517 NUP210LQ5VU65 1888 aa11.21□□□□□ -0.62
RAB5C-204ENST00000547517 IDSB3KWA1 339 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 MAP2K7O14733 419 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 ZNF500O60304 480 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-204ENST00000547517 PRAMEF4O60810 478 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 JRKO75564 520 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 B3GALT4O96024 378 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 IGHEP01854 428 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 HEXBP07686 556 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 MTHFD2P13995 350 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 ACPPP15309 386 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 EPORP19235 508 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 CXCR2P25025 360 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 GCAP28676 217 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 OLR1P78380 273 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 SLC29A2Q14542 456 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 HERC3Q15034 1050 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 ACAP2Q15057 778 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 PFKFB4Q16877 469 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 TUBB8Q3ZCM7 444 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 DEFB134Q4QY38 66 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 TECRLQ5HYJ1 363 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 TOR1AIP1Q5JTV8 583 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 COLEC12Q5KU26 742 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 MFSD4BQ5TF39 518 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 PRAMEF9Q5VWM5 478 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 FAAH2Q6GMR7 532 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 TCTN3Q6NUS6 607 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 KIRREL2Q6UWL6 708 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 TMIGD1Q6UXZ0 262 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 ASB18Q6ZVZ8 466 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 ABHD13Q7L211 337 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 LAPTM4BQ86VI4 370 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 SHISA5Q8N114 240 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 FDCSPQ8NFU4 85 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 C8orf44Q96CB5 159 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 GPR78Q96P69 363 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 CAPS2Q9BXY5 557 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 EPB41L4BQ9H329 900 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 PRM3Q9NNZ6 103 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 ZNF358Q9NW07 568 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 GPR83Q9NYM4 423 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 XPR1Q9UBH6 696 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 OPTCQ9UBM4 332 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 SLC22A7Q9Y694 548 aa11.2□□□□□ -0.62
RAB5C-204ENST00000547517 COL6A6A6NMZ7 2263 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 CCDC189A1A4V9 331 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 K7EPI3 171 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 SLC28A2O43868 658 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 GALR3O60755 368 aaPredicted RBP11.19□□□□□ -0.62
RAB5C-204ENST00000547517 CEACAM4O75871 244 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 SNRPAP09012 282 aaKnown RBP11.19□□□□□ -0.62
RAB5C-204ENST00000547517 ALOX12P18054 663 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 CD22P20273 847 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 TNFRSF8P28908 595 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 XCR1P46094 333 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 EMP2P54851 167 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 ALDH18A1P54886 795 aaKnown RBP11.19□□□□□ -0.62
RAB5C-204ENST00000547517 RAB8AP61006 207 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 IRF8Q02556 426 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 EEF1A2Q05639 463 aaKnown RBP11.19□□□□□ -0.62
RAB5C-204ENST00000547517 CHIT1Q13231 466 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 DOC2AQ14183 400 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 SETDB1Q15047 1291 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 TSNAXIP1Q2TAA8 658 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 MINDY4Q4G0A6 757 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 ADNP2Q6IQ32 1131 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 ZNF605Q86T29 641 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 AFAP1L2Q8N4X5 818 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 EIF1ADQ8N9N8 165 aaKnown RBP11.19□□□□□ -0.62
RAB5C-204ENST00000547517 TRPV3Q8NET8 790 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 TTLQ8NG68 377 aa11.19□□□□□ -0.62
RAB5C-204ENST00000547517 OR11G2Q8NGC1 345 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 1034.7 ms