RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 MACC1Q6ZN28 852 aa16.96■□□□□ 0.31
RAB40C-205ENST00000539661 LGI4Q8N135 537 aa16.96■□□□□ 0.31
RAB40C-205ENST00000539661 MAGEB10Q96LZ2 347 aaPredicted RBP16.96■□□□□ 0.31
RAB40C-205ENST00000539661 MAPKAP1Q9BPZ7 522 aa16.96■□□□□ 0.31
RAB40C-205ENST00000539661 BARHL1Q9BZE3 327 aa16.96■□□□□ 0.31
RAB40C-205ENST00000539661 SEC14L4Q9UDX3 406 aa16.96■□□□□ 0.31
RAB40C-205ENST00000539661 FZD4Q9ULV1 537 aa16.96■□□□□ 0.31
RAB40C-205ENST00000539661 ZFP37Q9Y6Q3 630 aaPredicted RBP16.96■□□□□ 0.31
RAB40C-205ENST00000539661 ACSL4O60488 711 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 CBSLP0DN79 551 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 CBSP35520 551 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 ELOAQ14241 798 aaKnown RBP16.96■□□□□ 0.3
RAB40C-205ENST00000539661 Q5BKY6 102 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 TIGD3Q6B0B8 471 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 RFPL4BQ6ZWI9 263 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 NLRP8Q86W28 1048 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 ZFAND1Q8TCF1 268 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 SPPL2AQ8TCT8 520 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 OPALINQ96PE5 141 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 ZIC5Q96T25 663 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 NIPSNAP1Q9BPW8 284 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 CNPPD1Q9BV87 410 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 BOCQ9BWV1 1114 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 AP5M1Q9H0R1 490 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 LATS2Q9NRM7 1088 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 CLN6Q9NWW5 311 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 SATB2Q9UPW6 733 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 CMAHPQ9Y471 501 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 PRSS21Q9Y6M0 314 aa16.96■□□□□ 0.3
RAB40C-205ENST00000539661 ERVH48-1M5A8F1 160 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 TRIM3O75382 744 aaPredicted RBP16.95■□□□□ 0.3
RAB40C-205ENST00000539661 CLDN11O75508 207 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 CYP7B1O75881 506 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 PRAMEF1O95521 474 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 CPSF4O95639 269 aaKnown RBP16.95■□□□□ 0.3
RAB40C-205ENST00000539661 COX7A2P14406 83 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 SLC6A4P31645 630 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 TAF10Q12962 218 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 PTPRRQ15256 657 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 PLCZ1Q86YW0 608 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 WDR36Q8NI36 951 aaKnown RBP16.95■□□□□ 0.3
RAB40C-205ENST00000539661 BBS2Q9BXC9 721 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 ROGDIQ9GZN7 287 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 THSD1Q9NS62 852 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 ABCB8Q9NUT2 735 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 RLIMQ9NVW2 624 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 TAS2R16Q9NYV7 291 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 KLHL21Q9UJP4 597 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 MAPRE3Q9UPY8 281 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 TRBV5-4A0A0C4DH59 114 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 A0A0U1RQF3 1178 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 MYADML2A6NDP7 307 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 ZNF670-ZNF695F2Z2N8 137 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 FZD6O60353 706 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 MYL9P24844 172 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 PKLRP30613 574 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 ZNF33BQ06732 778 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 TP53BP2Q13625 1128 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 DSC3Q14574 896 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 TRIM60Q495X7 471 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 ZMAT1Q5H9K5 638 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 C11orf74Q86VG3 221 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 C1orf52Q8N6N3 182 aaKnown RBP16.95■□□□□ 0.3
RAB40C-205ENST00000539661 GDPD1Q8N9F7 314 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 C11orf65Q8NCR3 313 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 EID2BQ96D98 161 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 FRMD6Q96NE9 622 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 TRAF4Q9BUZ4 470 aaPredicted RBP16.95■□□□□ 0.3
RAB40C-205ENST00000539661 TTLL2Q9BWV7 592 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 HHATLQ9HCP6 504 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 STMN3Q9NZ72 180 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 NUFIP1Q9UHK0 495 aaKnown RBP16.95■□□□□ 0.3
RAB40C-205ENST00000539661 BTNL2Q9UIR0 455 aa16.95■□□□□ 0.3
RAB40C-205ENST00000539661 F8W810 466 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 TFECO14948 347 aaPredicted RBP16.94■□□□□ 0.3
RAB40C-205ENST00000539661 CCNB2O95067 398 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 IGHA2P01877 340 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 RHOCP08134 193 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 ITGALP20701 1170 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 SPIBQ01892 262 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 FCHO2Q0JRZ9 810 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 GLYR1Q49A26 553 aaPredicted RBP16.94■□□□□ 0.3
RAB40C-205ENST00000539661 IFI44LQ53G44 452 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 FAM151BQ6UXP7 276 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 MBOAT1Q6ZNC8 495 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 FYTTD1Q96QD9 318 aaKnown RBP16.94■□□□□ 0.3
RAB40C-205ENST00000539661 MMP28Q9H239 520 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 ASB8Q9H765 288 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 NMRK2Q9NPI5 230 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 KLHL42Q9P2K6 505 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 B4DXG7 233 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 GAPDHSO14556 408 aaPredicted RBP16.94■□□□□ 0.3
RAB40C-205ENST00000539661 NBNO60934 754 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 ZNF865P0CJ78 1059 aaPredicted RBP16.94■□□□□ 0.3
RAB40C-205ENST00000539661 PSMA1P25786 263 aaKnown RBP16.94■□□□□ 0.3
RAB40C-205ENST00000539661 ITGB7P26010 798 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 ACRV1P26436 265 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 RPIAP49247 311 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 KCNQ1P51787 676 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 NFATC2Q13469 925 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms