RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 ZNF888P0CJ79 500 aaPredicted RBP12.9□□□□□ -0.34
FDPS-219ENST00000495308 TAC1P20366 129 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 CXCR2P25025 360 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 CASP2P42575 452 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 RGS1Q08116 209 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 ZNF844Q08AG5 666 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 HYAL2Q12891 473 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 PWP1Q13610 501 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 TBCCQ15814 346 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 NKG7Q16617 165 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 NDUFA9Q16795 377 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 KRT71Q3SY84 523 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 TOR1AIP1Q5JTV8 583 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 SHISA6Q6ZSJ9 500 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 OVCH1Q7RTY7 1134 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 VN1R5Q7Z5H4 357 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 SYVN1Q86TM6 617 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 TRABD2AQ86V40 505 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 MYLK4Q86YV6 388 aaPredicted RBP12.9□□□□□ -0.34
FDPS-219ENST00000495308 SRRM1Q8IYB3 904 aaKnown RBP12.9□□□□□ -0.34
FDPS-219ENST00000495308 AMER3Q8N944 861 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 TRPV3Q8NET8 790 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 NT5CQ8TCD5 201 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 CREB3L4Q8TEY5 395 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 CCT6BQ92526 530 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 FKBP10Q96AY3 582 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 MVB12AQ96EY5 273 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 ZIM3Q96PE6 472 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 EFCAB11Q9BUY7 163 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 YIPF2Q9BWQ6 316 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 KLHL31Q9H511 634 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 SOX17Q9H6I2 414 aaPredicted RBP12.9□□□□□ -0.34
FDPS-219ENST00000495308 NT5DC2Q9H857 520 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 IPPKQ9H8X2 491 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 COPG2Q9UBF2 871 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 RALYQ9UKM9 306 aaKnown RBP12.9□□□□□ -0.34
FDPS-219ENST00000495308 PADI2Q9Y2J8 665 aa12.9□□□□□ -0.34
FDPS-219ENST00000495308 SPENQ96T58 3664 aaKnown RBP12.9□□□□□ -0.34
FDPS-219ENST00000495308 ZNF860A6NHJ4 632 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 SGK494L7N484 410 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 RDH16O75452 317 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 ERLIN1O75477 346 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 ONECUT2O95948 504 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 PROCP04070 461 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 RPS17P08708 135 aaKnown RBP12.89□□□□□ -0.35
FDPS-219ENST00000495308 PIM1P11309 404 aaPredicted RBP12.89□□□□□ -0.35
FDPS-219ENST00000495308 PCNAP12004 261 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 TSPAN8P19075 237 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 HNRNPH1P31943 449 aaKnown RBP12.89□□□□□ -0.35
FDPS-219ENST00000495308 ARL1P40616 181 aaPredicted RBP12.89□□□□□ -0.35
FDPS-219ENST00000495308 FOLR3P41439 243 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 AVPR1BP47901 424 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 PIK3CGP48736 1102 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 RAB8AP61006 207 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 MAT1AQ00266 395 aaKnown RBP12.89□□□□□ -0.35
FDPS-219ENST00000495308 MC1RQ01726 317 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 SLC18A2Q05940 514 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 LAPTM5Q13571 262 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 DSG2Q14126 1118 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 FAM53BQ14153 422 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 E2F2Q14209 437 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 HIST2H2ACQ16777 129 aaPredicted RBP12.89□□□□□ -0.35
FDPS-219ENST00000495308 UGT8Q16880 541 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 DEFB109BQ30KR1 87 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 PAGE2BQ5JRK9 111 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 FAM219BQ5XKK7 198 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 HIST2H2AA3Q6FI13 130 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 GRHL2Q6ISB3 625 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 PRSS58Q8IYP2 241 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 RNF175Q8N4F7 328 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 OR52B6Q8NGF0 335 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 CDK15Q96Q40 435 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 TMEM237Q96Q45 408 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 TMEM109Q9BVC6 243 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 SLC6A16Q9GZN6 736 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 NOL11Q9H8H0 719 aaKnown RBP12.89□□□□□ -0.35
FDPS-219ENST00000495308 ACTR8Q9H981 624 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 ANKHQ9HCJ1 492 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 ZBTB26Q9HCK0 441 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 PRM3Q9NNZ6 103 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 SEMA4BQ9NPR2 832 aaPredicted RBP12.89□□□□□ -0.35
FDPS-219ENST00000495308 HCN3Q9P1Z3 774 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 CDC14AQ9UNH5 594 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 NAALAD2Q9Y3Q0 740 aa12.89□□□□□ -0.35
FDPS-219ENST00000495308 A0A0G2JN53 185 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 CCDC151A5D8V7 595 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 ANKDD1BA6NHY2 528 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 G3V2L1 256 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 PRPF4O43172 522 aaKnown RBP eCLIP12.88□□□□□ -0.355e-9■■□□□ 11.4
FDPS-219ENST00000495308 PLIN3O60664 434 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 SPAG7O75391 227 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 KLHL18O94889 574 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 NSA2O95478 260 aaKnown RBP12.88□□□□□ -0.35
FDPS-219ENST00000495308 TBX6O95947 436 aaPredicted RBP12.88□□□□□ -0.35
FDPS-219ENST00000495308 UMODP07911 640 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 SERPINA6P08185 405 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 ALOX12P18054 663 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 ATP5F1P24539 256 aaPredicted RBP12.88□□□□□ -0.35
FDPS-219ENST00000495308 OTX2P32243 289 aa12.88□□□□□ -0.35
FDPS-219ENST00000495308 CRHR1P34998 444 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms